Jatropha Genome Database
- JcCB0155711.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0155711.10 + phase: 0 /pseudo/partial
(283 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01012247001 assembled CDS 203 9e-53
GSVIVT01008556001 assembled CDS 143 8e-35
GSVIVT01010522001 assembled CDS 142 3e-34
GSVIVT01033519001 assembled CDS 135 2e-32
GSVIVT01010496001 assembled CDS 131 4e-31
GSVIVT01032239001 assembled CDS 128 4e-30
GSVIVT01018205001 assembled CDS 126 1e-29
GSVIVT01018204001 assembled CDS 125 2e-29
GSVIVT01017678001 assembled CDS 125 3e-29
GSVIVT01028208001 assembled CDS 124 5e-29
GSVIVT01013452001 assembled CDS 122 1e-28
GSVIVT01003836001 assembled CDS 122 2e-28
GSVIVT01033064001 assembled CDS 122 2e-28
GSVIVT01021087001 assembled CDS 120 9e-28
GSVIVT01014302001 assembled CDS 119 1e-27
GSVIVT01020578001 assembled CDS 117 5e-27
GSVIVT01017835001 assembled CDS 97 1e-20
GSVIVT01020050001 assembled CDS 54 9e-08
GSVIVT01020051001 assembled CDS 51 7e-07
>GSVIVT01012247001 assembled CDS
Length = 498
Score = 203 bits (516), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 137/230 (59%), Gaps = 6/230 (2%)
Query: 42 FGNNMVISSQQAIENQNFGHLSYQEMMGKQLPDNSIRVSLSSEV---DVGKIINPFIVNN 98
F N+ ++ + A+E+ F L +++ K LP N LS E+ +I++P +
Sbjct: 17 FENDGLVLDRDAVESMEFMELDSPDLVRKLLPSNPSVGFLSGEIGRNSSKRIVSPTNMVT 76
Query: 99 TNSFXXXXXXXXXXXXXXXXXXXXXXXXFIDLKLGRFGDPTTDAQNSRTXXXXXXXXXXX 158
+N IDLKLGR D DA+N+R
Sbjct: 77 SNPIFGGEESSSRLSSSFMESNSQDSS-IIDLKLGRLAD-CIDAKNNRCSKEGSVLSSLA 134
Query: 159 XXNPPKRMRP-GVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRF 217
P KR R V S T CQV+GCN DLSSSK+YHKRHKVC+VHSKT KVIVNGIEQRF
Sbjct: 135 SSMPAKRARTTSVCSQTPLCQVHGCNMDLSSSKDYHKRHKVCDVHSKTPKVIVNGIEQRF 194
Query: 218 CQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGLHAGRTGRLIQSY 267
CQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ+ H+G+ +L+QSY
Sbjct: 195 CQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQLDTHSGKPQKLLQSY 244
>GSVIVT01008556001 assembled CDS
Length = 377
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 88/141 (62%), Gaps = 2/141 (1%)
Query: 128 IDLKLGRFGDPTTDAQNSRTXXXXXXXXXXXXXNPPKRMRPGVN-SHTAYCQVYGCNKDL 186
IDLKLG+ +P++D + KR R N S T C V GCN DL
Sbjct: 43 IDLKLGQVSNPSSDFADKLKEQKFSSIAAPLPSGSSKRARATNNGSQTVSCLVDGCNSDL 102
Query: 187 SSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNE 246
S+ +EYH+RHKVCE+HSKTA+V + G QRFCQQCSRFH L EFD+GKRSCRKRL GHN
Sbjct: 103 SNCREYHRRHKVCELHSKTAQVTIGGHTQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNR 162
Query: 247 RRRKPQVGLHAGRTGRLIQSY 267
RRRKPQ R G + +Y
Sbjct: 163 RRRKPQPE-PLSRPGSFLTNY 182
>GSVIVT01010522001 assembled CDS
Length = 421
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Query: 127 FIDLKLGRFGDPTTDAQNSRTXXXXXXXXXXXXXNPPKRMR-PGVNSHTAYCQVYGCNKD 185
+DLKLGR D + NS KR R PG + C V GC D
Sbjct: 44 LVDLKLGRLSDLGDGSVNSFKSSMMESSSSGSA----KRARTPGHGTQVVSCLVDGCKSD 99
Query: 186 LSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHN 245
LS ++YH+RHKVCE+HSKTAKV + G EQRFCQQCSRFH L EFD+GKRSCRKRL GHN
Sbjct: 100 LSKCRDYHRRHKVCELHSKTAKVTIGGHEQRFCQQCSRFHSLGEFDEGKRSCRKRLDGHN 159
Query: 246 ERRRKPQVGLHAGRTGRLIQSYNA 269
RRRKPQ + +GR + S+
Sbjct: 160 RRRRKPQPEPLSITSGRFLSSHQG 183
>GSVIVT01033519001 assembled CDS
Length = 349
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Query: 177 CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 236
CQV GC DLS +K Y+ RHKVC +HSK+ VIV G+EQRFCQQCSRFH LAEFD GKRS
Sbjct: 52 CQVEGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCSRFHQLAEFDQGKRS 111
Query: 237 CRKRLAGHNERRRKPQVG-LHAGRTGRLIQS 266
CR+RLAGHNERRRKP G L + R GRL S
Sbjct: 112 CRRRLAGHNERRRKPPPGSLLSSRYGRLSSS 142
>GSVIVT01010496001 assembled CDS
Length = 418
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 70/82 (85%)
Query: 171 NSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEF 230
N+H + CQV GCN DLS++K+YH++H+VCE H+K KVIV G+E+RFCQQCSRFH L+EF
Sbjct: 122 NAHVSRCQVEGCNLDLSTAKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEF 181
Query: 231 DDGKRSCRKRLAGHNERRRKPQ 252
D+ KRSCR+RL+ HN RRRKPQ
Sbjct: 182 DEKKRSCRRRLSDHNARRRKPQ 203
>GSVIVT01032239001 assembled CDS
Length = 326
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 164 KRMRPGV-NSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCS 222
KR R +S T CQV GCN DL S+K+YH+RH++CE HSK+ KVIV G+E+RFCQQCS
Sbjct: 38 KRFRTSYQSSQTPRCQVEGCNLDLKSAKDYHRRHRICENHSKSPKVIVAGLERRFCQQCS 97
Query: 223 RFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGLHAGRTGRLIQS 266
RFH L EFDD KRSCR+RL HN RRR+P +GRL S
Sbjct: 98 RFHELTEFDDKKRSCRRRLNDHNARRRRPHPESIQFSSGRLPSS 141
>GSVIVT01018205001 assembled CDS
Length = 404
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 65/74 (87%)
Query: 177 CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 236
CQV GC+ L ++K+YH+RHKVCE+HSK KV+V G+EQRFCQQCSRFH ++EFDD KRS
Sbjct: 162 CQVEGCHVALVNAKDYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHAVSEFDDSKRS 221
Query: 237 CRKRLAGHNERRRK 250
CR+RLAGHNERRRK
Sbjct: 222 CRRRLAGHNERRRK 235
>GSVIVT01018204001 assembled CDS
Length = 388
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 168 PGVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLL 227
PG+ +++ CQ GCN DL+ +K YH+RHKVCE HSK + V G+ QRFCQQCSRFHLL
Sbjct: 229 PGL-TNSPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVFAAGLTQRFCQQCSRFHLL 287
Query: 228 AEFDDGKRSCRKRLAGHNERRRKPQ 252
+EFD+GKRSCRKRLA HN RRRK Q
Sbjct: 288 SEFDNGKRSCRKRLADHNRRRRKSQ 312
>GSVIVT01017678001 assembled CDS
Length = 980
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 65/82 (79%)
Query: 169 GVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLA 228
G + A CQV C DL ++K+YH+RHKVC++HSK +K +V + QRFCQQCSRFHLL
Sbjct: 117 GATPNRAVCQVEDCRADLGNAKDYHRRHKVCDMHSKASKALVGNVMQRFCQQCSRFHLLQ 176
Query: 229 EFDDGKRSCRKRLAGHNERRRK 250
EFD+GKRSCR+RLAGHN RRRK
Sbjct: 177 EFDEGKRSCRRRLAGHNRRRRK 198
>GSVIVT01028208001 assembled CDS
Length = 860
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 55/82 (67%), Positives = 65/82 (79%)
Query: 169 GVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLA 228
GV+S A CQV C DLS +K+YH+RHKVCE+HSK +V QRFCQQCSRFH+L
Sbjct: 123 GVSSSRAVCQVEDCGADLSKAKDYHRRHKVCEMHSKAGCALVGNDMQRFCQQCSRFHVLQ 182
Query: 229 EFDDGKRSCRKRLAGHNERRRK 250
EFD+GKRSCR+RLAGHN+RRRK
Sbjct: 183 EFDEGKRSCRRRLAGHNKRRRK 204
>GSVIVT01013452001 assembled CDS
Length = 921
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
Query: 162 PPKRMRPGVNSHTA--YCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQ 219
P KR+R G ++ CQV C +DLS++K+YH+RHKVCE+HSK+ K +V QRFCQ
Sbjct: 105 PSKRVRSGSPGSSSYPMCQVDNCREDLSNAKDYHRRHKVCEMHSKSTKALVGKQMQRFCQ 164
Query: 220 QCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 252
QCSRFH L+EFD+GKRSCR+RLAGHN RRRK Q
Sbjct: 165 QCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQ 197
>GSVIVT01003836001 assembled CDS
Length = 207
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 67/86 (77%)
Query: 167 RPGVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHL 226
R GV S+T CQ C DL ++K YH+RHKVCE H+K A V + GIEQRFCQQCSRFH
Sbjct: 75 RRGVPSNTLCCQADDCGVDLRAAKRYHRRHKVCERHAKAAFVFLGGIEQRFCQQCSRFHE 134
Query: 227 LAEFDDGKRSCRKRLAGHNERRRKPQ 252
+++FDD KRSCRKRLAGHN+RRRK Q
Sbjct: 135 ISQFDDTKRSCRKRLAGHNQRRRKNQ 160
>GSVIVT01033064001 assembled CDS
Length = 378
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 78/129 (60%), Gaps = 10/129 (7%)
Query: 128 IDLKLGRFGD----PTTDAQNSRTXXXXXXXXXXXXXNPPKRMRPGVNSHTAYCQVYGCN 183
+DLKLGR GD T ++S++ +R R + C V GC
Sbjct: 43 VDLKLGRLGDLGDGSTDKFKDSKSLRVSSPSGSS------RRARALNGTQNVSCLVDGCT 96
Query: 184 KDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAG 243
DL + +EYH+RH+VCE HSKT VI+ G E+RFCQQCSRFH L EFD+ KRSCRKRL G
Sbjct: 97 SDLRNCREYHRRHRVCERHSKTPVVIIGGQEKRFCQQCSRFHSLGEFDEVKRSCRKRLDG 156
Query: 244 HNERRRKPQ 252
HN RRRK Q
Sbjct: 157 HNRRRRKTQ 165
>GSVIVT01021087001 assembled CDS
Length = 140
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%)
Query: 169 GVNSHTAYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLA 228
G S CQV C D+S +K YHKRH+VCE H+K +++ GI+QRFCQQCSRFH L+
Sbjct: 48 GAGSTPPSCQVDNCTADMSEAKRYHKRHRVCEHHAKAPVILIAGIQQRFCQQCSRFHELS 107
Query: 229 EFDDGKRSCRKRLAGHNERRRK 250
EFDD KRSCR+RLAGHNERRRK
Sbjct: 108 EFDDTKRSCRRRLAGHNERRRK 129
>GSVIVT01014302001 assembled CDS
Length = 204
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 60/74 (81%)
Query: 177 CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 236
CQ C DL+ +K YH+RHKVCEVH+K A V V G+ QRFCQQCSRFH L+EFD+ KRS
Sbjct: 84 CQAEKCGADLTDAKRYHRRHKVCEVHAKAAMVEVAGLRQRFCQQCSRFHELSEFDEAKRS 143
Query: 237 CRKRLAGHNERRRK 250
CR+RLAGHNERRRK
Sbjct: 144 CRRRLAGHNERRRK 157
>GSVIVT01020578001 assembled CDS
Length = 169
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 60/74 (81%)
Query: 177 CQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRS 236
CQ C DL+ +K+YH+RHKVCE H+K V+V GI QRFCQQCSRFH L+EFD+ KRS
Sbjct: 50 CQAERCTADLTDAKQYHRRHKVCEHHAKAQVVVVGGIRQRFCQQCSRFHELSEFDEAKRS 109
Query: 237 CRKRLAGHNERRRK 250
CR+RLAGHNERRRK
Sbjct: 110 CRRRLAGHNERRRK 123
>GSVIVT01017835001 assembled CDS
Length = 692
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%)
Query: 175 AYCQVYGCNKDLSSSKEYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGK 234
A CQV GC D+S K YH+RH+VC + + VI++G +R+CQQC +FH+L++FD+GK
Sbjct: 23 ARCQVTGCEADISELKGYHRRHRVCLRCANASVVILDGQNKRYCQQCGKFHILSDFDEGK 82
Query: 235 RSCRKRLAGHNERRRKPQV 253
RSCR++L HN RRR+ +
Sbjct: 83 RSCRRKLERHNNRRRRKPI 101
>GSVIVT01020050001 assembled CDS
Length = 116
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%), Gaps = 2/34 (5%)
Query: 223 RFHLLAEFDDGKRSCRKRLAGHNERRRK--PQVG 254
RFH+L EFD+GKRSC++RLAGHN+RRRK P V
Sbjct: 25 RFHVLQEFDEGKRSCQRRLAGHNKRRRKTHPDVA 58
>GSVIVT01020051001 assembled CDS
Length = 115
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 26/27 (96%)
Query: 223 RFHLLAEFDDGKRSCRKRLAGHNERRR 249
RFH+L EFD+GKRSC++RLAGHN+RR+
Sbjct: 25 RFHVLQEFDEGKRSCQRRLAGHNKRRK 51