Jatropha Genome Database
- JcCB0246971.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0246971.10 + phase: 0
(367 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01026027001 assembled CDS 116 1e-26
GSVIVT01031692001 assembled CDS 111 4e-25
GSVIVT01013538001 assembled CDS 107 8e-24
GSVIVT01013506001 assembled CDS 99 3e-21
GSVIVT01030585001 assembled CDS 96 4e-20
GSVIVT01026026001 assembled CDS 88 5e-18
GSVIVT01031694001 assembled CDS 67 1e-11
GSVIVT01010911001 assembled CDS 65 5e-11
GSVIVT01000395001 assembled CDS 56 2e-08
GSVIVT01026445001 assembled CDS 49 4e-06
>GSVIVT01026027001 assembled CDS
Length = 372
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 162/379 (42%), Gaps = 70/379 (18%)
Query: 5 IPEEIVADILLKSKVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFICGSNFYD 64
IP+EI+ +IL VKSL+RFKC+SKS +IS DF K L + D
Sbjct: 26 IPDEIILEILCLLPVKSLMRFKCVSKSWREMISDPDFEKKQLAVAARD------------ 73
Query: 65 VNNSGEAVPVESPLEQQLPFLNGENCTILCSSDGLVLLRISIDKLNHRKTKAKVRADAYS 124
SGE S L P + ++C + C + +NH + +
Sbjct: 74 ---SGEV--YNSRLIMHYPSMKLKSCPLSC-----LFYEPVGHSVNHEYPENDI------ 117
Query: 125 LVLWNPSTRQREVLPNPKTFAPYNTFISYGLGYDSATNCYKVVQCG--------YYRILV 176
+ +WNPSTR+ LP P +F ++YG GYDS + YKV + G Y++ V
Sbjct: 118 IFVWNPSTREFRRLP-PISFMQCFHLVAYGFGYDSIADDYKVTRVGCYCIGRYYEYQVRV 176
Query: 177 FSLESYSWRKPKDFGFDITFSQAGTLTHGA--FHWVAELENSSKIVVAFNLSDEKIVQLQ 234
FSL WRK ++F + + G +G+ F V + EN VV +L+ E +
Sbjct: 177 FSLRGNVWRKIENFPCYLFTDEPGIHVNGSINFGGVGDSENYYWSVVGLDLASESYRMVP 236
Query: 235 LPXXXXXXXXXXXXXXELSVLQGNLCLLESINNICNGGDSPGAYLNIWVMKEYGVTASWN 294
LP + L G C + + +++WVM++YGV SWN
Sbjct: 237 LPDCADPNVKPM-----IMALGGRFCTIFDNDEA----------VDVWVMEQYGVKKSWN 281
Query: 295 KLITIA----QERVYSVSAHFCFKNDAVFIVNKSLWDISALLRYDLKNKELKTL----KT 346
KL+T+ V F ++ A+ + + + L D + T+
Sbjct: 282 KLVTVPYFPDPMTVDCTKPVFFLRDGAILM---EFYGLLVLYNIDRDESTIPTIYGTRHC 338
Query: 347 FEIEVPEMVSYVESLVSPN 365
E+EV Y+E++VSPN
Sbjct: 339 HEVEV-----YLETIVSPN 352
>GSVIVT01031692001 assembled CDS
Length = 357
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 171/397 (43%), Gaps = 82/397 (20%)
Query: 5 IPEEIVADILLKSKVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFIC------ 58
+P I+ +ILL+ VKSL+R +C+ K+ +LIS F+KSHL Q C
Sbjct: 4 LPLHIIENILLRLPVKSLIRSRCVCKAWRTLISHPHFVKSHLRLPQTQARTQFCTLNYGE 63
Query: 59 -GSNFYDV------------NNSGEAVPVESPLEQQLPFLNG--ENCTILCSSDGLVLLR 103
G N+Y V +++G A+ + + + G +L S DGL+ L
Sbjct: 64 PGDNYYLVVGASTKDCEAFSDDNGGALAFDYLFD-----IGGFKYEVVLLDSCDGLLCL- 117
Query: 104 ISIDKLNHRKTKAKVRADAYSLVLWNPSTRQ-REVLPNPKTFAPYNTFISYGLGYDSATN 162
+D N +VLWNPSTRQ ++ PNP + +G GYDS +
Sbjct: 118 --VDLAN-------------KIVLWNPSTRQCNQLPPNPNVL---DFLGCHGFGYDSFAD 159
Query: 163 CYKVVQCGYYR------ILVFSLESYSWRKPKDFGFDITFSQAGTLTHGAFHWVA-ELEN 215
YKV + VFSL+S W++ ++ T+ HGA HWVA +
Sbjct: 160 DYKVFLVSMLNPNFETVVDVFSLKSNKWKRIQEKHHTRAARMCATVLHGALHWVAYDPIL 219
Query: 216 SSKIVVAFNLSDEKIVQLQLPXXXXXXXXXXXXXXELSVLQGNLCLLESINNICNGGDSP 275
++AF+ E+ ++ +P +L V+ G LC+ +G P
Sbjct: 220 GFDTIMAFDFEKERFREMAIP------REEEELYVKLRVVGGCLCV--------HGSKDP 265
Query: 276 GAYLNIWVMKEYGVTASWNKLITIAQERVYSVSAHF------CFKNDAVFIVNKSLWDIS 329
+WVMKEYGV SW+K+ + +++ F N+ + +VNK
Sbjct: 266 S---KMWVMKEYGVDTSWSKMASPYNSLRNNLNEEFRCELLHTLNNEHMLLVNK-----E 317
Query: 330 ALLRYDLKNKELKTLKTFEIEVPEMVS-YVESLVSPN 365
L+ D K K + + + YVE+LVSP+
Sbjct: 318 KLMLCDQKENTYKNIMPYGRWFRHDANLYVETLVSPH 354
>GSVIVT01013538001 assembled CDS
Length = 711
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 144/309 (46%), Gaps = 48/309 (15%)
Query: 5 IPEEIVADILLKSKVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFICGSNFYD 64
IPE I+ DIL + VKSLLRF+C+ K+ +LIS F+++HL + + + D
Sbjct: 4 IPEVIMVDILSRLPVKSLLRFRCVCKAWCTLISHPQFVETHLRQQHKRPVIGLVVPHSVD 63
Query: 65 VNNSGEAVPVESPLEQQLPFLNGENCTILCSSDGLVLLRISIDKLNHRKTKAKVRADAYS 124
+ + V+ LE L N T+L S +GL+ + K K
Sbjct: 64 DPLHKDDLAVD--LELHLGIPNKRTTTVLDSCNGLLCVVDCYYGFYSLKPPQK------- 114
Query: 125 LVLWNPSTRQREVLPNPKTFAPYNTFISYGLGYDSATNCYKVVQCGYY------RILVFS 178
L+LWNPSTRQ +P P +F Y + Y YD ++ YK+V+ + I +F+
Sbjct: 115 LILWNPSTRQCNHIPCP-SFVGYQNCM-YSFFYDPGSDDYKIVRIFTFLGKDKTGIDIFT 172
Query: 179 LESYSWRKPKDFGFDITFSQAGTLTHGAFHWVA-------ELENSSKIVVAFNLSDEKIV 231
L++ WR+ ++ + + T +G HW+A E E SS +VAF+L +EK
Sbjct: 173 LKTNKWRRVEETHSSVIGYWSATYFNGNLHWLAFRYGGYGEDERSS--MVAFSLREEKFQ 230
Query: 232 QLQLPXXXXXXXXXXXXXXELSVLQGNLCLLESINNICNGGDSPGAYLN-IWVMKEYGVT 290
+++LP L VL G LC+ G Y N WVM+EYG+
Sbjct: 231 EMELPSQRAVFG--------LRVLGGCLCV-------------DGLYTNDKWVMEEYGIK 269
Query: 291 ASWNKLITI 299
SW LI I
Sbjct: 270 ESWKSLIAI 278
>GSVIVT01013506001 assembled CDS
Length = 423
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 170/387 (43%), Gaps = 67/387 (17%)
Query: 8 EIVADILLKSKVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGD-----LSKFICGS-- 60
E + DI L+ VKS++RF+C+ KS +L DFI HL ++ + L K + S
Sbjct: 23 ENLIDIHLRLPVKSIVRFRCVCKSWCTLFDDPDFISMHLRQASANSNGRLLFKHLSSSEQ 82
Query: 61 NFYDVNNS---GEAVPVESPLEQQLPFLNGENCTILCSSDGLVLLRISIDKLNHRKTKAK 117
Y + ++ E +E P+ + + I+ SS+GL+ L T++
Sbjct: 83 EIYSLRSNIAFAEVRRLEVPVPSKTDYYQ-----IVGSSNGLICL-----------TESN 126
Query: 118 VRADAYS--LVLWNPSTRQREVLP--NPKTFAPYNTFISYGLGYDSATNCYKVVQCGYY- 172
+ S L LWNP+ R+ + LP + F + G + N YKVV+ Y+
Sbjct: 127 FKGSYLSLNLFLWNPAIREFQTLPKYHINNFTSPLMVVGLGFAFHPVINDYKVVRIVYFM 186
Query: 173 -----RILVFSLESYSWRK-PKDFGFDITFSQAGTLTHGAFHWVA----ELENSSKIVVA 222
V+SL + SWRK + I + + T +GA HW+A E++N+ ++++
Sbjct: 187 RNKTSEADVYSLRTGSWRKVDANICCYIHSNVSRTFINGALHWLAGKKNEMDNTDNLILS 246
Query: 223 FNLSDEKIVQLQLPXXXXXXXXXXXXXXELSVLQGNLCLL----ESINNICNGGDSPGAY 278
F+++ + ++ LP L+ +G+L +L N C
Sbjct: 247 FDMAKDVFKEIMLPDFGYDELIRKC----LADYKGSLSVLFYDAYHSNENC--------- 293
Query: 279 LNIWVMKEYGVTASWNKLITIAQERVYSVSAHFCFKNDAVFIVNKSLWDISALLRYDLKN 338
++WVM+EYGV SW K TI E + F +A+ KS IS N
Sbjct: 294 -DVWVMEEYGVAKSWTKHFTIRHEIEIIIPFEFFDNGEAILQKKKSGGFISW-------N 345
Query: 339 KELKTLKTFEIEVP-EMVSYVESLVSP 364
+ + + P +V Y+ESLVSP
Sbjct: 346 PDGIRFRDLGVSGPARLVEYMESLVSP 372
>GSVIVT01030585001 assembled CDS
Length = 423
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 173/394 (43%), Gaps = 72/394 (18%)
Query: 5 IPEEIVADILLKSKVKSLLRFKCISKSCNSLISSQDFIKSHLHR---------------- 48
I E + D+LL+ VKS++RFKC+ +S +L + DFI +L R
Sbjct: 21 ILSENLVDVLLRLPVKSIIRFKCVCQSWQTLFNDPDFINMNLRRAITHNNCCMLLKYLSS 80
Query: 49 SQGDLSKFICGSNFYDVNNSGEAVPVESPLEQQLPFLNGENCTILCSSDGLVLLRISIDK 108
S+ ++ C +F + VP ++ I+ SS+GL+ L S +K
Sbjct: 81 SEEEVYSLRCDKDFAEFRRLQVPVPSKTDYYH-----------IVGSSNGLICLTESNNK 129
Query: 109 LNHRKTKAKVRADAYSLVLWNPS-TRQREVLP----NPKTFAPYNTFISYGLGYDSATNC 163
++ V D + LWNPS T Q + LP N +P+ + G + +
Sbjct: 130 GSY------VTVDTF---LWNPSVTAQWKPLPKYLINNMMTSPF-MVVGLGFAFHPQIDD 179
Query: 164 YKVVQCGY------YRILVFSLESYSWRK-PKDFGFDITFSQAGTLTHGAFHWVAELEN- 215
YKVV+ Y Y + V+SL+ +W+ I + + T +GA HW+A +N
Sbjct: 180 YKVVRIVYFLKSKTYEVHVYSLKQDAWKNIDAKVHCHIHDTVSRTFVNGALHWLAAKKNQ 239
Query: 216 ----SSKIVVAFNLSDEKIVQLQLPXXXXXXXXXXXXXXELSVLQGNLCLLESINNICNG 271
S ++++F++ ++ + ++ LP L+ +G L +L + CN
Sbjct: 240 GRGKSDDLILSFDMVEDNLREMILPEFGYDESSTQKC---LADYKGLLSVLVYNAHRCND 296
Query: 272 GDSPGAYLNIWVMKEYGVTASWNKLITIAQERVYSVSAHFCFKNDAVFIVNKSLWDISAL 331
+IWVM EYGV +SW K T + + F N V + NK+ L
Sbjct: 297 N------CDIWVMDEYGVASSWTKRFTFCLDVEILILLDF-LDNGEVVVQNKN----GGL 345
Query: 332 LRYDLKNKELKTLKTFEIEVPE-MVSYVESLVSP 364
+ D +++ LK + P +V Y+E+LVSP
Sbjct: 346 VACDPNGGKIRDLK---VAGPACLVKYIETLVSP 376
>GSVIVT01026026001 assembled CDS
Length = 243
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 38/258 (14%)
Query: 124 SLVLWNPSTRQREVLPNPKTFAPYNTFISYGLGYDSATNCYKVVQ---CGY-----YRIL 175
++ +WNPS ++ + LP+ K F +SY GYDS T+ YKVV+ C Y +
Sbjct: 5 TIFVWNPSIKESKRLPS-KPFEQLFYLVSYAFGYDSITDDYKVVRLVCCSINDSYEYHVE 63
Query: 176 VFSLESYSWRKPKDFGFDITFSQAGTLTHGAFHWVAELE--NSSKIVVAFNLSDEKIVQL 233
VFSL S +WRK + F + + +AG +G+ +W + N + + +L+ E +
Sbjct: 64 VFSLRSNAWRKIRSFPYFLFTDEAGKHVNGSINWAVSRDKNNDHWFIASLDLATESYEVV 123
Query: 234 QLPXXXXXXXXXXXXXXELSVLQGNLCLLESINNICNGGDSPGAYLNIWVMKEYGVTASW 293
P + VL G C++ ++I +++WVM+EYGV SW
Sbjct: 124 PQPDCANETLKPI-----IRVLGGQFCIIFEYDDI----------IDVWVMQEYGVKESW 168
Query: 294 NKLITI-----AQERVYSVSAHFCFKNDAVFIVNKSLWDISALLRYDLKNKELKTLKTFE 348
+KL+T+ + Y+ F K A+ I + L+ Y+ E + +
Sbjct: 169 SKLVTVPFFSDPLDANYA-KPLFYLKEGAILIDFYGM-----LILYNFNRNESTSPMIYG 222
Query: 349 I-EVPEMVSYVESLVSPN 365
+ E+ Y+ES+VSPN
Sbjct: 223 VHHYHEVEVYLESMVSPN 240
>GSVIVT01031694001 assembled CDS
Length = 184
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 5 IPEEIVADILLKSKVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFICGSNFYD 64
+P I+ +ILL+ VKSL+RF+C+ K+ +LIS F++SH Q +C ++ +
Sbjct: 4 LPLHIIENILLRLPVKSLIRFRCVCKAWRTLISHPHFVRSHFRLPQTQARTRLCIIDYSE 63
Query: 65 VNNSGEAVPVESPLEQQLPFLNGENCTILCSSDGLVL---LRISIDKLNHRKTKAK---- 117
++ V S ++C +DG L I K H
Sbjct: 64 RGDNHSMVVRAS----------TKDCEAFSDNDGGSLAFDYLFDIGKFKHEVVLLDSCDG 113
Query: 118 ---VRADAYSLVLWNPSTRQ-REVLPNPKTFAPYNTFIS-YGLGYDSATNCYKV 166
+ A +VLWNPSTRQ ++ PNP F+ +G GYDS+ + YK+
Sbjct: 114 LLCIADLANKIVLWNPSTRQFNQLPPNPNVV----DFVGCHGFGYDSSADDYKI 163
>GSVIVT01010911001 assembled CDS
Length = 415
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 8 EIVADILLKSKVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFICG---SNFYD 64
+++ +I L++ VK LLRF+ +SK SLIS F H RS + + G SNF D
Sbjct: 37 DLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVLLGLPNSNF-D 95
Query: 65 VNNSGEAVPVESPLEQQLPFLNGE-NCTILCSSDGLVLLRISIDKLNHRKTKAKVRADAY 123
+ E E PL + L F+ +L +GL+ + + +
Sbjct: 96 FISFDEKKASEPPL-RSLDFIGDPLGVKVLQVCNGLLCC-----------STVRSLGTSR 143
Query: 124 SLVLWNPSTRQREVLPNPKTFAPYNTFISYGLGYDSATNCYKVVQC--------GYYRIL 175
+ + N +TR+ VLP P + +T L +D + + Y V C +Y+I
Sbjct: 144 NYYICNLATRRFSVLPPPCSSGGRDTVFGINLAFDPSKSPYYSVICVRSCEVSISHYQIE 203
Query: 176 VFSLESYSWR---KPKDFGFDITFSQAGTLTHGAFHWVA 211
++S + WR KP FD+ F G +GA HW++
Sbjct: 204 IYSSGTGDWRLSGKPFRAPFDMVFYD-GVFWNGAVHWIS 241
>GSVIVT01000395001 assembled CDS
Length = 260
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 23/154 (14%)
Query: 7 EEIVADILLKSKVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFICGSNFYDVN 66
E+I +IL + VKSLL K +SK LI S DF+ S L S+ + S + +
Sbjct: 20 EDITTNILSRLPVKSLLMCKSVSKRWRRLICSPDFVLSQLRWSREN------PSLIFFLR 73
Query: 67 NSGEAVPVESPLEQQLPFLNGE---NCTILCSSDGLVLLRISIDKLNHRKTKAKVRADAY 123
E + + + +++P G+ NC ++CS +G + L I + NH
Sbjct: 74 YENELIKISGEVFERIPLPFGQRPNNCDMICSFNGFICLTNYIGR-NH------------ 120
Query: 124 SLVLWNPSTRQREVLPNPK-TFAPYNTFISYGLG 156
++++WNP+T++ ++LP + P ++YG G
Sbjct: 121 NILIWNPATQEVQLLPTTTLSKKPPKIGVAYGPG 154
>GSVIVT01026445001 assembled CDS
Length = 378
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 61/254 (24%)
Query: 7 EEIVADILLKSKVKSLLRFKCISKSCNSLISSQDFIKSHLHRSQGDLSKFI------CGS 60
++I D+L + K+LL KC+ K +IS + FI+ L R + F C
Sbjct: 4 DDICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQDLLQRPEPLAGFFFQERYQWCDE 63
Query: 61 NFYDVN---NSGEAVPVESPLEQQLPFLNGENCTILCSSDGLVLLRISIDKLNHRKTKAK 117
+ ++ + E V+ + LP E+ IL S +GLV R +
Sbjct: 64 DISTISYIPATMEGTQVQQTIFSFLP----EDVVILGSCNGLVCCR------------SV 107
Query: 118 VRADAYSLVLWNPSTRQ----REVLPNPKTFAPYNTFISYGLGY-------DSATNCYKV 166
+ S+ + NPS +Q E P+ ++ SYGL + D TN +KV
Sbjct: 108 FPSPDPSIFVCNPSNKQWIRLLETTPDKES--------SYGLAFNPFQSPIDMPTN-FKV 158
Query: 167 VQC----------GYYRILVFSLESYSWRKPKDFGF--DITFSQAGTLTHGAFHWVAELE 214
V+ Y+ ++S ++ +W+K K+ F G G HW+ + +
Sbjct: 159 VRVSQAQTDMDDDSYFSFEIYSSQAGAWKKSKEICQCNHNLFKNKGIFVGGILHWLTDGD 218
Query: 215 NSSKIVVAFNLSDE 228
V++FN+ +E
Sbjct: 219 Q----VLSFNIENE 228