Jatropha Genome Database

JcCB0235321.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0235321.10 - phase: 0 
         (220 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01008688001 assembled CDS                                       406   e-114
GSVIVT01023920001 assembled CDS                                       382   e-107
GSVIVT01025695001 assembled CDS                                       332   9e-92
GSVIVT01025206001 assembled CDS                                       329   5e-91
GSVIVT01033934001 assembled CDS                                       322   1e-88
GSVIVT01009880001 assembled CDS                                       313   4e-86
GSVIVT01035377001 assembled CDS                                       287   3e-78
GSVIVT01032119001 assembled CDS                                       286   6e-78
GSVIVT01025449001 assembled CDS                                       281   1e-76
GSVIVT01033302001 assembled CDS                                       272   9e-74
GSVIVT01023515001 assembled CDS                                       122   1e-28

>GSVIVT01008688001 assembled CDS
          Length = 214

 Score =  406 bits (1044), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 195/214 (91%), Positives = 207/214 (96%)

Query: 7   VVKSRFKRVCVFCGSSTGKKDCYRDAALELGKELVSRRLDLVYGGGSAGLMGLVSQEVHR 66
           +V+SRFKRVCVFCGSSTGK++CYRDAA+EL +ELVSRRLDLVYGGGS GLMGLVSQEVHR
Sbjct: 1   MVRSRFKRVCVFCGSSTGKRNCYRDAAIELAQELVSRRLDLVYGGGSVGLMGLVSQEVHR 60

Query: 67  GGGHVLGIIPKTLMRKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELL 126
           GGGHVLGIIPKTLM KEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELL
Sbjct: 61  GGGHVLGIIPKTLMCKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELL 120

Query: 127 EVITWAQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDGFIMPSQRSIIVSAPNAKELVQK 186
           EVITWAQLGIHDKPVGLLNVDGYYN LLTFIDKAVDDGFI PSQR IIVSAPNA+ELVQK
Sbjct: 121 EVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNARELVQK 180

Query: 187 LEDYVPLHDGVVAKAKWEAEQVELNARLQIEIAR 220
           LE+YVP+HDGVVAKA+WEAEQ+ELNA LQI+IAR
Sbjct: 181 LEEYVPVHDGVVAKARWEAEQLELNASLQIDIAR 214


>GSVIVT01023920001 assembled CDS
          Length = 229

 Score =  382 bits (980), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/206 (89%), Positives = 195/206 (94%), Gaps = 2/206 (0%)

Query: 1   MEEKRGVVKSRFKRVCVFCGSSTGKKDCYRDAALELGKELVSRRLDLVYGGGSAGLMGLV 60
           MEEK  VV SRFK VCVFCGSSTGK++CYRDAA+ELG+ELV+RRLDLVYGGGS GLMGLV
Sbjct: 1   MEEK--VVYSRFKSVCVFCGSSTGKRNCYRDAAVELGQELVARRLDLVYGGGSIGLMGLV 58

Query: 61  SQEVHRGGGHVLGIIPKTLMRKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYG 120
           SQ VHRGGGHVLGIIP+TLM KEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYG
Sbjct: 59  SQAVHRGGGHVLGIIPRTLMCKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYG 118

Query: 121 TLEELLEVITWAQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDGFIMPSQRSIIVSAPNA 180
           TLEELLEVITWAQLGIHDKPVGLLNVDGYYN LLTFIDKAVDDGFI PSQR IIVSAPNA
Sbjct: 119 TLEELLEVITWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIIVSAPNA 178

Query: 181 KELVQKLEDYVPLHDGVVAKAKWEAE 206
           KELVQKLE+YVP+HDGV+AKA+WE E
Sbjct: 179 KELVQKLEEYVPVHDGVIAKARWEVE 204


>GSVIVT01025695001 assembled CDS
          Length = 218

 Score =  332 bits (851), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 158/209 (75%), Positives = 181/209 (86%)

Query: 1   MEEKRGVVKSRFKRVCVFCGSSTGKKDCYRDAALELGKELVSRRLDLVYGGGSAGLMGLV 60
           ME +  V +S+FKR+CVFCGSS GKK  Y+DAA++LGKELVSR +DLVYGGGS GLMGLV
Sbjct: 1   MEIEAEVEQSKFKRICVFCGSSQGKKTSYQDAAIQLGKELVSRNIDLVYGGGSIGLMGLV 60

Query: 61  SQEVHRGGGHVLGIIPKTLMRKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYG 120
           SQ VH GG HV+G+IPKTLM +E+TG TVGEV+ VADMHQRKAEMA+HSD FIALPGGYG
Sbjct: 61  SQAVHNGGRHVIGVIPKTLMPRELTGVTVGEVKAVADMHQRKAEMAKHSDAFIALPGGYG 120

Query: 121 TLEELLEVITWAQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDGFIMPSQRSIIVSAPNA 180
           TLEELLEVI WAQLGIHDKPVGLLNVDGYYN LL+FIDKAV++GFI PS R IIVSAP A
Sbjct: 121 TLEELLEVIAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPSARHIIVSAPTA 180

Query: 181 KELVQKLEDYVPLHDGVVAKAKWEAEQVE 209
           +ELV+KLE+YVP H GV +K  WE EQ++
Sbjct: 181 EELVKKLEEYVPSHQGVASKLSWEMEQLD 209


>GSVIVT01025206001 assembled CDS
          Length = 212

 Score =  329 bits (844), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 154/208 (74%), Positives = 181/208 (87%)

Query: 9   KSRFKRVCVFCGSSTGKKDCYRDAALELGKELVSRRLDLVYGGGSAGLMGLVSQEVHRGG 68
           +S+FKR+CVFCGSS GKK  Y+DAA+ELG+ELVSR +DLVYGGGS GLMGL+SQ V+ GG
Sbjct: 3   QSKFKRICVFCGSSQGKKSSYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYDGG 62

Query: 69  GHVLGIIPKTLMRKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEV 128
            HV+G+IPKTLM +EITGETVGEV+ VADMHQRKAEMARHSD FIALPGGYGTLEELLEV
Sbjct: 63  RHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEV 122

Query: 129 ITWAQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDGFIMPSQRSIIVSAPNAKELVQKLE 188
           ITWAQLGIHDKPVGLLNVDGYYN LL+FIDKAV++ FI PS R IIVSAP A+EL++KLE
Sbjct: 123 ITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEDFISPSARHIIVSAPTARELMKKLE 182

Query: 189 DYVPLHDGVVAKAKWEAEQVELNARLQI 216
           +Y P H+GV +K  WE EQ+  + + ++
Sbjct: 183 EYFPRHEGVASKLSWETEQLGYSPKCEL 210


>GSVIVT01033934001 assembled CDS
          Length = 216

 Score =  322 bits (824), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 152/201 (75%), Positives = 175/201 (87%)

Query: 8   VKSRFKRVCVFCGSSTGKKDCYRDAALELGKELVSRRLDLVYGGGSAGLMGLVSQEVHRG 67
            +SRFKR+CVFCGSS+GKK  Y++AA+ELGKELV RR+DLVYGGGS GLMGLVSQ VH G
Sbjct: 4   TRSRFKRICVFCGSSSGKKASYQEAAVELGKELVERRIDLVYGGGSVGLMGLVSQAVHDG 63

Query: 68  GGHVLGIIPKTLMRKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLE 127
           G HVLG+IP+TLM +EITGETVGEVR V+ MH+RKAEMAR +D FIALPGGYGTLEELLE
Sbjct: 64  GRHVLGVIPRTLMPREITGETVGEVRAVSHMHERKAEMARQADAFIALPGGYGTLEELLE 123

Query: 128 VITWAQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDGFIMPSQRSIIVSAPNAKELVQKL 187
           VITWAQLGIH KPVGLLNVDGYYN LL+FIDKAVD+GF+ P+ R IIVSAP AKELV++L
Sbjct: 124 VITWAQLGIHKKPVGLLNVDGYYNSLLSFIDKAVDEGFVSPTARRIIVSAPTAKELVREL 183

Query: 188 EDYVPLHDGVVAKAKWEAEQV 208
           E+YVP HD V +K  WE  ++
Sbjct: 184 EEYVPEHDEVTSKLIWEEVEI 204


>GSVIVT01009880001 assembled CDS
          Length = 216

 Score =  313 bits (802), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 154/214 (71%), Positives = 176/214 (82%), Gaps = 1/214 (0%)

Query: 7   VVKSRFKRVCVFCGSSTGKKDCYRDAALELGKELVSRRLDLVYGGGSAGLMGLVSQEVHR 66
           ++ SRFKRVCVFCGSS GK   Y+ AA++L  +LV R++DLVYGGGS GLMGLVSQ V+ 
Sbjct: 4   LLPSRFKRVCVFCGSSPGKNPSYQLAAIQLANQLVERKIDLVYGGGSIGLMGLVSQAVYD 63

Query: 67  GGGHVLGIIPKTLMRKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELL 126
           GG HVLG+IPKTLM +EITGETVGEVR V+ MHQRKAEMAR +D FIALPGGYGTLEELL
Sbjct: 64  GGRHVLGVIPKTLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELL 123

Query: 127 EVITWAQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDGFIMPSQRSIIVSAPNAKELVQK 186
           EVITWAQLGIHDKPVGLLNVDGYYN LL+FIDKAVD+GFI  + R IIVSAP A+EL+ K
Sbjct: 124 EVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFITAAARQIIVSAPTAQELLCK 183

Query: 187 LEDYVPLHDGVVAKAKWEAEQVELNARLQIEIAR 220
           LE+YVP H GV  K  WE EQ +L    + +IAR
Sbjct: 184 LEEYVPKHSGVAPKLSWEMEQ-QLGYATKSDIAR 216


>GSVIVT01035377001 assembled CDS
          Length = 217

 Score =  287 bits (734), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 134/207 (64%), Positives = 163/207 (78%), Gaps = 1/207 (0%)

Query: 1   MEEKRGVVKSRFKRVCVFCGSSTGKKDCYRDAALELGKELVSRRLDLVYGGGSAGLMGLV 60
           MEEK    +S+FKRVCVFCGS++G +  + DAALELG ELV R+++LVYGGGS GLMGL+
Sbjct: 1   MEEKSNT-RSKFKRVCVFCGSNSGNRKVFSDAALELGNELVKRKINLVYGGGSVGLMGLI 59

Query: 61  SQEVHRGGGHVLGIIPKTLMRKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYG 120
           SQ V+ G  HVLG+IP+ LM  EI+G+TVGEVR V+DMH+RKAEMA+ +D FIALPGGYG
Sbjct: 60  SQTVYDGDCHVLGVIPRALMPLEISGQTVGEVRIVSDMHERKAEMAQEADAFIALPGGYG 119

Query: 121 TLEELLEVITWAQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDGFIMPSQRSIIVSAPNA 180
           T+EELLE+ITW+QLGIH KPVGLLNVDGYYN LL   D  V +GFI P  R I+VSAP A
Sbjct: 120 TMEELLEMITWSQLGIHKKPVGLLNVDGYYNFLLALFDNGVKEGFIKPGARHIVVSAPTA 179

Query: 181 KELVQKLEDYVPLHDGVVAKAKWEAEQ 207
           KEL+ K+E Y P H+ V +   W+ EQ
Sbjct: 180 KELLVKMEQYTPAHEHVASHESWQMEQ 206


>GSVIVT01032119001 assembled CDS
          Length = 215

 Score =  286 bits (732), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 129/200 (64%), Positives = 164/200 (82%)

Query: 9   KSRFKRVCVFCGSSTGKKDCYRDAALELGKELVSRRLDLVYGGGSAGLMGLVSQEVHRGG 68
           K RFKR+CVFCGS  G K  + +AAL+LG  LV R++DLVYGGGS GLMGL+SQ V  GG
Sbjct: 15  KQRFKRICVFCGSRPGYKSAFSEAALQLGNLLVERKIDLVYGGGSVGLMGLISQTVFNGG 74

Query: 69  GHVLGIIPKTLMRKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEV 128
            HVLG+IP+ L+  EI+GET+GEV+ VADMHQRK+EMA+++D FIALPGGYGT+EELLE+
Sbjct: 75  CHVLGVIPRALLPHEISGETIGEVKTVADMHQRKSEMAKNADAFIALPGGYGTMEELLEM 134

Query: 129 ITWAQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDGFIMPSQRSIIVSAPNAKELVQKLE 188
           ITW+QLGIH+KPVGLLNVDGYYN LLT  DK V++GFI  S R+I++SA  A+EL++K+E
Sbjct: 135 ITWSQLGIHEKPVGLLNVDGYYNSLLTLFDKGVEEGFIEDSARNIMISATTAEELIKKME 194

Query: 189 DYVPLHDGVVAKAKWEAEQV 208
           +Y P+HD V  +  WE +Q+
Sbjct: 195 EYAPVHDRVAPRQTWEVDQL 214


>GSVIVT01025449001 assembled CDS
          Length = 205

 Score =  281 bits (720), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 129/195 (66%), Positives = 159/195 (81%)

Query: 11  RFKRVCVFCGSSTGKKDCYRDAALELGKELVSRRLDLVYGGGSAGLMGLVSQEVHRGGGH 70
           +FKRVCV+CGS++G +  + DAAL+LG+E+V RR+DL+YGGGS GLMGLVSQ+V+ GG H
Sbjct: 3   KFKRVCVYCGSNSGNRKIFSDAALDLGREMVERRMDLIYGGGSVGLMGLVSQKVYDGGCH 62

Query: 71  VLGIIPKTLMRKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVIT 130
           VLG+IP+ L+  EI+G  VG+V  V+DMH+RKAEMA  +D FIALPGGYGT+EELLEVI 
Sbjct: 63  VLGVIPRALVPIEISGHAVGQVVIVSDMHERKAEMASRADAFIALPGGYGTMEELLEVIA 122

Query: 131 WAQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDGFIMPSQRSIIVSAPNAKELVQKLEDY 190
           WAQLGIHDKPVGLLNVDGYY+ LL   DK V++GFI PS RSI+VSA  A+EL+QK+EDY
Sbjct: 123 WAQLGIHDKPVGLLNVDGYYDCLLGLFDKGVEEGFIKPSARSIVVSAKTARELIQKMEDY 182

Query: 191 VPLHDGVVAKAKWEA 205
           +P HD V     W A
Sbjct: 183 IPFHDQVAPTQSWNA 197


>GSVIVT01033302001 assembled CDS
          Length = 222

 Score =  272 bits (695), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 123/196 (62%), Positives = 158/196 (80%)

Query: 12  FKRVCVFCGSSTGKKDCYRDAALELGKELVSRRLDLVYGGGSAGLMGLVSQEVHRGGGHV 71
           FKR+CVFCGS  G K  + DA + LGK+LV R +DLVYGGGS GLMGL+S+ V  GG HV
Sbjct: 16  FKRICVFCGSKPGSKSIFSDATVALGKQLVERNIDLVYGGGSKGLMGLISKTVLDGGRHV 75

Query: 72  LGIIPKTLMRKEITGETVGEVRPVADMHQRKAEMARHSDCFIALPGGYGTLEELLEVITW 131
           LGIIPK LM  EITG+T+G+++ V+ MH+RK+EMA+ +D FIALPGGYGT+EELLE++TW
Sbjct: 76  LGIIPKALMPYEITGKTIGDIKIVSSMHERKSEMAKRADAFIALPGGYGTMEELLEMVTW 135

Query: 132 AQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDGFIMPSQRSIIVSAPNAKELVQKLEDYV 191
           +QLGIH KPVGLLNVDGY+N L+   DK V++GFI+ S+R IIVSA  A+EL++K+E+Y 
Sbjct: 136 SQLGIHGKPVGLLNVDGYFNSLIELFDKGVEEGFIVDSERHIIVSADTAEELMKKMEEYA 195

Query: 192 PLHDGVVAKAKWEAEQ 207
           P+HD V ++  WE EQ
Sbjct: 196 PVHDAVTSRRSWEEEQ 211


>GSVIVT01023515001 assembled CDS
          Length = 80

 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/103 (61%), Positives = 69/103 (66%), Gaps = 24/103 (23%)

Query: 105 MARHSDCFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNLLLTFIDKAVDDG 164
           M RHSDC IALP                        +G LNVDGYYN LLTFIDKAVDDG
Sbjct: 1   MTRHSDCLIALP------------------------IGFLNVDGYYNYLLTFIDKAVDDG 36

Query: 165 FIMPSQRSIIVSAPNAKELVQKLEDYVPLHDGVVAKAKWEAEQ 207
           FI PSQR IIVSAPNAK+LVQKLE+YV +HD V+AKA+ E EQ
Sbjct: 37  FIKPSQRHIIVSAPNAKKLVQKLEEYVLVHDRVIAKARQEVEQ 79