Jatropha Genome Database
- JcCB0226331.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0226331.10 - phase: 0 /partial
(227 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01020167001 assembled CDS 322 8e-89
GSVIVT01037810001 assembled CDS 132 1e-31
GSVIVT01009139001 assembled CDS 116 8e-27
GSVIVT01003175001 assembled CDS 105 1e-23
GSVIVT01009432001 assembled CDS 103 5e-23
GSVIVT01009353001 assembled CDS 103 7e-23
GSVIVT01003610001 assembled CDS 102 1e-22
GSVIVT01006022001 assembled CDS 100 4e-22
GSVIVT01000226001 assembled CDS 100 4e-22
GSVIVT01000451001 assembled CDS 96 2e-20
GSVIVT01003674001 assembled CDS 96 2e-20
GSVIVT01000125001 assembled CDS 95 3e-20
GSVIVT01034128001 assembled CDS 93 9e-20
GSVIVT01003494001 assembled CDS 82 2e-16
>GSVIVT01020167001 assembled CDS
Length = 324
Score = 322 bits (826), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 162/220 (73%), Positives = 178/220 (80%), Gaps = 6/220 (2%)
Query: 1 QTKGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWR 60
QT GWP+QLLSVACLSLAAKMEE LVPSLLDLQVEGAK+IFE +TIRRMELLVL VLDWR
Sbjct: 111 QTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKFIFESKTIRRMELLVLGVLDWR 170
Query: 61 LRSVTPFSFLDFFACKLDSSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXXX 120
LRS+TPFSF+ FFA KLDSS + IGFLISRA +IILSN+QEASFLEYWPS
Sbjct: 171 LRSITPFSFIGFFAYKLDSSGSVIGFLISRATQIILSNIQEASFLEYWPSCIAAAAILCA 230
Query: 121 XNEIPKLSLVNPELAESWCDGLSKEKIISCYQLMQDLVLDNSRRKPPKVLPLLRVTIRAR 180
NEIPKLSLV+PE AESWCDGLSKEKIISCYQLMQ++ +DN+RRKPPK+LP LRVTIRAR
Sbjct: 231 ANEIPKLSLVDPERAESWCDGLSKEKIISCYQLMQEITVDNNRRKPPKLLPQLRVTIRAR 290
Query: 181 MRXXXXXXXXXXXXXXXXXXYKRRKLNNCLWVDDDKGNSE 220
+R YKRRKLNNCLWVDDDKGN +
Sbjct: 291 VR------SSGSSSSSSSSSYKRRKLNNCLWVDDDKGNGD 324
>GSVIVT01037810001 assembled CDS
Length = 354
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 4/174 (2%)
Query: 1 QTKGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWR 60
Q GWP QLLSVACLSLAAKMEE VP LLDLQ+ K++FEP+TI+RMEL V++ L+WR
Sbjct: 125 QGNGWPFQLLSVACLSLAAKMEETHVPLLLDLQMFQTKFVFEPKTIQRMELWVMANLNWR 184
Query: 61 LRSVTPFSFLDFFACKLDSSSTYIGFLISR----AKEIILSNMQEASFLEYWPSSXXXXX 116
LRSVTPF F+D+FA KL SS L++R + ++IL+ + FL + PS
Sbjct: 185 LRSVTPFDFIDYFASKLPCSSASRHDLLTRVFSVSADLILNTTRVVDFLGFSPSVIAAAA 244
Query: 117 XXXXXNEIPKLSLVNPELAESWCDGLSKEKIISCYQLMQDLVLDNSRRKPPKVL 170
+ ES+ + + +E + SC+QLM++ ++D P K L
Sbjct: 245 VISASGKRVDFPAGGDWTPESFYERVDREVVRSCHQLMEEYLIDTCPSAPLKDL 298
>GSVIVT01009139001 assembled CDS
Length = 355
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Query: 1 QTKGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWR 60
+ K W QLL+VACLSLAAKMEE VP LDLQV ++++FE RTI+RMELLVL L WR
Sbjct: 138 KGKAWMAQLLAVACLSLAAKMEENEVPLCLDLQVAESRFVFEARTIQRMELLVLRTLKWR 197
Query: 61 LRSVTPFSFLDFFACKLDSSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXXX 120
+++VTPFSF+D+F +++ I + ++ILS ++ FLE+ PS
Sbjct: 198 MQAVTPFSFVDYFLRRINDDEFPARTSILLSIQLILSTVKGIDFLEFRPSEIAAAVAISI 257
Query: 121 XNEIPKLSLVNPELAESWC-DGLSKEKIISCYQLMQDLVL 159
E V+ E A S + + KE+++ C +LM DL L
Sbjct: 258 AGET---QTVDIEKAISVVIEPIEKERVLKCIELMHDLSL 294
>GSVIVT01003175001 assembled CDS
Length = 374
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 88/155 (56%), Gaps = 6/155 (3%)
Query: 3 KGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLR 62
K W +QL +V CLSLAAK+EE VP LLDLQVE +KY+FE +TI+RMELLVLS L W++
Sbjct: 137 KPWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQRMELLVLSTLQWKMN 196
Query: 63 SVTPFSFLDFFACKLDSSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXXXXN 122
VTP SF+D +L + + + +LS + ++ F+ Y PS N
Sbjct: 197 PVTPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVVADSRFVRYLPSVLATATMLHVIN 256
Query: 123 EIPKLSLVNPELAESWCDG---LSKEKIISCYQLM 154
+ NP ++ G + K+K+ C+QL+
Sbjct: 257 HVEP---CNPIEYQNQLLGILKIDKDKVTECHQLI 288
>GSVIVT01009432001 assembled CDS
Length = 372
Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 86/156 (55%)
Query: 3 KGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLR 62
K W QL +VACLSLAAK+EE VP LLDLQVE Y+FE +TI+RME++VLS L W++
Sbjct: 139 KPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEETMYVFEAKTIQRMEIMVLSTLRWKMN 198
Query: 63 SVTPFSFLDFFACKLDSSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXXXXN 122
VTP SFLD+ +L + + R + ++LS + + F Y PS +
Sbjct: 199 PVTPLSFLDYITRRLGLKNHLCWEFLKRCERLLLSVLSDCRFGCYLPSVIATAIMLHVID 258
Query: 123 EIPKLSLVNPELAESWCDGLSKEKIISCYQLMQDLV 158
+ V + G+ K+K+ C QL+ D+
Sbjct: 259 SVEPCIRVQYQSQLLGILGIDKDKVEDCSQLILDIA 294
>GSVIVT01009353001 assembled CDS
Length = 317
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 94/156 (60%), Gaps = 4/156 (2%)
Query: 3 KGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLR 62
K W ++LLSVACLSLAAKMEE P+L + VE +Y FE + I+RMELLVL+ L+WR+
Sbjct: 108 KTWAIRLLSVACLSLAAKMEECRAPALSEFAVE--EYNFESKVIQRMELLVLNTLEWRMG 165
Query: 63 SVTPFSFLDFFACKLDSSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXXXXN 122
S+TPF+F+ +F K + S ++SR ++ ++ M+E + +++ PS +
Sbjct: 166 SITPFAFIHYFITKFCNQSPPPN-VVSRTVQLTMAIMREINLMDHRPSVIAAAAVLVALD 224
Query: 123 E-IPKLSLVNPELAESWCDGLSKEKIISCYQLMQDL 157
+ + + L + A S C L E + SCY ++Q L
Sbjct: 225 QRLTRNELESKMNAISSCGSLQPEDVFSCYSVVQGL 260
>GSVIVT01003610001 assembled CDS
Length = 353
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 5 WPMQLLSVACLSLAAKMEEALVPSLLDLQVEG-AKYIFEPRTIRRMELLVLSVLDWRLRS 63
W ++LLSVACLS+AAK+EE VP ++LQ G + +FE +TIRRMELLVL+ L W++++
Sbjct: 139 WIVRLLSVACLSVAAKVEETNVPLSIELQEVGDPRLMFEAKTIRRMELLVLTHLKWKMQA 198
Query: 64 VTPFSFLDFFACKLDSSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXXXXNE 123
TP SF+D+F K++ G LISR+ ++ILS ++ FLE+ S E
Sbjct: 199 FTPCSFIDYFLSKVNDHKYPSGSLISRSIQLILSTIKGIDFLEFKASEIAAAVAICVSEE 258
Query: 124 IPKLSLVNPELAESWCDGLSKEKIISCYQLMQDLVL 159
I + + A S + + +++ C QL+Q+ L
Sbjct: 259 IQDI-----DKAMSCLIHVDEGRVLKCVQLIQNAAL 289
>GSVIVT01006022001 assembled CDS
Length = 305
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 99/171 (57%), Gaps = 6/171 (3%)
Query: 1 QTKGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWR 60
Q K W +QLLSVAC+++AAKMEE VP LLDLQV +++F T+++MELLV++VL WR
Sbjct: 109 QGKEWSLQLLSVACIAVAAKMEERSVPLLLDLQVMEPRFLFTAMTVQQMELLVMAVLKWR 168
Query: 61 LRSVTPFSFLDFFACKLDSSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXXX 120
L +VTPFSF+++F K S+ S ++IL++ + L++ PSS
Sbjct: 169 LSTVTPFSFVNYFISKFPCFSSQFHS-SSNVSDLILASCRVTDHLDFLPSSIAAASLLWV 227
Query: 121 XNEIPKLSLVNPELAESWCDGLSKEKIISCYQLMQDLVLDNSRRKPPKVLP 171
+ V+ ++ E + ++KE + C+ L++ + R K ++ P
Sbjct: 228 AGKN-----VDDQILEHFHKRVNKEMVKRCHYLIKQSMCSMVRVKRQRLEP 273
>GSVIVT01000226001 assembled CDS
Length = 309
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 85/152 (55%)
Query: 3 KGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLR 62
K W QL +V CLSLAAK++E VP LLDLQVE KY+FE +TI+RMELLVLS L W++
Sbjct: 74 KPWMSQLAAVTCLSLAAKVDETDVPLLLDLQVEETKYVFEAKTIQRMELLVLSSLQWKMN 133
Query: 63 SVTPFSFLDFFACKLDSSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXXXXN 122
VTP SF D +L + + R + ++LS + ++ FL Y PS+
Sbjct: 134 PVTPISFFDHIIRRLGLKTHLHWEFLERCERLLLSVIADSRFLCYLPSTLATATMLHIIT 193
Query: 123 EIPKLSLVNPELAESWCDGLSKEKIISCYQLM 154
E+ + + + +SK + CY+L+
Sbjct: 194 EVEPCNPLEYQNQLLSVLKISKNDVDDCYKLI 225
>GSVIVT01000451001 assembled CDS
Length = 315
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 3 KGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLR 62
K W ++LL+V+C+SLAAKM++ SL D Q EG +IF+ TI RME+LVL L WR+R
Sbjct: 89 KPWILRLLAVSCVSLAAKMKKTEF-SLADFQGEGG-FIFDSETIMRMEILVLGALKWRMR 146
Query: 63 SVTPFSFLDFFACKLD-SSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXXXX 121
SVTPFSF+ FF + L +R EIIL + +E L++ PS
Sbjct: 147 SVTPFSFISFFISLFKLKDPPLLEALKARVIEIILKSQKEIKLLQFKPSIIAASTLLYAC 206
Query: 122 NEIPKLSLVNPELAESWCDGLSKEKIISCYQLMQDL 157
+E+ L A S C ++KEK++ CY ++++
Sbjct: 207 HELFPLQFPCFMTAISNCPYVNKEKMLCCYSAVREM 242
>GSVIVT01003674001 assembled CDS
Length = 407
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 91/161 (56%), Gaps = 3/161 (1%)
Query: 1 QTKGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWR 60
+ K W ++LL ++CLSLAAKM++ + S D Q + +IF+ + I RMELL+LS L+WR
Sbjct: 160 EEKPWILRLLVISCLSLAAKMKK-IDFSYSDFQKDEG-FIFDAQRIHRMELLILSTLNWR 217
Query: 61 LRSVTPFSFLDFFACKLD-SSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXX 119
+RS+TPFSF+ FF + L RA E+I E LEY PS
Sbjct: 218 MRSITPFSFVYFFISLFELKDPALTKALKDRATELIFKARDEIKLLEYKPSIIAASALLC 277
Query: 120 XXNEIPKLSLVNPELAESWCDGLSKEKIISCYQLMQDLVLD 160
E+ L + + A S C+ +++E + +CY +M+++V +
Sbjct: 278 ASYELFPLQFSSFKAAISSCEYINQESLNNCYHVMEEMVTN 318
>GSVIVT01000125001 assembled CDS
Length = 330
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Query: 5 WPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLRSV 64
W LLSVACLSLAAKMEE VP+L + VEG Y F+ + IRRMEL+VL L+W++ S+
Sbjct: 121 WATGLLSVACLSLAAKMEELRVPNLSEFPVEG--YYFDNKVIRRMELMVLETLEWKMLSI 178
Query: 65 TPFSFLDFFACKLDSSSTYIGFLISRAKEIILSNMQEASFLEYWPSSXXXXXXXXXXN-E 123
TPF F+ F K S L+SR E++L+ +E + +++ PS + +
Sbjct: 179 TPFDFIPCFINKFCGESKSKE-LVSRTMELLLAITREVNLMDHRPSVIAAAAVLAAFDGQ 237
Query: 124 IPKLSLVNPELAESWCDGLSKEKIISCYQLMQDLVLDNSRRKPPKVL 170
+ + ++ S E I SCY+L+Q++ + S K PK L
Sbjct: 238 LTRKTMDCKMSVISLWGSRENEHIFSCYRLLQEIEMGKS--KTPKQL 282
>GSVIVT01034128001 assembled CDS
Length = 338
Score = 93.2 bits (230), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 3 KGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLR 62
K W ++LLSVACLS+A+K E+ PS ++Q+E ++ FE TI+RMEL +L L WRLR
Sbjct: 117 KYWMVELLSVACLSVASKFTESFTPSFDEIQMEDLEHSFESSTIQRMELTLLQALGWRLR 176
Query: 63 SVTPFSFLDFFACKLDSSSTYIGF-LISRAKEIILSNMQEASFLEYWPS 110
S TP++F + +DS Y+ LI+R +++L ++ ++ FL++ PS
Sbjct: 177 STTPYTFAELLLWSIDSLQPYLHQELITRVTDLLLHSLSDSKFLDFRPS 225
>GSVIVT01003494001 assembled CDS
Length = 378
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%)
Query: 3 KGWPMQLLSVACLSLAAKMEEALVPSLLDLQVEGAKYIFEPRTIRRMELLVLSVLDWRLR 62
K W +QL +V CLSLAAK+EE V LL LQVE +Y FE +TI+RM+ LVLS W++
Sbjct: 58 KPWMIQLAAVTCLSLAAKVEETQVSLLLGLQVEDNEYAFEAKTIQRMDFLVLSTFQWKMN 117
Query: 63 SVTPFSFLDFFACKL 77
VTP SF+D +L
Sbjct: 118 PVTPLSFIDLIIRRL 132