Jatropha Genome Database
- JcCB0237301.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0237301.10 + phase: 2 /pseudo/partial
(507 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01021727001 assembled CDS 375 e-104
GSVIVT01036782001 assembled CDS 340 1e-93
GSVIVT01028342001 assembled CDS 291 6e-79
GSVIVT01022428001 assembled CDS 269 3e-72
GSVIVT01030264001 assembled CDS 226 3e-59
GSVIVT01026078001 assembled CDS 210 1e-54
GSVIVT01026077001 assembled CDS 180 1e-45
GSVIVT01020878001 assembled CDS 171 6e-43
GSVIVT01023815001 assembled CDS 52 5e-07
GSVIVT01018887001 assembled CDS 50 2e-06
>GSVIVT01021727001 assembled CDS
Length = 452
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/435 (49%), Positives = 270/435 (62%), Gaps = 65/435 (14%)
Query: 79 ESDFLSDLKEHEKKALLDLRSKNXRSDSSEXDFLXXXXXXXXXXTGEDKDQKEKLKGKSN 138
ES+FLSDLK++E KAL++LRSK + F +KE+LK ++
Sbjct: 35 ESNFLSDLKDNENKALIELRSKLEEAILRNTLF-----------------KKEELKKET- 76
Query: 139 KXXXXXXXXXXXXXXXXXXXXXXKQANGDIIDENNVEKAEPDQKVDRDIAIWGVPLLPSK 198
K D + VEK P++ VDRDI +WGVPLLPSK
Sbjct: 77 ---------------ATPEEAEPKTEGEDKQSSSEVEK--PEEVVDRDITLWGVPLLPSK 119
Query: 199 GDDRTDVLLLKFLRAREFKANDAFEMLKNSLQWRKENKIDSILEEDLEADLGSMAYIAGN 258
+ DV+LLKFLRAREFK N+AFEMLK +L+WRKE K DSILEE+L D+ S+AY+ G
Sbjct: 120 CAEGNDVILLKFLRAREFKVNEAFEMLKKTLEWRKEFKTDSILEEELGQDISSVAYMNGV 179
Query: 259 DRDGHPICYNIFAVLGNDDLYGKAF--EEKRGKFMRSRIQLMEKTIQKLDFNPGGVSATL 316
DR+GHPICYNI+ VL N +LY K F EEKR +F+R RIQLMEK IQKLDF PGGV++ L
Sbjct: 180 DREGHPICYNIYGVLENQELYQKTFGTEEKRNQFLRWRIQLMEKGIQKLDFKPGGVTSLL 239
Query: 317 QINDLKNTPLPTKKELRIATKKAVDLLQDNYPEFVSKNS-------------------VS 357
QINDL N+P P+KKE+RIATK+AV LLQDNYPEFV++N
Sbjct: 240 QINDLSNSPGPSKKEIRIATKQAVGLLQDNYPEFVARNIFINVPFWYYALNALLSPFLTQ 299
Query: 358 KSQEQTHLCSNSKSNRHLAQSSMV--------GLNAKTMLNSQFKD-DVKEAVVKAGSEE 408
+++ + SK L + V GL + +D V E VVKAGS E
Sbjct: 300 RTKSKFVFVRPSKVTETLLKYICVEEIPVQYGGLKREKDTEFSIEDGGVTELVVKAGSTE 359
Query: 409 TIEIQAVEVGSTLIWDVTVSGWEVNYKEEFVPTDEGSYTIIVQKGRRIAYQEGTIRNTFT 468
TIEI EVG+TL+WD+TV GWEVNYKEEFVP DEGSYTII+QKG+++ QE +RN+F
Sbjct: 360 TIEIPVPEVGTTLVWDLTVLGWEVNYKEEFVPADEGSYTIIIQKGKKMGSQEEPVRNSFR 419
Query: 469 NKEPGKIVITIENGA 483
N EPGK+V+TIEN
Sbjct: 420 NNEPGKVVLTIENSV 434
>GSVIVT01036782001 assembled CDS
Length = 524
Score = 340 bits (871), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/341 (51%), Positives = 223/341 (65%), Gaps = 29/341 (8%)
Query: 173 NVEKAEPDQKVDRDIAIWGVPLLPSKGDDRTDVLLLKFLRAREFKANDAFEMLKNSLQWR 232
N+E + +VD +I +WGVPLLPSKGD TDV+LLKFLRAREFK +AFEML+N+L+W
Sbjct: 157 NIEIGKKAIEVDEEIKLWGVPLLPSKGDKGTDVILLKFLRAREFKVQEAFEMLRNTLKWI 216
Query: 233 KENKIDSILEEDLEADLGSMAYIAGNDRDGHPICYNIFAVLGNDDLYGKAF--EEKRGKF 290
K+N ID ILEE+ +L S+AY+ G DR GHPICYNIF ND++Y K F EE R KF
Sbjct: 217 KDNNIDIILEEEFPPELSSVAYMQGMDRKGHPICYNIFGTFLNDEIYNKTFGTEELRHKF 276
Query: 291 MRSRIQLMEKTIQKLDFNPGGVSATLQINDLKNTPLPTKKELRIATKKAVDLLQDNYPEF 350
+R R QLME+ I+KLDF GG ++ LQ+NDL+N+P PTKKELR A K+AV LLQDNYPEF
Sbjct: 277 LRWRFQLMERGIKKLDFGSGGATSMLQVNDLRNSPGPTKKELRQAMKQAVGLLQDNYPEF 336
Query: 351 VSKN-------------------SVSKSQEQTHLCSNSKSNRHL-----AQSSMVGLNAK 386
VS+N +S+ + ++ L AQ VG
Sbjct: 337 VSRNIFINVPFWSYAFYAVVSPFFTQRSKNKFDFARPARVTETLLKYIDAQQIPVGYGGF 396
Query: 387 TMLNS---QFKDDVKEAVVKAGSEETIEIQAVEVGSTLIWDVTVSGWEVNYKEEFVPTDE 443
N +D V E ++K GS I I A EVG+ W++TV GW+VNY+EEFVP DE
Sbjct: 397 HRENDPDFSIEDGVSEVIIKGGSSGAIAIPAPEVGTKFTWEITVLGWDVNYREEFVPKDE 456
Query: 444 GSYTIIVQKGRRIAYQEGTIRNTFTNKEPGKIVITIENGAF 484
GSYT+IVQK R++ ++EG IRN+FTNKE G +V+TI+N F
Sbjct: 457 GSYTMIVQKERKVGWEEGAIRNSFTNKEAGMLVLTIDNATF 497
>GSVIVT01028342001 assembled CDS
Length = 449
Score = 291 bits (744), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 149/329 (45%), Positives = 209/329 (63%), Gaps = 32/329 (9%)
Query: 185 RDIAIWGVPLLPSKGDDRTDVLLLKFLRAREFKANDAFEMLKNSLQWRKENKIDSILEED 244
DI++WGVPLLPSKG + TD++LLKFL+AR+FK ++AF ML+ +L WR+E K + ILEE+
Sbjct: 102 HDISLWGVPLLPSKGHEGTDIILLKFLKARDFKVSEAFNMLRRTLIWRREFKTEGILEEN 161
Query: 245 LEADLGSMAYIAGNDRDGHPICYNIFAVLGNDDLYGKAF--EEKRGKFMRSRIQLMEKTI 302
+L ++ YI D++GHP+CYN+ + D Y K F E K +F+R R+Q MEK I
Sbjct: 162 FGPELENVVYINSTDKEGHPLCYNVCGAFKDRDFYKKTFGSEAKCEEFLRWRVQSMEKVI 221
Query: 303 QKLDFNPGGVSATLQINDLKNTPLPTKKELRIATKKAVDLLQDNYPEFVSKNSV------ 356
Q L+F GGV + +QI DLKN+P P+ KELR+ TKKA+ LLQDNYPE + ++ V
Sbjct: 222 QNLNFTAGGVDSMVQILDLKNSPRPSNKELRLVTKKAITLLQDNYPELIFRHIVINVPFW 281
Query: 357 ---SKSQEQTHLCSNSKSNRHLAQSSMV------------------GLNAKTMLNSQFKD 395
S + + +KS LA+ S V GL + + D
Sbjct: 282 YYASHTLISKFISQRTKSKFILARPSGVADTLLKFIAPENLPVQYGGLKRENDIEFSPAD 341
Query: 396 DVKEAVVKAGSEETIEIQAVEVGSTLIWDVTVSGWEVNYKEEFVPTDEGSYTIIVQKGRR 455
E +VKAG+ E+IEI A E G T++WD+T+ GW+VNYKEEF+P DEGSY I+++K ++
Sbjct: 342 KALELIVKAGTIESIEIPATEAGVTVVWDMTIVGWDVNYKEEFIPEDEGSYKILLEKDKK 401
Query: 456 IAYQEGTIRNTFTNKEPGKIVITIENGAF 484
+ ++RN+F EPGKIVITIENG +
Sbjct: 402 MG---QSMRNSFYISEPGKIVITIENGTY 427
>GSVIVT01022428001 assembled CDS
Length = 398
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 205/334 (61%), Gaps = 38/334 (11%)
Query: 181 QKVDRD----IAIWGVPLLPSKGDDRTDVLLLKFLRAREFKANDAFEMLKNSLQWRKENK 236
+KVD D + IWG+ L+ D+R+DV+LLKFLRAR+FK +AF M+KN++QWRKE
Sbjct: 51 EKVDDDGAKTVFIWGIKLME---DERSDVILLKFLRARDFKVKEAFAMIKNTVQWRKEFG 107
Query: 237 IDSILEEDLEADLGSMAYIAGNDRDGHPICYNIFAVLGNDDLYGKAF--EEKRGKFMRSR 294
ID +++E+L DL + ++ G D++GHP+CYN++ N DLY K F EEKR KF+R R
Sbjct: 108 IDQLMDEELGNDLEKVVFMHGFDKEGHPVCYNVYGGFQNKDLYQKTFSDEEKRQKFLRWR 167
Query: 295 IQLMEKTIQKLDFNPGGVSATLQINDLKNTPLPTKKELRIATKKAVDLLQDNYPEFVSKN 354
IQ +EK+I+KLDF PGG+S +Q+NDLKN+P P K ELR ATK+A+ LLQDNYPEFV+K
Sbjct: 168 IQFLEKSIRKLDFTPGGISTIVQVNDLKNSPGPGKWELRQATKQALQLLQDNYPEFVAKQ 227
Query: 355 SVSKSQEQTHLCSNSKSNRHLAQ---SSMVGLNAKTMLNSQFK----------------- 394
+ + +L N + L Q S V + FK
Sbjct: 228 -IFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSAETLFKYIAAEQVPVKYGGLSKE 286
Query: 395 ------DDVKEAVVKAGSEETIEIQAVEVGSTLIWDVTVSGWEVNYKEEFVPTDEGSYTI 448
D V E VK +++T+E E L W+V V GWEV+Y EFVP+ E YT+
Sbjct: 287 GEFGTADAVTEITVKPATKQTVEFPVNET-CLLTWEVRVVGWEVSYGAEFVPSAEEGYTV 345
Query: 449 IVQKGRRIAY-QEGTIRNTFTNKEPGKIVITIEN 481
I+QK R++A +E + N+F EPGK+VITI+N
Sbjct: 346 IIQKARKMAGNEEPVVCNSFKIGEPGKVVITIDN 379
>GSVIVT01030264001 assembled CDS
Length = 429
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 185/326 (56%), Gaps = 54/326 (16%)
Query: 188 AIWGVPLLPSKGDDRTDVLLLKFLRAREFKANDAFEMLKNSLQWRKENKIDSILEEDL-- 245
++WG+PLL GD+R DV+LLKFLRAR+F+ D+F ML+ L WRKE D + EEDL
Sbjct: 109 SMWGIPLL--GGDERADVILLKFLRARDFRVADSFNMLEKCLAWRKEFGADDVAEEDLGF 166
Query: 246 -EADLGSMAYIAGNDRDGHPICYNIFAVLGNDDLYGKAFEEKRGKFMRSRIQLMEKTIQK 304
E + G +AY+ G DR+ HP+CYN + F+R R+Q++E+ I+
Sbjct: 167 KELE-GVVAYMHGYDREEHPVCYNAYG------------------FLRWRVQVLERGIKL 207
Query: 305 LDFNPGGVSATLQINDLKNTPLPTKKELRIATKKAVDLLQDNYPEFVSKN---------S 355
L F PGGV++ +Q+ DLK+ P K+ELR+A+ + + L QDNYPE V++ S
Sbjct: 208 LHFKPGGVNSIIQVTDLKDMP---KRELRVASNQILSLFQDNYPEMVARKIFINVPWYFS 264
Query: 356 VSKSQEQTHLCSNSKSNRHLAQSSMV------------------GLNAKTMLNSQFKDDV 397
+ S L +KS +++ V GL+ + L +
Sbjct: 265 ILYSMFSPFLTQRTKSKFVISKEGNVAETLYKFIRPEDVPVQYGGLSRPSDLQNGPPKPA 324
Query: 398 KEAVVKAGSEETIEIQAVEVGSTLIWDVTVSGWEVNYKEEFVPTDEGSYTIIVQKGRRIA 457
E VK G + I+I+ +E G+T+ WD+ V GW++ Y EFVP EGSYTI V+K R++A
Sbjct: 325 SEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKMA 384
Query: 458 YQEGTIRNTFTNKEPGKIVITIENGA 483
E + N+F ++E G++V++++N A
Sbjct: 385 PSEEAVHNSFMSREAGRLVLSVDNTA 410
>GSVIVT01026078001 assembled CDS
Length = 470
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 178/327 (54%), Gaps = 70/327 (21%)
Query: 186 DIAIWGVPLLPSKGDDRTDVLLLKFLRAREFKANDAFEMLKNSLQWRKENKIDSILEEDL 245
D++IWG+PLL D+R+D++LLKFLRAREFK +AF MLKN++ WRKE ID+++++DL
Sbjct: 112 DVSIWGIPLL---KDERSDMILLKFLRAREFKVKEAFAMLKNTIFWRKEFGIDALVDDDL 168
Query: 246 EADLGSMAYIAGNDRDGHPICYNIFAVLGNDDLYGKAFEEKRGKFMRSRIQLMEKTIQKL 305
L EKR KF+R RIQ +E++I+KL
Sbjct: 169 GEHL-----------------------------------EKRMKFLRWRIQFLERSIRKL 193
Query: 306 DFNPGGVSATLQINDLKNTPLPTKKELRIATKKAVDLLQDNYPEFVSKNS---------- 355
DF PGGV+ Q+NDLKN+P P K ELR ATK+A+ LLQDNYPEFV+K
Sbjct: 194 DFTPGGVNTIFQVNDLKNSPGPGKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLA 253
Query: 356 ---------VSKSQEQTHLCSNSKSNRHL--------AQSSMVGLNAKTM-LNSQF--KD 395
+++ + S +KS + L GL+ N F D
Sbjct: 254 FYMMISPFLTQRTKSKFVFASPAKSAKTLFKYISPEQVPIQYGGLSVDYCDCNPDFGIAD 313
Query: 396 DVKEAVVKAGSEETIEIQAVEVGSTLIWDVTVSGWEVNYKEEFVPTDEGSYTIIVQKGRR 455
V E VK +++T+EI E ++W+V V GWEV Y EF+P E YT++VQK +
Sbjct: 314 PVTEITVKPSTKQTVEILVSE-QCVIVWEVRVVGWEVAYGAEFIPDAEDEYTVVVQKATK 372
Query: 456 IAYQEGTIR-NTFTNKEPGKIVITIEN 481
+A + + N+F KE GKIVITI+N
Sbjct: 373 MAPTDDPVMCNSFKIKELGKIVITIDN 399
>GSVIVT01026077001 assembled CDS
Length = 274
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 143/258 (55%), Gaps = 33/258 (12%)
Query: 255 IAGNDRDGHPICYNIFAVLGNDDLYGKAF--EEKRGKFMRSRIQLMEKTIQKLDFNPGGV 312
+ G+ ++GHP+CYN + N +LY F EEKR F+R RIQ +EK+I+KLDF+P G+
Sbjct: 1 MEGSGKEGHPVCYNAYGKFLNKELYQNTFSDEEKRQNFLRWRIQFLEKSIRKLDFSPNGI 60
Query: 313 SATLQINDLKNTPLPTKKELRIATKKAVDLLQDNYPEFVSKNSVSKSQEQTHLCSNSKSN 372
+ +Q+NDLKN+P P K+ELR +T +A+ LLQDNYPEFV+K + + +L N +
Sbjct: 61 NTIIQVNDLKNSPGPFKRELRQSTNQALHLLQDNYPEFVAKQ-IFINVPWWYLAFNRMIS 119
Query: 373 RHLAQ---SSMVGLNAKTMLNSQFK-------------------------DDVKEAVVKA 404
L Q S V + FK D V +K
Sbjct: 120 PFLTQRTKSKFVFAGPSKSAETLFKYIAPEQVPVQYGGLKRDGDTEFSICDPVTLVTIKP 179
Query: 405 GSEETIEIQAVEVGSTLIWDVTVSGWEVNYKEEFVPTDEGSYTIIVQKGRRIA-YQEGTI 463
G + IE E LIW++ V GW+V Y EFVPT EG YT+IVQK R+IA E I
Sbjct: 180 GCKHVIEFPYSE-PCQLIWELRVIGWDVTYGAEFVPTVEGGYTVIVQKARKIAPTDEPVI 238
Query: 464 RNTFTNKEPGKIVITIEN 481
N+F EPGK+++TI+N
Sbjct: 239 SNSFKIGEPGKVILTIDN 256
>GSVIVT01020878001 assembled CDS
Length = 399
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 142/273 (52%), Gaps = 61/273 (22%)
Query: 186 DIAIWGVPLLPSKGDDRTDVLLLKFLRAREFKANDAFEMLK-NSLQWRKENKIDSILEED 244
D++IWG+PLL D+R+D++LLKFLRAREFK +AF MLK N++ WRKE ID+++++D
Sbjct: 112 DVSIWGIPLL---KDERSDMILLKFLRAREFKVKEAFAMLKKNTIFWRKEFGIDALVDDD 168
Query: 245 LEADLGSMAYIAGNDRDGHPICYNIFAVLGNDDLYGKAFEEKRGKFMRSRIQLMEKTIQK 304
L L EKR KF+R RIQ +E++I+K
Sbjct: 169 LGEHL-----------------------------------EKRMKFLRWRIQFLERSIRK 193
Query: 305 LDFNPGGVSATLQINDLKNTPLPTKKELRIATKKAVDLLQDNYPEFVSKNSVSKSQEQTH 364
LDF PGGV+ Q+NDLKN+P P K ELR ATK+A+ LLQDNYPEFV+K
Sbjct: 194 LDFTPGGVNTIFQVNDLKNSPGPGKWELRQATKQALQLLQDNYPEFVAKQV--------- 244
Query: 365 LCSNSKSNRHLAQSSMVGLNAKTMLNSQFKDDVKEAVVKAGSEETIEIQAVEVGSTLIWD 424
L M++ K V A S ++ + +
Sbjct: 245 ----------FINVPWWYLAFYMMISPFLTQRTKNKFVFASSAKSAKTLFKYISPK---Q 291
Query: 425 VTVSGWEVNYKEEFVPTDEGSYTIIVQKGRRIA 457
V V GWEV Y EF+P E YT++VQK ++A
Sbjct: 292 VRVVGWEVAYGAEFIPDAEDEYTVVVQKATKMA 324
>GSVIVT01023815001 assembled CDS
Length = 625
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 194 LLPSKGDDRTDVLLLKFLRAREFKANDAFEMLKNSLQWRKENKIDSILEEDLEADLGSM- 252
LLP+K DD ++L+FL+AR+F A M + +QWRK+ D+ILE+ +L +
Sbjct: 100 LLPTKHDDYH--MMLRFLKARKFDIEKAKHMWTDMIQWRKDFGADTILEDFEFKELNEVL 157
Query: 253 -AYIAGN---DRDGHPICYNIFAVLGNDDLYGKAFEEKRGKFMRSRIQLMEKTIQKLDFN 308
Y G+ D++G P+ LG D Y ++++ +Q EK+ L F
Sbjct: 158 KYYPHGHHGVDKEGRPV---YIERLGKVDPYKLMQVTTMDRYVKYHVQEFEKSFA-LKFP 213
Query: 309 PGGVSATLQINDLKNTPLPTKK-ELRIATKKAVDLLQ-------DNYPE 349
++A I D T L + + TK A DL+ DNYPE
Sbjct: 214 ACTIAAKRHI-DSSTTILDVQGVGFKNLTKAARDLIMRLQKIDGDNYPE 261
>GSVIVT01018887001 assembled CDS
Length = 586
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 169 IDENNVEKAEPDQKVDR-DIAIWGVPLLPSKGDDRTDVLLLKFLRAREFKANDAFEMLKN 227
+D +V AE Q VD A+ LPS+ DD +LL+FL+AR+F +M +
Sbjct: 50 VDIEDVHDAEELQAVDALRQALISEDRLPSRHDDYH--MLLRFLKARKFDLEKTKQMWID 107
Query: 228 SLQWRKENKIDSILEEDLEADLGSMA--YIAGN---DRDGHPICYNIFAVLGNDDLYGKA 282
LQWRK+ D+I+E+ +L + Y G+ D++G P+ LG D
Sbjct: 108 MLQWRKDFGADTIMEDFEFKELNEVIEHYPQGHHGVDKEGRPV---YIERLGKVDANKLM 164
Query: 283 FEEKRGKFMRSRIQLMEKTIQKLDFNPGGVSATLQINDLKNTPLPTKK-ELRIATKKAVD 341
++++ +Q E+T + F +SA QI D T L + L+ TK A +
Sbjct: 165 QATTMDRYVKYHVQEFERTFV-IKFPSCSISARKQI-DQSTTILDVQGVGLKHFTKSARE 222
Query: 342 LL-------QDNYPEFVSK 353
L+ DNYPE +++
Sbjct: 223 LIVNLQKVDGDNYPETLNR 241