Jatropha Genome Database

JcCB0292551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0292551.10 - phase: 0 /partial
         (260 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01025340001 assembled CDS                                       331   2e-91
GSVIVT01025339001 assembled CDS                                       325   1e-89
GSVIVT01025341001 assembled CDS                                       324   2e-89
GSVIVT01025342001 assembled CDS                                       313   4e-86
GSVIVT01010359001 assembled CDS                                       250   4e-67
GSVIVT01032029001 assembled CDS                                       246   9e-66
GSVIVT01016738001 assembled CDS                                       225   1e-59
GSVIVT01000084001 assembled CDS                                       216   1e-56
GSVIVT01005215001 assembled CDS                                       139   1e-33
GSVIVT01000083001 assembled CDS                                        91   6e-19
GSVIVT01017943001 assembled CDS                                        51   6e-07

>GSVIVT01025340001 assembled CDS
          Length = 872

 Score =  331 bits (849), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 157/235 (66%), Positives = 183/235 (77%)

Query: 1   MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
           +A EDPTA HGL+L IEDYPFA DGL+L DA+K WV+DYVN+Y+ +AS V SD ELQ WW
Sbjct: 622 IAVEDPTAPHGLKLLIEDYPFANDGLILWDALKQWVADYVNYYYKDASMVQSDPELQAWW 681

Query: 61  EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQYPFAGYFPNRPT 120
            E+RTKGH DKKDEPWWPVLKT  DL  ++TTI+WV S   +AVNFGQY FAGYFPNRPT
Sbjct: 682 TEIRTKGHEDKKDEPWWPVLKTPEDLIGIITTIVWVASAHDSAVNFGQYAFAGYFPNRPT 741

Query: 121 IARTNMPTEEPSQQEFERFLKKPEVFPLQCFPSQKQATKVTVILDVPSSHSPDEEYIGNT 180
           IARTNMP+E+P+++ ++RFL  PE   L CFPSQ QATKV  ILDV S+HSPDEEY+G  
Sbjct: 742 IARTNMPSEDPTREGWKRFLDNPEFELLVCFPSQIQATKVMAILDVLSNHSPDEEYLGEH 801

Query: 181 LEPSWEPNPVIKVAYERFWATLKELEATIDERNNNLKNTNRAGAGVVPYELLKPL 235
           +EP+W   PVIK A+ERF A LKEL   ID RN +    NR GAGVVPYELLKP 
Sbjct: 802 MEPAWGEEPVIKEAFERFSAKLKELGVIIDSRNADDSLKNRGGAGVVPYELLKPF 856


>GSVIVT01025339001 assembled CDS
          Length = 901

 Score =  325 bits (833), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 150/235 (63%), Positives = 182/235 (77%)

Query: 1   MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
           +A EDP++ HGL+LAI DYPFA DGL+L DAIK WV+DYVN ++ +AS V SD ELQ WW
Sbjct: 651 IAVEDPSSPHGLKLAIPDYPFANDGLLLWDAIKEWVTDYVNFFYKDASMVKSDAELQAWW 710

Query: 61  EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQYPFAGYFPNRPT 120
            E+RT+GH DKKDE WWP LKT  DL  ++TT++WVTSG HAAVNFGQY +AGYFPNRPT
Sbjct: 711 TEIRTRGHEDKKDETWWPDLKTPQDLIGIVTTMVWVTSGHHAAVNFGQYAYAGYFPNRPT 770

Query: 121 IARTNMPTEEPSQQEFERFLKKPEVFPLQCFPSQKQATKVTVILDVPSSHSPDEEYIGNT 180
           IARTN+P+E+P+++ + RFL KPE   L C P+Q QA KV  +LDV SSHSPDEEY+G  
Sbjct: 771 IARTNLPSEDPTEEGWRRFLHKPENELLACLPTQLQAAKVLTVLDVLSSHSPDEEYLGEH 830

Query: 181 LEPSWEPNPVIKVAYERFWATLKELEATIDERNNNLKNTNRAGAGVVPYELLKPL 235
           LEP+W  +P+IK A+ERF   LKE+E  ID RN +    NR GAGVVPYELLKP 
Sbjct: 831 LEPAWGADPLIKAAFERFSGRLKEIEGIIDARNEDKNLKNRHGAGVVPYELLKPF 885


>GSVIVT01025341001 assembled CDS
          Length = 2408

 Score =  324 bits (831), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 154/235 (65%), Positives = 180/235 (76%)

Query: 1    MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
            +A EDP+A HGL+L IEDYPFA DGL+L DA+K WV+DYVN+Y+ +AS V SD ELQ WW
Sbjct: 2158 IAVEDPSASHGLKLLIEDYPFANDGLILWDALKQWVADYVNYYYKDASMVQSDPELQAWW 2217

Query: 61   EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQYPFAGYFPNRPT 120
             E+RTKGH DKKDEPWWPVL+T  DL  ++ TI WV S  H+AVNFGQY FA YFPNRPT
Sbjct: 2218 TEIRTKGHEDKKDEPWWPVLQTPEDLIGIIATIAWVASAHHSAVNFGQYAFAAYFPNRPT 2277

Query: 121  IARTNMPTEEPSQQEFERFLKKPEVFPLQCFPSQKQATKVTVILDVPSSHSPDEEYIGNT 180
            IARTNMP+E+P+++ ++RFL  P    L CFPSQ QATKV  ILDV S+HSPDEEYIG  
Sbjct: 2278 IARTNMPSEDPTREGWKRFLDNPHFELLVCFPSQVQATKVIAILDVLSNHSPDEEYIGEY 2337

Query: 181  LEPSWEPNPVIKVAYERFWATLKELEATIDERNNNLKNTNRAGAGVVPYELLKPL 235
            +EP+W   P IK A+ERF A LKELE  ID RN +    NR GAGVVPYELLKP 
Sbjct: 2338 MEPAWGEEPDIKEAFERFSARLKELEVIIDARNADNSLKNRGGAGVVPYELLKPF 2392



 Score =  182 bits (463), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/182 (52%), Positives = 116/182 (63%), Gaps = 39/182 (21%)

Query: 1    MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
            +A EDPTA HGL+L I DYPFA DGL+L DA+K WV+DYVN+Y+  AS V SD ELQ WW
Sbjct: 1331 IAIEDPTAPHGLKLLIADYPFANDGLVLWDALKQWVADYVNYYYKNASMVQSDPELQAWW 1390

Query: 61   EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQYPFAGYFPNRPT 120
             E+RTK                                    AVNFGQY FAGYFPNRPT
Sbjct: 1391 TEIRTK------------------------------------AVNFGQYAFAGYFPNRPT 1414

Query: 121  IARTNMPTEEPSQQEFERFLKKPEVFPLQCFPSQKQATKVTVILDVPSSHSPDEEYIGNT 180
            IAR NMP E+P+++E++++   P+   L CFPSQ QATKV  ILDV S+HSPDEEY+G  
Sbjct: 1415 IARINMPCEDPTKEEWKQY---PDSELLVCFPSQIQATKVMAILDVLSNHSPDEEYLGKH 1471

Query: 181  LE 182
            ++
Sbjct: 1472 MD 1473



 Score =  140 bits (352), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 62/98 (63%), Positives = 77/98 (78%)

Query: 1   MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
           +A EDP A HGL+L IEDYPFA DGL+L DA+K WV+DYVN+Y+ +A+ V SD ELQ WW
Sbjct: 592 IAVEDPDAPHGLKLLIEDYPFANDGLVLWDALKQWVADYVNYYYKDANMVQSDPELQAWW 651

Query: 61  EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTS 98
            E++TKGH DKKDEPWWP L+T  DL  ++TTI W +S
Sbjct: 652 TEIQTKGHEDKKDEPWWPNLQTPNDLIGIITTITWHSS 689



 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 53/82 (64%)

Query: 152 PSQKQATKVTVILDVPSSHSPDEEYIGNTLEPSWEPNPVIKVAYERFWATLKELEATIDE 211
           P+ +    +  I+   + HS DEEY+G   + +W+  PVIK A+ RF A L+ELE TID+
Sbjct: 669 PNLQTPNDLIGIITTITWHSSDEEYLGKDRKLTWDEEPVIKEAFNRFSAKLEELERTIDD 728

Query: 212 RNNNLKNTNRAGAGVVPYELLK 233
           RN +    NR GAGVVPYELLK
Sbjct: 729 RNKDNSLKNRNGAGVVPYELLK 750


>GSVIVT01025342001 assembled CDS
          Length = 817

 Score =  313 bits (803), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 154/254 (60%), Positives = 189/254 (74%), Gaps = 3/254 (1%)

Query: 1   MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
           +A EDP A HGL+L IEDYPFA DGL+L DA+K WV+DYVN+Y+ +AS V SD ELQ WW
Sbjct: 562 IAVEDPDAPHGLKLLIEDYPFANDGLILWDALKQWVADYVNYYYKDASMVQSDPELQAWW 621

Query: 61  EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQYPFAGYFPNRPT 120
            E+RTKGH DKKDEPWWP L+T  DL  ++TTI WVTSG H+AVNFGQY FAGYFPNRP+
Sbjct: 622 TEIRTKGHEDKKDEPWWPNLQTPDDLIGIITTITWVTSGHHSAVNFGQYAFAGYFPNRPS 681

Query: 121 IARTNMPTEEPSQQEFERFLKKPEVFPLQCFPSQKQATKVTVILDVPSSHSPDEEYIGNT 180
           IARTNMP EEP+++ ++RFL  P    L CFPS+ QAT++   LD+ S HS DEEYIG  
Sbjct: 682 IARTNMPCEEPTEEGWQRFLDNPNSELLACFPSKLQATRIMATLDLLSEHSSDEEYIGKD 741

Query: 181 LEPSWEPNPVIKVAYERFWATLKELEATIDERNNNLKNTNRAGAGVVPYELLKPLE---R 237
            + +W+  PVIK A+ RF A L+ELE TID+RN +    NR GAGVVPYELLK L+   R
Sbjct: 742 RKLTWDEEPVIKEAFNRFSAKLEELERTIDDRNKDNSLKNRNGAGVVPYELLKGLKCIHR 801

Query: 238 EFLIVFLSNFSFSV 251
            +L+  L+  S S+
Sbjct: 802 LYLVCCLNICSDSL 815


>GSVIVT01010359001 assembled CDS
          Length = 920

 Score =  250 bits (639), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 120/236 (50%), Positives = 159/236 (67%), Gaps = 4/236 (1%)

Query: 1   MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
           MA EDP+   G++L IEDYP+A DGL++  AIK WV  YV+H++SE + V SD ELQ WW
Sbjct: 670 MAVEDPSMPCGVKLLIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNTVTSDLELQAWW 729

Query: 61  EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQYPFAGYFPNRPT 120
            E++ +GH DK++E WWP L T+  L  +LTT+IW+ SG HAA+NFGQYPF GY PNRPT
Sbjct: 730 NEIKNEGHYDKRNESWWPKLNTKEHLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPT 789

Query: 121 IARTNMPTEEPSQQEFERFLKKPEVFPLQCFPSQKQATKVTVILDVPSSHSPDEEYIGNT 180
           + R  +P E+ S   +E+FL  P+   L   P+Q QATKV  + D  S+HSPDEEY+G T
Sbjct: 790 LMRKLIPHEDDSA--YEKFLLNPQSTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQT 847

Query: 181 --LEPSWEPNPVIKVAYERFWATLKELEATIDERNNNLKNTNRAGAGVVPYELLKP 234
             L   W  +P +   +++F A L+E+E  I  RN N+   NR GAG+ PYELL P
Sbjct: 848 HHLHSHWIKDPEVLDMFKKFSAKLEEIEEIIKGRNKNIHLKNRNGAGIPPYELLLP 903


>GSVIVT01032029001 assembled CDS
          Length = 866

 Score =  246 bits (627), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 114/149 (76%), Positives = 126/149 (84%)

Query: 1   MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
           MA EDPTAEHGL+L IEDYPFA DGL+L DAIK WV DYVNHY+ + S V SD ELQGWW
Sbjct: 679 MAVEDPTAEHGLKLTIEDYPFANDGLVLWDAIKQWVRDYVNHYYPDPSLVESDKELQGWW 738

Query: 61  EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQYPFAGYFPNRPT 120
            EVRTKGHADKKDEPWWPV+KT  DL  VLTTIIWVT+G HAAVNFGQY +AGYFPNRPT
Sbjct: 739 TEVRTKGHADKKDEPWWPVMKTPEDLIHVLTTIIWVTAGHHAAVNFGQYVYAGYFPNRPT 798

Query: 121 IARTNMPTEEPSQQEFERFLKKPEVFPLQ 149
           IARTNMPTE+PS +EF+ FL KPE+  L+
Sbjct: 799 IARTNMPTEDPSDEEFKNFLHKPEIALLK 827


>GSVIVT01016738001 assembled CDS
          Length = 927

 Score =  225 bits (574), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 113/236 (47%), Positives = 147/236 (62%), Gaps = 5/236 (2%)

Query: 1   MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
           MA  DP   HGL+L IEDYP+A DGL++  AI++WV  YV HY+   S V SD ELQ W+
Sbjct: 667 MAVPDPAQPHGLKLLIEDYPYANDGLLIWRAIENWVKTYVAHYYPSPSVVISDRELQAWY 726

Query: 61  EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQYPFAGYFPNRPT 120
            E    GHAD +   WWP L T  DL  +LTT+IW+ S  HAA+NFGQYP+ GY PNRP 
Sbjct: 727 SEAVNVGHADLRHAAWWPSLSTPDDLASILTTLIWLASAQHAALNFGQYPYGGYVPNRPP 786

Query: 121 IARTNMPTEEPSQQEFERFLKKPEVFPLQCFPSQKQATKVTVILDVPSSHSPDEEYIGNT 180
           + R  +P  EP+  E+  FL  P+ + L   P   Q+T    ++D  S+HSPDEEYIG  
Sbjct: 787 LMRRLIP--EPTDPEYTNFLNDPQRYYLSALPGVLQSTSFMAVVDTLSTHSPDEEYIGER 844

Query: 181 LEPS-WEPNP-VIKVAYERFWATLKELEATIDERNNNLKNTNRAGAGVVPYELLKP 234
             PS W  +  +I+ +YE F A ++ +E  I++RN      NR GAGV+PYELL P
Sbjct: 845 NHPSTWSGDAEIIEASYE-FSAEIRRIEKEIEKRNAEFSRRNRCGAGVLPYELLAP 899


>GSVIVT01000084001 assembled CDS
          Length = 900

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 108/234 (46%), Positives = 139/234 (59%), Gaps = 2/234 (0%)

Query: 1   MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
           MA ED  A HGL L I+DYP+A DGL +  AI+ WV +Y + Y+     V  D ELQ WW
Sbjct: 652 MAVEDSEAPHGLRLLIDDYPYAVDGLEIWSAIETWVKEYCSFYYKTDEMVQKDSELQSWW 711

Query: 61  EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQYPFAGYFPNRPT 120
           +EVR +GH DKKDEPWWP + T  +L +  T IIWV S LHAAVNFGQYP+AGY PNRPT
Sbjct: 712 KEVREEGHGDKKDEPWWPKMHTVKELIETCTIIIWVASALHAAVNFGQYPYAGYLPNRPT 771

Query: 121 IARTNMPTEEPSQQEFERFLKKPEVFPLQCFPSQKQATKVTVILDVPSSHSPDEEYIGNT 180
           I+R  MP E     E+E     P+   L+   +Q Q      ++++ S HS DE Y+G  
Sbjct: 772 ISRRFMPEE--GTPEYEELKSNPDKAFLKTITAQLQTLLGISLIEILSRHSSDEVYLGQR 829

Query: 181 LEPSWEPNPVIKVAYERFWATLKELEATIDERNNNLKNTNRAGAGVVPYELLKP 234
             P W  +     A+E+F   L ++E  I +RN N +  NR G   +PY LL P
Sbjct: 830 DTPEWTLDTTPLKAFEKFGRKLADIEERIIDRNGNERFKNRVGPVKIPYTLLYP 883


>GSVIVT01005215001 assembled CDS
          Length = 533

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 117/235 (49%), Gaps = 46/235 (19%)

Query: 1   MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
           +A  D T  HGL L IEDYP+A DGL++  +I+  V  YVN+Y+S+A  + SD ELQ W+
Sbjct: 327 VAVPDTTKVHGLRLLIEDYPYANDGLLIWSSIESLVQTYVNYYYSDAEMIESDTELQAWY 386

Query: 61  EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQYPFAGYFPNRPT 120
            E R+                                           YP+ G+ P RP 
Sbjct: 387 NESRS-------------------------------------------YPYGGFIPARPP 403

Query: 121 IARTNMPTEEPSQQEFERFLKKPEVFPLQCFPSQKQATKVTVILDVPSSHSPDEEYIGNT 180
           + R  +P E      +  F++ P+ + L   PS  QATK   ++++ S+HSPDEEY+G  
Sbjct: 404 LMRQLVPKEH--DPVYVDFIEDPQAYFLSSLPSLLQATKFMAVIEIISAHSPDEEYLGER 461

Query: 181 LEPS-WEPNPVIKVAYERFWATLKELEATIDERNNNLKNTNRAGAGVVPYELLKP 234
            + S W  +  I  A+ RF   ++ +E  I++RN +    NR GAG+ PY+LL P
Sbjct: 462 KDLSTWSGDTEIIEAFYRFSVEIRRIEKEIEKRNADTSRRNRCGAGISPYKLLIP 516


>GSVIVT01000083001 assembled CDS
          Length = 738

 Score = 90.5 bits (223), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 56/108 (51%), Gaps = 31/108 (28%)

Query: 1   MAEEDPTAEHGLELAIEDYPFAKDGLMLCDAIKHWVSDYVNHYFSEASQVASDCELQGWW 60
           MA ED  A HGL L I+DYP+A DGL +  AI+ W                         
Sbjct: 611 MAVEDSEAPHGLRLLIDDYPYAVDGLEIWSAIETW------------------------- 645

Query: 61  EEVRTKGHADKKDEPWWPVLKTQADLFQVLTTIIWVTSGLHAAVNFGQ 108
                 GH DKKDEPWWP ++T  +L +  T IIWV S LHAAVNFGQ
Sbjct: 646 ------GHGDKKDEPWWPKMRTVKELIETCTIIIWVASALHAAVNFGQ 687


>GSVIVT01017943001 assembled CDS
          Length = 751

 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%)

Query: 141 KKPEVFPLQCFPSQKQATKVTVILDVPSSHSPDEEYIGNTLEPSWEPNPVIKVAYERFWA 200
           + P++  L+   +Q Q      ++++ S HS DE Y+G    P W  +     A+ERF +
Sbjct: 660 RNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEIYLGQRDTPEWTSDAEPLAAFERFGS 719

Query: 201 TLKELEATIDERNNNLKNTNRAGAGV 226
            L+ +E  I++ N + +  NR G G+
Sbjct: 720 RLRGIETRINQMNQDRRWNNRFGPGI 745