Jatropha Genome Database

JcCB0286581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0286581.10 - phase: 0 
         (232 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01023920001 assembled CDS                                       393   e-110
GSVIVT01008688001 assembled CDS                                       375   e-105
GSVIVT01025695001 assembled CDS                                       322   1e-88
GSVIVT01025206001 assembled CDS                                       321   2e-88
GSVIVT01033934001 assembled CDS                                       317   4e-87
GSVIVT01009880001 assembled CDS                                       311   2e-85
GSVIVT01035377001 assembled CDS                                       282   8e-77
GSVIVT01032119001 assembled CDS                                       282   1e-76
GSVIVT01025449001 assembled CDS                                       273   7e-74
GSVIVT01033302001 assembled CDS                                       262   1e-70
GSVIVT01023515001 assembled CDS                                       124   5e-29

>GSVIVT01023920001 assembled CDS
          Length = 229

 Score =  393 bits (1010), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/232 (82%), Positives = 204/232 (87%), Gaps = 3/232 (1%)

Query: 1   MERKLVKSRFKRVCVFCGSSSGKRECYRDAAIELAQELVEKRLDLVYGGGSIGLMGLVSQ 60
           ME K+V SRFK VCVFCGSS+GKR CYRDAA+EL QELV +RLDLVYGGGSIGLMGLVSQ
Sbjct: 1   MEEKVVYSRFKSVCVFCGSSTGKRNCYRDAAVELGQELVARRLDLVYGGGSIGLMGLVSQ 60

Query: 61  TVHEAGRNVLGIIPRTLMSKEITGETVGEVKPVADMHQRKAEMARHSDCFIALPGGYGTL 120
            VH  G +VLGIIPRTLM KEITGETVGEV+PVADMHQRKAEMARHSDCFIALPGGYGTL
Sbjct: 61  AVHRGGGHVLGIIPRTLMCKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTL 120

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIFVSAPNAKE 180
           EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQR+I VSAPNAKE
Sbjct: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNAKE 180

Query: 181 LVQKLEEYVPISEGIIAKARWEVHEXXXXXXXXXXXXAVGFNAATLQTEIAL 232
           LVQKLEEYVP+ +G+IAKARWEV +             VGFNA TLQTE+AL
Sbjct: 181 LVQKLEEYVPVHDGVIAKARWEVEQ---QQHQQQQQQQVGFNATTLQTEVAL 229


>GSVIVT01008688001 assembled CDS
          Length = 214

 Score =  375 bits (963), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 175/201 (87%), Positives = 190/201 (94%)

Query: 5   LVKSRFKRVCVFCGSSSGKRECYRDAAIELAQELVEKRLDLVYGGGSIGLMGLVSQTVHE 64
           +V+SRFKRVCVFCGSS+GKR CYRDAAIELAQELV +RLDLVYGGGS+GLMGLVSQ VH 
Sbjct: 1   MVRSRFKRVCVFCGSSTGKRNCYRDAAIELAQELVSRRLDLVYGGGSVGLMGLVSQEVHR 60

Query: 65  AGRNVLGIIPRTLMSKEITGETVGEVKPVADMHQRKAEMARHSDCFIALPGGYGTLEELL 124
            G +VLGIIP+TLM KEITGETVGEV+PVADMHQRKAEMARHSDCFIALPGGYGTLEELL
Sbjct: 61  GGGHVLGIIPKTLMCKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELL 120

Query: 125 EVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIFVSAPNAKELVQK 184
           EVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQR+I VSAPNA+ELVQK
Sbjct: 121 EVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNARELVQK 180

Query: 185 LEEYVPISEGIIAKARWEVHE 205
           LEEYVP+ +G++AKARWE  +
Sbjct: 181 LEEYVPVHDGVVAKARWEAEQ 201


>GSVIVT01025695001 assembled CDS
          Length = 218

 Score =  322 bits (824), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 148/205 (72%), Positives = 178/205 (86%)

Query: 1   MERKLVKSRFKRVCVFCGSSSGKRECYRDAAIELAQELVEKRLDLVYGGGSIGLMGLVSQ 60
           +E ++ +S+FKR+CVFCGSS GK+  Y+DAAI+L +ELV + +DLVYGGGSIGLMGLVSQ
Sbjct: 3   IEAEVEQSKFKRICVFCGSSQGKKTSYQDAAIQLGKELVSRNIDLVYGGGSIGLMGLVSQ 62

Query: 61  TVHEAGRNVLGIIPRTLMSKEITGETVGEVKPVADMHQRKAEMARHSDCFIALPGGYGTL 120
            VH  GR+V+G+IP+TLM +E+TG TVGEVK VADMHQRKAEMA+HSD FIALPGGYGTL
Sbjct: 63  AVHNGGRHVIGVIPKTLMPRELTGVTVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTL 122

Query: 121 EELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIFVSAPNAKE 180
           EELLEVI WAQLGIHDKPVGLLNVDGYYN LL+FIDKAV++GFI PS R+I VSAP A+E
Sbjct: 123 EELLEVIAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPSARHIIVSAPTAEE 182

Query: 181 LVQKLEEYVPISEGIIAKARWEVHE 205
           LV+KLEEYVP  +G+ +K  WE+ +
Sbjct: 183 LVKKLEEYVPSHQGVASKLSWEMEQ 207


>GSVIVT01025206001 assembled CDS
          Length = 212

 Score =  321 bits (822), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 148/199 (74%), Positives = 174/199 (87%)

Query: 7   KSRFKRVCVFCGSSSGKRECYRDAAIELAQELVEKRLDLVYGGGSIGLMGLVSQTVHEAG 66
           +S+FKR+CVFCGSS GK+  Y+DAAIEL +ELV + +DLVYGGGSIGLMGL+SQ V++ G
Sbjct: 3   QSKFKRICVFCGSSQGKKSSYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYDGG 62

Query: 67  RNVLGIIPRTLMSKEITGETVGEVKPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEV 126
           R+V+G+IP+TLM +EITGETVGEVK VADMHQRKAEMARHSD FIALPGGYGTLEELLEV
Sbjct: 63  RHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEV 122

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIFVSAPNAKELVQKLE 186
           ITWAQLGIHDKPVGLLNVDGYYN LL+FIDKAV++ FI PS R+I VSAP A+EL++KLE
Sbjct: 123 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEDFISPSARHIIVSAPTARELMKKLE 182

Query: 187 EYVPISEGIIAKARWEVHE 205
           EY P  EG+ +K  WE  +
Sbjct: 183 EYFPRHEGVASKLSWETEQ 201


>GSVIVT01033934001 assembled CDS
          Length = 216

 Score =  317 bits (811), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 146/196 (74%), Positives = 173/196 (88%)

Query: 7   KSRFKRVCVFCGSSSGKRECYRDAAIELAQELVEKRLDLVYGGGSIGLMGLVSQTVHEAG 66
           +SRFKR+CVFCGSSSGK+  Y++AA+EL +ELVE+R+DLVYGGGS+GLMGLVSQ VH+ G
Sbjct: 5   RSRFKRICVFCGSSSGKKASYQEAAVELGKELVERRIDLVYGGGSVGLMGLVSQAVHDGG 64

Query: 67  RNVLGIIPRTLMSKEITGETVGEVKPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEV 126
           R+VLG+IPRTLM +EITGETVGEV+ V+ MH+RKAEMAR +D FIALPGGYGTLEELLEV
Sbjct: 65  RHVLGVIPRTLMPREITGETVGEVRAVSHMHERKAEMARQADAFIALPGGYGTLEELLEV 124

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIFVSAPNAKELVQKLE 186
           ITWAQLGIH KPVGLLNVDGYYN LL+FIDKAVD+GF+ P+ R I VSAP AKELV++LE
Sbjct: 125 ITWAQLGIHKKPVGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKELVRELE 184

Query: 187 EYVPISEGIIAKARWE 202
           EYVP  + + +K  WE
Sbjct: 185 EYVPEHDEVTSKLIWE 200


>GSVIVT01009880001 assembled CDS
          Length = 216

 Score =  311 bits (796), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 147/201 (73%), Positives = 171/201 (85%)

Query: 5   LVKSRFKRVCVFCGSSSGKRECYRDAAIELAQELVEKRLDLVYGGGSIGLMGLVSQTVHE 64
           L+ SRFKRVCVFCGSS GK   Y+ AAI+LA +LVE+++DLVYGGGSIGLMGLVSQ V++
Sbjct: 4   LLPSRFKRVCVFCGSSPGKNPSYQLAAIQLANQLVERKIDLVYGGGSIGLMGLVSQAVYD 63

Query: 65  AGRNVLGIIPRTLMSKEITGETVGEVKPVADMHQRKAEMARHSDCFIALPGGYGTLEELL 124
            GR+VLG+IP+TLM +EITGETVGEV+ V+ MHQRKAEMAR +D FIALPGGYGTLEELL
Sbjct: 64  GGRHVLGVIPKTLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELL 123

Query: 125 EVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIFVSAPNAKELVQK 184
           EVITWAQLGIHDKPVGLLNVDGYYN LL+FIDKAVD+GFI  + R I VSAP A+EL+ K
Sbjct: 124 EVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFITAAARQIIVSAPTAQELLCK 183

Query: 185 LEEYVPISEGIIAKARWEVHE 205
           LEEYVP   G+  K  WE+ +
Sbjct: 184 LEEYVPKHSGVAPKLSWEMEQ 204


>GSVIVT01035377001 assembled CDS
          Length = 217

 Score =  282 bits (722), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 127/204 (62%), Positives = 166/204 (81%)

Query: 2   ERKLVKSRFKRVCVFCGSSSGKRECYRDAAIELAQELVEKRLDLVYGGGSIGLMGLVSQT 61
           E+   +S+FKRVCVFCGS+SG R+ + DAA+EL  ELV+++++LVYGGGS+GLMGL+SQT
Sbjct: 3   EKSNTRSKFKRVCVFCGSNSGNRKVFSDAALELGNELVKRKINLVYGGGSVGLMGLISQT 62

Query: 62  VHEAGRNVLGIIPRTLMSKEITGETVGEVKPVADMHQRKAEMARHSDCFIALPGGYGTLE 121
           V++   +VLG+IPR LM  EI+G+TVGEV+ V+DMH+RKAEMA+ +D FIALPGGYGT+E
Sbjct: 63  VYDGDCHVLGVIPRALMPLEISGQTVGEVRIVSDMHERKAEMAQEADAFIALPGGYGTME 122

Query: 122 ELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIFVSAPNAKEL 181
           ELLE+ITW+QLGIH KPVGLLNVDGYYN+LL   D  V +GFIKP  R+I VSAP AKEL
Sbjct: 123 ELLEMITWSQLGIHKKPVGLLNVDGYYNFLLALFDNGVKEGFIKPGARHIVVSAPTAKEL 182

Query: 182 VQKLEEYVPISEGIIAKARWEVHE 205
           + K+E+Y P  E + +   W++ +
Sbjct: 183 LVKMEQYTPAHEHVASHESWQMEQ 206


>GSVIVT01032119001 assembled CDS
          Length = 215

 Score =  282 bits (721), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 126/199 (63%), Positives = 163/199 (81%)

Query: 7   KSRFKRVCVFCGSSSGKRECYRDAAIELAQELVEKRLDLVYGGGSIGLMGLVSQTVHEAG 66
           K RFKR+CVFCGS  G +  + +AA++L   LVE+++DLVYGGGS+GLMGL+SQTV   G
Sbjct: 15  KQRFKRICVFCGSRPGYKSAFSEAALQLGNLLVERKIDLVYGGGSVGLMGLISQTVFNGG 74

Query: 67  RNVLGIIPRTLMSKEITGETVGEVKPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEV 126
            +VLG+IPR L+  EI+GET+GEVK VADMHQRK+EMA+++D FIALPGGYGT+EELLE+
Sbjct: 75  CHVLGVIPRALLPHEISGETIGEVKTVADMHQRKSEMAKNADAFIALPGGYGTMEELLEM 134

Query: 127 ITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIFVSAPNAKELVQKLE 186
           ITW+QLGIH+KPVGLLNVDGYYN LLT  DK V++GFI+ S RNI +SA  A+EL++K+E
Sbjct: 135 ITWSQLGIHEKPVGLLNVDGYYNSLLTLFDKGVEEGFIEDSARNIMISATTAEELIKKME 194

Query: 187 EYVPISEGIIAKARWEVHE 205
           EY P+ + +  +  WEV +
Sbjct: 195 EYAPVHDRVAPRQTWEVDQ 213


>GSVIVT01025449001 assembled CDS
          Length = 205

 Score =  273 bits (697), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 124/197 (62%), Positives = 159/197 (80%)

Query: 9   RFKRVCVFCGSSSGKRECYRDAAIELAQELVEKRLDLVYGGGSIGLMGLVSQTVHEAGRN 68
           +FKRVCV+CGS+SG R+ + DAA++L +E+VE+R+DL+YGGGS+GLMGLVSQ V++ G +
Sbjct: 3   KFKRVCVYCGSNSGNRKIFSDAALDLGREMVERRMDLIYGGGSVGLMGLVSQKVYDGGCH 62

Query: 69  VLGIIPRTLMSKEITGETVGEVKPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVIT 128
           VLG+IPR L+  EI+G  VG+V  V+DMH+RKAEMA  +D FIALPGGYGT+EELLEVI 
Sbjct: 63  VLGVIPRALVPIEISGHAVGQVVIVSDMHERKAEMASRADAFIALPGGYGTMEELLEVIA 122

Query: 129 WAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIFVSAPNAKELVQKLEEY 188
           WAQLGIHDKPVGLLNVDGYY+ LL   DK V++GFIKPS R+I VSA  A+EL+QK+E+Y
Sbjct: 123 WAQLGIHDKPVGLLNVDGYYDCLLGLFDKGVEEGFIKPSARSIVVSAKTARELIQKMEDY 182

Query: 189 VPISEGIIAKARWEVHE 205
           +P  + +     W   E
Sbjct: 183 IPFHDQVAPTQSWNAGE 199


>GSVIVT01033302001 assembled CDS
          Length = 222

 Score =  262 bits (669), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 115/193 (59%), Positives = 156/193 (80%)

Query: 10  FKRVCVFCGSSSGKRECYRDAAIELAQELVEKRLDLVYGGGSIGLMGLVSQTVHEAGRNV 69
           FKR+CVFCGS  G +  + DA + L ++LVE+ +DLVYGGGS GLMGL+S+TV + GR+V
Sbjct: 16  FKRICVFCGSKPGSKSIFSDATVALGKQLVERNIDLVYGGGSKGLMGLISKTVLDGGRHV 75

Query: 70  LGIIPRTLMSKEITGETVGEVKPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITW 129
           LGIIP+ LM  EITG+T+G++K V+ MH+RK+EMA+ +D FIALPGGYGT+EELLE++TW
Sbjct: 76  LGIIPKALMPYEITGKTIGDIKIVSSMHERKSEMAKRADAFIALPGGYGTMEELLEMVTW 135

Query: 130 AQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRNIFVSAPNAKELVQKLEEYV 189
           +QLGIH KPVGLLNVDGY+N L+   DK V++GFI  S+R+I VSA  A+EL++K+EEY 
Sbjct: 136 SQLGIHGKPVGLLNVDGYFNSLIELFDKGVEEGFIVDSERHIIVSADTAEELMKKMEEYA 195

Query: 190 PISEGIIAKARWE 202
           P+ + + ++  WE
Sbjct: 196 PVHDAVTSRRSWE 208


>GSVIVT01023515001 assembled CDS
          Length = 80

 Score =  124 bits (310), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 63/103 (61%), Positives = 70/103 (67%), Gaps = 24/103 (23%)

Query: 103 MARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDG 162
           M RHSDC IALP                        +G LNVDGYYNYLLTFIDKAVDDG
Sbjct: 1   MTRHSDCLIALP------------------------IGFLNVDGYYNYLLTFIDKAVDDG 36

Query: 163 FIKPSQRNIFVSAPNAKELVQKLEEYVPISEGIIAKARWEVHE 205
           FIKPSQR+I VSAPNAK+LVQKLEEYV + + +IAKAR EV +
Sbjct: 37  FIKPSQRHIIVSAPNAKKLVQKLEEYVLVHDRVIAKARQEVEQ 79