Jatropha Genome Database

JcCB0133611.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0133611.20 + phase: 2 /partial
         (174 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01029054001 assembled CDS                                       305   7e-84
GSVIVT01018047001 assembled CDS                                        63   7e-11
GSVIVT01021809001 assembled CDS                                        62   1e-10
GSVIVT01027822001 assembled CDS                                        61   3e-10
GSVIVT01021816001 assembled CDS                                        58   3e-09
GSVIVT01021808001 assembled CDS                                        58   3e-09
GSVIVT01021812001 assembled CDS                                        57   6e-09
GSVIVT01021818001 assembled CDS                                        56   7e-09
GSVIVT01021820001 assembled CDS                                        56   9e-09
GSVIVT01021822001 assembled CDS                                        54   4e-08
GSVIVT01031646001 assembled CDS                                        53   6e-08
GSVIVT01031651001 assembled CDS                                        52   1e-07
GSVIVT01031649001 assembled CDS                                        51   2e-07
GSVIVT01038618001 assembled CDS                                        48   2e-06

>GSVIVT01029054001 assembled CDS
          Length = 192

 Score =  305 bits (781), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 145/157 (92%), Positives = 153/157 (97%)

Query: 14  MNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNLLSRHKVESEYLPL 73
           MNYVID GWAFYWGTSEWSAQQITEAWG+AERLDLVGPIVEQPEYNLLSRHKVE EYLPL
Sbjct: 1   MNYVIDHGWAFYWGTSEWSAQQITEAWGVAERLDLVGPIVEQPEYNLLSRHKVECEYLPL 60

Query: 74  YTNYGLGLTTWSPLASGVLTGKYSKGAIPPDSRFALENYKNLASRSLVDDVLKKVNGLKP 133
           Y+NYG+GLTTWSPLASGVLTGKY+KG IP DSRFALENYKNLASRSLVDDVL+KVNGLKP
Sbjct: 61  YSNYGIGLTTWSPLASGVLTGKYNKGTIPQDSRFALENYKNLASRSLVDDVLRKVNGLKP 120

Query: 134 IADELGVPLSQLAIAWCAANPNVSSVITGATRESQVK 170
           IADELGVPLSQLAIAWCAANPNVSSVITGAT+ESQ++
Sbjct: 121 IADELGVPLSQLAIAWCAANPNVSSVITGATKESQIQ 157


>GSVIVT01018047001 assembled CDS
          Length = 345

 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 18/168 (10%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D S PIE+T+  +  ++++G   Y G SE S   I  A         V PI   Q EY+ 
Sbjct: 137 DMSVPIEDTMEELKKLVEEGKIKYIGLSEASVDTIRRAHA-------VHPITALQMEYSF 189

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTGKYSKGAIPPDSRFALE---NYKNLAS 117
            +R ++E + +PL    G+G+  +SPL  G   GK    ++P  S   +      +NL  
Sbjct: 190 WAR-EIEEDIIPLCRELGIGIVAYSPLGRGFFGGKAVVESLPTQSILTMHPRFTGENLEK 248

Query: 118 RSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATR 165
             L+   L+K      +A + G  L QLA+AW     +    I G T+
Sbjct: 249 NKLIYARLEK------LAAKHGCTLPQLALAWLFHQGDDVVPIPGTTK 290


>GSVIVT01021809001 assembled CDS
          Length = 343

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 24/171 (14%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D S PIEET+  +  ++++G   Y G SE S   I  A         V PI   Q E++L
Sbjct: 134 DRSVPIEETMGELKKLVEEGKIKYIGLSEASPDTIRRAHA-------VHPITALQMEWSL 186

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTGKYSKGAIPPDS------RFALENYKN 114
            +R ++E E +PL    G+G+  +SPL  G   GK     +P +S      RF  EN++ 
Sbjct: 187 WTR-EIEEEIVPLCRELGIGIVPYSPLGRGFFGGKAVSENVPANSLLRSNPRFQGENFEK 245

Query: 115 LASRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATR 165
                  + ++     ++ +A++ G   +QLA+AW     +  + I G T+
Sbjct: 246 -------NKII--YTKMEMLAEKHGCTAAQLALAWVLRQGDDVAPIPGTTK 287


>GSVIVT01027822001 assembled CDS
          Length = 418

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 8/172 (4%)

Query: 4   STPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVEQPEYNLLSR 63
           S P  E ++A   +ID+G   Y G S  ++  + E    A+   L   +  Q  Y+LL R
Sbjct: 216 SIPFVEQLKAFQELIDEGKVRYIGVSNETSYGVMEFVHAAKVEGLPKIVSIQNSYSLLVR 275

Query: 64  HKVESEYLPLY--TNYGLGLTTWSPLASGVLTGKYSKGAIPPDSRFALE---NYKNLASR 118
            + E + + +    NY +GL  +SPL  G L+GKY         R  L     Y    +R
Sbjct: 276 CRFEIDLVEVCHPNNYNIGLLAYSPLGGGSLSGKYLDINSEAAKRGRLNLFPGYMERYNR 335

Query: 119 SLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATRESQVK 170
           S+  +   +      +A + G+ L QLA+ +    P ++S I GAT   Q+K
Sbjct: 336 SIAKEATIEYT---KVAKKHGLTLVQLALGFARDRPFMASSIVGATSVDQLK 384


>GSVIVT01021816001 assembled CDS
          Length = 381

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 24/171 (14%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D+S PIEET+  +  ++++G   Y G  E S+  I  A         V PI   + E++L
Sbjct: 167 DTSIPIEETMGELKKLVEEGKIKYIGLCEASSDTIRRAHA-------VHPITAIEMEWSL 219

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTGKYSKGAIPPDS------RFALENYKN 114
            +R ++E E LPL    G+G+  +SPL  G   GK +   +P +S      RF  EN++ 
Sbjct: 220 WTR-EIEEEILPLCRELGIGIVPYSPLGRGFFGGKAAGENLPANSFLRSNPRFQGENFEK 278

Query: 115 LASRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATR 165
                   ++L + +   P         +QLA+AW     +    I G T+
Sbjct: 279 NKLLYAKIEMLAEKHRCTP---------AQLALAWLFHQGDYVVPIPGTTK 320


>GSVIVT01021808001 assembled CDS
          Length = 346

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 24/171 (14%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D+S PIEET+  +  ++++G   Y G  E S+  I  A         V PI   + E++L
Sbjct: 132 DTSIPIEETMGELKKLVEEGKIKYIGLCEASSDTIRRAHA-------VHPITAIEMEWSL 184

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTGKYSKGAIPPDS------RFALENYKN 114
            +R ++E E LPL    G+G+  +SPL  G   GK +   +P +S      RF  EN++ 
Sbjct: 185 WTR-EIEEEILPLCRELGIGIVPYSPLGRGFFGGKAAGENLPANSFLRSNPRFQGENFEK 243

Query: 115 LASRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATR 165
                   ++L + +   P         +QLA+AW     +    I G T+
Sbjct: 244 NKLLYAKIEMLAEKHRCTP---------AQLALAWLFHQGDYVVPIPGTTK 285


>GSVIVT01021812001 assembled CDS
          Length = 347

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 30/174 (17%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D S PIEET+  +  ++ +G   Y G SE S   I  A         V PI   Q E++L
Sbjct: 139 DKSVPIEETMEELKKLVAEGKIKYIGLSEPSPDTIRRAHA-------VHPITALQMEWSL 191

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTGKYSKGAIPPDS------RFALENY-- 112
            +R  +E E +PL    G+G+  +SPL  G   GK      P ++      RF  EN+  
Sbjct: 192 WTR-DIEEEIVPLCRELGIGIVPYSPLGRGFFGGKVVDENAPANTFLRLNPRFQGENFEK 250

Query: 113 -KNLASRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATR 165
            KN+ ++            ++ +A++     +QLA+AW     +  + I G T+
Sbjct: 251 NKNIYTK------------MEMLAEKHRCTPAQLALAWVLHQGDDVAPIPGTTK 292


>GSVIVT01021818001 assembled CDS
          Length = 342

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 30/174 (17%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D S PIEET+  +  ++ +G   Y G SE S   I  A         V PI   Q E++L
Sbjct: 134 DKSVPIEETMEELKKLVAEGKIKYIGLSEPSPDTIRRAHA-------VHPITALQMEWSL 186

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTGKYSKGAIPPDS------RFALENY-- 112
            +R  +E E +PL    G+G+  +SPL  G   GK      P ++      RF  EN+  
Sbjct: 187 WTR-DIEEEIVPLCRELGIGIVPYSPLGRGFFGGKVVDENAPANTFLRLNPRFQGENFEK 245

Query: 113 -KNLASRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATR 165
            KN+ ++            ++ +A++     +QLA+AW     +  + I G T+
Sbjct: 246 NKNIYTK------------MEMLAEKHRCTPAQLALAWVLHQGDDVAPIPGTTK 287


>GSVIVT01021820001 assembled CDS
          Length = 342

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 24/171 (14%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D S PIEET+  +  ++++    Y G SE S   I  A+        V P+   Q E++L
Sbjct: 134 DKSVPIEETMGELKKLVEEEKIKYIGLSEASPDTIRRAYA-------VHPVTALQMEWSL 186

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTGKYSKGAIPPDS------RFALENYKN 114
            +R  +E E +PL    G+G+  +SPL  G   GK     +P +S      RF  EN++ 
Sbjct: 187 WTRD-IEEEIVPLCRELGIGIVPYSPLGRGFFGGKAVDENVPANSFLRSIPRFQGENFEK 245

Query: 115 LASRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATR 165
                  + ++     ++ +A++     +QLA+AW     +  + I G T+
Sbjct: 246 -------NKII--YTKMEMLAEKYRCTPAQLALAWVLCRGDNVAPIPGTTK 287


>GSVIVT01021822001 assembled CDS
          Length = 339

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 28/172 (16%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D+S PIE+TV  +  ++++G   Y G SE S   I  A         V PI   Q E++L
Sbjct: 128 DTSVPIEDTVGELKKLVEEGKIKYIGLSEASPDTIRRAHA-------VHPITALQMEWSL 180

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTGKYSKGAIPP----DSRFALENY---K 113
            SR  +E E +PL    G+G+  + PL  G   G+    ++P       RF  EN    K
Sbjct: 181 WSR-DIEDEIIPLCRELGIGIVPYCPLGRGFFGGRGVVESLPAYLALHPRFRRENLEKNK 239

Query: 114 NLASRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATR 165
           NL +R            ++ +A++ G   +QLA+AW     +    I G T+
Sbjct: 240 NLYTR------------IENLANKHGCTPAQLALAWVLQQGDDVVPIPGTTK 279


>GSVIVT01031646001 assembled CDS
          Length = 318

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 19/169 (11%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D+  PIE TV  +  ++++G   Y G SE SA  I  A         V PI   Q E++L
Sbjct: 107 DTRVPIEVTVGELKKLVEEGKIKYIGLSEASASTIRRAHA-------VHPITAVQLEWSL 159

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLT--GKYSKGAIPPDSRFALENYK--NLA 116
            SR  VE + +P     G+G+  +SPL  G L+   K  +     DSR     ++  NL 
Sbjct: 160 WSR-DVEEDIVPTCRELGIGIVAYSPLGRGFLSSGAKMVENLSDNDSRKYFPRFQPENLE 218

Query: 117 SRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATR 165
              ++ + + +      IA   G   SQLA+AW     +    I G T+
Sbjct: 219 HNKILYERVSE------IATRKGCTPSQLALAWVHHQGDDVCPIPGTTK 261


>GSVIVT01031651001 assembled CDS
          Length = 316

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D+  PIE T+  +  ++++G   Y G SE SA  I  A         V PI   Q E++L
Sbjct: 105 DTRLPIEVTMGELKKLVEEGKIKYIGLSEASASTIRRAHA-------VHPITAVQLEWSL 157

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLT--GKYSKGAIPPDSRFALENYK--NLA 116
            +R   E + +P     G+G+  +SPL  G L+   K ++     D R  L  ++  N+ 
Sbjct: 158 WAR-DAEEDIIPTCRELGIGIVAYSPLGRGFLSLGAKVAENLSNDDYRKTLPRFQPENIE 216

Query: 117 SRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATR 165
             +++ + +K+      IA   G   SQLA+AW     +    I G T+
Sbjct: 217 HNNILFERVKE------IATRKGCTTSQLALAWVHHQGDDVCPIPGTTK 259


>GSVIVT01031649001 assembled CDS
          Length = 316

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 19/174 (10%)

Query: 2   DSSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPIVE-QPEYNL 60
           D+  PIE T+  +  ++++G   Y G SE SA  I        R   V PI   Q E++L
Sbjct: 105 DTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTI-------RRAHAVHPITAVQLEWSL 157

Query: 61  LSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTG--KYSKGAIPPDSRFALENYK--NLA 116
            +R  VE E +P     G+G+  +SPL  G  +   K  +     D R  L  ++  NL 
Sbjct: 158 WTR-DVEEEIVPTCRELGIGIVAYSPLGRGFFSSGTKLIENLSNNDFRKNLPRFQPENLG 216

Query: 117 SRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATRESQVK 170
              ++ + + +      IA   G   SQLA+AW     +    I G T+   +K
Sbjct: 217 HNKILYERVSE------IATRKGCTPSQLALAWVHHQGDDVCPIPGTTKIENLK 264


>GSVIVT01038618001 assembled CDS
          Length = 330

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)

Query: 19  DKGWAFYWGTSEWSAQQITEAWGIAERLDLVG-PIVE-QPEYNLLSRHKVESEYLPLYTN 76
           +KG     G S +  +Q+ +   I + L   G P+   Q +++LLS+ + + E   +  +
Sbjct: 142 EKGLVRAVGVSNYGPKQLVK---IHDYLKARGVPLCSAQVQFSLLSKGEDQIEIKNICGS 198

Query: 77  YGLGLTTWSPLASGVLTGKYSKGAIPPDSRFALENYKNLASRSLVDDVLKKVNGLKPIAD 136
            G+ L ++SPL  G+LTGKY+   +P   R        L  R ++  +   +N L+ IA 
Sbjct: 199 LGIRLISYSPLGLGMLTGKYTPSKLPRGPR-------ALLFRQILPGLEPLLNSLREIAQ 251

Query: 137 ELGVPLSQLAIAWCAANPNV 156
           +    + Q+AI WC     +
Sbjct: 252 KRRKTIPQVAINWCICQGTI 271