Jatropha Genome Database
- JcCB0259591.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0259591.30 - phase: 0 /partial
(94 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01037436001 assembled CDS 100 2e-22
GSVIVT01019553001 assembled CDS 72 4e-14
GSVIVT01000246001 assembled CDS 62 4e-11
GSVIVT01036522001 assembled CDS 60 3e-10
GSVIVT01037131001 assembled CDS 57 2e-09
GSVIVT01025914001 assembled CDS 53 3e-08
GSVIVT01018115001 assembled CDS 53 3e-08
GSVIVT01016685001 assembled CDS 53 3e-08
GSVIVT01037673001 assembled CDS 52 4e-08
GSVIVT01015012001 assembled CDS 52 5e-08
GSVIVT01021307001 assembled CDS 50 2e-07
GSVIVT01034983001 assembled CDS 50 3e-07
GSVIVT01009959001 assembled CDS 47 1e-06
GSVIVT01030528001 assembled CDS 47 1e-06
GSVIVT01031419001 assembled CDS 46 3e-06
GSVIVT01021309001 assembled CDS 46 4e-06
GSVIVT01007995001 assembled CDS 46 4e-06
GSVIVT01009957001 assembled CDS 46 4e-06
GSVIVT01025913001 assembled CDS 46 4e-06
GSVIVT01005081001 assembled CDS 46 5e-06
>GSVIVT01037436001 assembled CDS
Length = 854
Score = 99.8 bits (247), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGYTL 73
GFE+ K ACCGLG +G GC+ ++C+ S +VWWDLYNP+ AVNS LAD+AW G +
Sbjct: 768 GFEEVKMACCGLGPYGGMAGCVDPGLACHDASTHVWWDLYNPTPAVNSLLADSAWFGQPM 827
Query: 74 SGICHPMTVQDLVHAPV 90
IC P+TV++L AP+
Sbjct: 828 PNICRPVTVKELATAPI 844
>GSVIVT01019553001 assembled CDS
Length = 473
Score = 72.4 bits (176), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGYTL 73
GF +ACCGLG + I CLS EM+C+ S ++WWD ++P+ VN+ LAD WS
Sbjct: 397 GFNFTADACCGLGRYRGWIMCLSPEMACSNASNHIWWDQFHPTDVVNAILADNVWSSLH- 455
Query: 74 SGICHPMTVQDLVHA 88
+G+C+P +QD++ A
Sbjct: 456 TGMCYPSNLQDMLVA 470
>GSVIVT01000246001 assembled CDS
Length = 370
Score = 62.4 bits (150), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGYTL 73
GF ACCG+G++ I CL + C YV+WD ++P++AVN LA A++G
Sbjct: 293 GFSVTNRACCGMGMNQAQITCLPFSVPCVDRDQYVFWDAFHPTQAVNKILAHKAYAGSRS 352
Query: 74 SGICHPMTVQDLV 86
C+P+ +Q ++
Sbjct: 353 E--CYPINIQQMI 363
>GSVIVT01036522001 assembled CDS
Length = 332
Score = 59.7 bits (143), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGYTL 73
GF +ACCG G +G + CL +E C Y++WD ++P++AVN+ +A+ S YT
Sbjct: 260 GFTVPNSACCGNGRYGGDLTCLPLEQPCKNRDQYIFWDSFHPTQAVNAMIAE---SCYTE 316
Query: 74 SGI-CHPMTVQDL 85
SG C+P+++ L
Sbjct: 317 SGTECYPISIYQL 329
>GSVIVT01037131001 assembled CDS
Length = 363
Score = 56.6 bits (135), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGYTL 73
GF CCGLG + I CL ++M C + YV+WD ++P+ A N LA A+ Y
Sbjct: 291 GFSVVDRGCCGLGRNQGQITCLPMQMPCLNRNEYVFWDAFHPTTAANVILAQTAF--YGP 348
Query: 74 SGICHPMTVQDL 85
C+P+ VQ +
Sbjct: 349 PSDCYPINVQQM 360
>GSVIVT01025914001 assembled CDS
Length = 336
Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGYTL 73
GF CCG+G + I CL + C+ YV+WD ++P++AVN + A++G
Sbjct: 255 GFSVINRGCCGIGRNSGQITCLPFQTPCSNREQYVFWDAFHPTEAVNIIMGRKAFNGD-- 312
Query: 74 SGICHPMTVQDLVH 87
+PM ++ L +
Sbjct: 313 KSAVYPMNIEQLAN 326
>GSVIVT01018115001 assembled CDS
Length = 728
Score = 52.8 bits (125), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGYTL 73
GF+D++N CC + V C+ + CN +V+WD +PS A N +A+ ++G +L
Sbjct: 656 GFKDSRNPCCIVS--EVNGACIPDKTPCNDRDGHVFWDAVHPSSAANRIIANEIFNGTSL 713
Query: 74 SGICHPMTVQDLVHA 88
S PM V+ L++A
Sbjct: 714 ST---PMNVRKLINA 725
>GSVIVT01016685001 assembled CDS
Length = 392
Score = 52.8 bits (125), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMS-----CNQPSAYVWWDLYNPSKAVNSFLADAAW 68
GF++ K ACCG G C + C PS YV+WD ++ ++ + LAD W
Sbjct: 311 GFKEGKTACCGTGQFRGVFSCGGRRIVKEFQLCENPSEYVFWDSFHLTEKLYKQLADEMW 370
Query: 69 SGYTLSGICHPMTVQDL 85
SG S + P ++++L
Sbjct: 371 SGSPYSDVVRPYSLKNL 387
>GSVIVT01037673001 assembled CDS
Length = 364
Score = 52.4 bits (124), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSG--- 70
GF++ K ACCGLG CL + C+ +V+WDLY+P++A S + ++G
Sbjct: 292 GFKEVKAACCGLGNLNADFPCLPISTYCSNRKDHVFWDLYHPTEAAASIVVQNIFNGTQE 351
Query: 71 YTLSGICHPMTVQDLVHA 88
YT PM ++ LV A
Sbjct: 352 YTF-----PMNLRQLVAA 364
>GSVIVT01015012001 assembled CDS
Length = 391
Score = 52.4 bits (124), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 15 FEDAKNACCGLGLHGVAIGCLSVEMS-----CNQPSAYVWWDLYNPSKAVNSFLADAAWS 69
F+D NACCG G +G C + C P Y+WWD ++P++ ++ A A W
Sbjct: 294 FKDGVNACCGAGPYGGVFSCGGTKKVTEYQLCENPHEYIWWDSFHPTERIHEQFAKALWD 353
Query: 70 GYTLSGICHPMTVQDL 85
G S P +Q+L
Sbjct: 354 GPPFS--VGPYNLQEL 367
>GSVIVT01021307001 assembled CDS
Length = 394
Score = 50.1 bits (118), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGYTL 73
GF + CCG L GC+ C S YV+WD +PS+A N A A+S T
Sbjct: 325 GFRVTDDVCCGTSL----TGCIPFTTPCENRSEYVYWDFAHPSEATNVIFAGRAYSAQTP 380
Query: 74 SGICHPMTVQDLVH 87
S HP+ + L
Sbjct: 381 SD-AHPIDIHTLAQ 393
>GSVIVT01034983001 assembled CDS
Length = 302
Score = 49.7 bits (117), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 7 QNLQLFAGFEDAKNACCGL-GLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLAD 65
QN + F GFE+A ++CC + G G I C C+ S YV+WD Y+PS A N +A
Sbjct: 223 QNYESF-GFENANSSCCYIAGRFGGLIPCGPPSKVCSDRSKYVFWDPYHPSDAANEIMAT 281
Query: 66 AAWSGYTLSGICHPMTVQDLVHA 88
G S PM ++ L+ +
Sbjct: 282 RLLGGD--SDDIWPMNIRQLIQS 302
>GSVIVT01009959001 assembled CDS
Length = 358
Score = 47.4 bits (111), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 13 AGFEDAKNACCGLGLHGVAIGCLSVE-MSCNQPSAYVWWDLYNPSKAVNSFL 63
+GFE A CCG GL VA+ C + +CN + YV+WD Y+P++ V L
Sbjct: 294 SGFEVANKGCCGTGLIEVALLCNRLNPFTCNDVTKYVFWDSYHPTERVYKIL 345
>GSVIVT01030528001 assembled CDS
Length = 658
Score = 47.4 bits (111), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVE-MSCNQPSAYVWWDLYNPSKAVNSFLA 64
GFE+A ACC G+ + C + +CN YV+WD ++P++ NS +A
Sbjct: 595 GFENAAVACCSTGMFEMGYACSRLNPFTCNDADKYVFWDAFHPTQKTNSIIA 646
>GSVIVT01031419001 assembled CDS
Length = 1026
Score = 46.2 bits (108), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEM-SCNQPSAYVWWDLYNPSKAVNSFLAD 65
GF +++ ACCG GL +I C + + +C + YV+WD ++P++A N LAD
Sbjct: 963 GFFESRKACCGTGLLETSILCNAESVGTCANATEYVFWDGFHPTEAANKILAD 1015
>GSVIVT01021309001 assembled CDS
Length = 365
Score = 45.8 bits (107), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGYTL 73
GF CCG+G + I CL + C + Y++WD ++P +A N + ++S +
Sbjct: 292 GFRVTNAGCCGVGRNNGQITCLPFQTPCQNRNEYLFWDAFHPGEAANVVIGRRSYSAQS- 350
Query: 74 SGICHPMTVQDLVH 87
S +P+ ++ L
Sbjct: 351 SSDAYPIDIRSLAQ 364
>GSVIVT01007995001 assembled CDS
Length = 385
Score = 45.8 bits (107), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLA 64
GF ++ + CC G A+ C+ + C S YV+WD Y+PS + N +A
Sbjct: 287 GFNNSDSPCCSFGKIRPALTCVPASILCEDRSKYVFWDEYHPSDSANELIA 337
>GSVIVT01009957001 assembled CDS
Length = 356
Score = 45.8 bits (107), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 13 AGFEDAKNACCGLGLHGVAIGCLSVE-MSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGY 71
+GFE CCG GL V++ C + +CN + YV+WD Y+P++ + + GY
Sbjct: 292 SGFEVVNKGCCGTGLIEVSVLCDQLNPFTCNDATKYVFWDSYHPTERAYKTIIGEIFQGY 351
Query: 72 TLS 74
S
Sbjct: 352 VDS 354
>GSVIVT01025913001 assembled CDS
Length = 368
Score = 45.8 bits (107), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 14 GFEDAKNACCGLGLHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGYTL 73
GFE CCG+G + I CL ++ C+ Y++WD ++P+ N +A +
Sbjct: 295 GFEVVDKGCCGVGKNNGQITCLPLQEPCDDRRKYIFWDAFHPTDVANIIMAKKS-FSSKS 353
Query: 74 SGICHPMTVQDL 85
+P+ +Q L
Sbjct: 354 QSYAYPINIQQL 365
>GSVIVT01005081001 assembled CDS
Length = 368
Score = 45.8 bits (107), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 14 GFEDAKNACCGLG--LHGVAIGCLSVEMSCNQPSAYVWWDLYNPSKAVNSFLADAAWSGY 71
GF A ACCG G G+ I C C+ S YV+WD Y+PS+A N +A G
Sbjct: 295 GFVSASKACCGNGGQFQGI-IPCGPTSSMCSDRSKYVFWDPYHPSEAANLIIAKRLLDGG 353
Query: 72 TLSGICHPMTVQDL 85
T PM ++ L
Sbjct: 354 T--KYISPMNLRQL 365