Jatropha Genome Database
- JcCB0129341.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0129341.10 - phase: 0
(727 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01032251001 assembled CDS 683 0.0
GSVIVT01015035001 assembled CDS 207 1e-53
GSVIVT01009865001 assembled CDS 151 1e-36
GSVIVT01021552001 assembled CDS 135 6e-32
GSVIVT01020805001 assembled CDS 133 3e-31
GSVIVT01035205001 assembled CDS 127 2e-29
GSVIVT01025159001 assembled CDS 91 2e-18
GSVIVT01008639001 assembled CDS 89 5e-18
GSVIVT01019566001 assembled CDS 88 2e-17
GSVIVT01027166001 assembled CDS 86 9e-17
GSVIVT01037136001 assembled CDS 84 2e-16
GSVIVT01023149001 assembled CDS 83 6e-16
GSVIVT01004942001 assembled CDS 81 2e-15
GSVIVT01011008001 assembled CDS 69 1e-11
GSVIVT01016972001 assembled CDS 56 6e-08
GSVIVT01029497001 assembled CDS 52 1e-06
GSVIVT01015573001 assembled CDS 50 3e-06
>GSVIVT01032251001 assembled CDS
Length = 1034
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/734 (53%), Positives = 446/734 (60%), Gaps = 109/734 (14%)
Query: 1 MPWLGDDMYMKDPHSLPGLSLVQWMNMQQNPSLANSLQPNYMQSLSGSV--LQNLPGADL 58
MPWLGDD+ MKDP ++ GLSLVQWMNMQQNP L NS QPNYM SLSGS+ L LP
Sbjct: 403 MPWLGDDICMKDPQAVHGLSLVQWMNMQQNPPLGNSAQPNYMHSLSGSLDQLTKLP---- 458
Query: 59 SRQLGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLNPLGSIIQSQHQLGDITQQ 118
++LNPLGS+IQ Q QL DI QQ
Sbjct: 459 --------------------------------------ATLNPLGSVIQPQQQLNDIAQQ 480
Query: 119 PRQNLVTQTIPSSQVQPQNLQPQTLAQNTNIXXXXXXXXXXXXXRNISXXXXXXXXXXXX 178
PR QNL QTL + NI
Sbjct: 481 PR---------------QNLMNQTLPSSQVQAQLLQQPQALVQNHNI------------- 512
Query: 179 XXXXXXXXXXXXXXXXXXXVTQHLQMPDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 238
Q LQM DN
Sbjct: 513 ---------LQQQPSPPDQANQQLQMSDNQIQLQLLQKLQQQQQSLLAQQSTMQQTAQLT 563
Query: 239 XXXDPQRQFLEASKSFARSMPANQLLEMPQTTPASLPQSNIIQQQMTKNGNQTNARLSHM 298
DPQRQ L+ S++F+RS+ + Q+LEMPQ T SLPQS +I QQ+TK+ +QTN R SH
Sbjct: 564 QLQDPQRQLLDVSQNFSRSVASGQILEMPQATSTSLPQSLVIPQQITKSNSQTNVRFSHP 623
Query: 299 PXXXXXXXXXPGTLSEMPGHMGLTTSSVVNHSVANHLSIAGNIILTSAAGAGLSGITEEV 358
P PG L E+PGH+ L + N LS AG+ +LT AAGAG SGIT++V
Sbjct: 624 PQQPKLQQQQPGMLPELPGHVVLPP-----MTATNQLSTAGSSLLTGAAGAGQSGITDDV 678
Query: 359 PSCSTSPSTNNCANLVQP-MNSRVHQNTVLGDDAAQSAATLLSPNALETMSCSANLVKDL 417
PSCSTSPSTNNC N++QP +N R H+ T + ++ AQS+ATLLS + LET+S +ANLVKD
Sbjct: 679 PSCSTSPSTNNCPNVIQPILNGRAHRTTAM-EEMAQSSATLLSGSGLETISANANLVKDF 737
Query: 418 QQKSDVKPSLNIAKNQSQGFFPPQTYLNGATAQADYLDXXXXXXXVCVSQNDVHLXXXXX 477
QQK D+KPSLNI+K+ +QGFF PQTY+N A Q DYLD VC+SQND
Sbjct: 738 QQKPDIKPSLNISKSHNQGFFAPQTYVNVAAVQTDYLDTSSSATSVCLSQNDHLQQNNNP 797
Query: 478 XXXXXXXMLLRDTSQDGELQADIRNSVPYGTNVESQLGVPMNSDNVLSEGVIGLGKDLPN 537
M+ RDTSQD E QAD RN+V +GTN++SQLG+PM D +LS+G++G GK+ N
Sbjct: 798 LSFNQPSMMFRDTSQDREAQADPRNNVQFGTNIDSQLGIPMLPDPILSKGMVGSGKEFSN 857
Query: 538 NLSSGCMLANCENSKDA----PSSMVSQSFGVPDMAFNSIDSTINDSSFLNRGPWAPPPQ 593
NLSSG +LAN EN KDA SS+VSQSFGVPDMAFNSIDS INDSSFLNRGPWAP PQ
Sbjct: 858 NLSSGGLLANYENPKDAQQDLSSSIVSQSFGVPDMAFNSIDSAINDSSFLNRGPWAPAPQ 917
Query: 594 FQRMRTYTKVYCFGLLNAICTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEG 653
FQRMRTYTKVY KRGAVGRSIDITRYS YDELKQDLARRFGIEG
Sbjct: 918 FQRMRTYTKVY-----------------KRGAVGRSIDITRYSGYDELKQDLARRFGIEG 960
Query: 654 QLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSV 713
QLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGD GNSV
Sbjct: 961 QLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDIGNSV 1020
Query: 714 FPNQACSSSDNGNV 727
NQACSSSD GN
Sbjct: 1021 LQNQACSSSDGGNA 1034
>GSVIVT01015035001 assembled CDS
Length = 878
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 123/175 (70%), Gaps = 22/175 (12%)
Query: 556 SSMVSQSFGVPDMAFN---SIDSTINDSSFLNRGPWAPPPQFQRMRTYTKVYCFGLLNAI 612
+++ SQSFGVP+M+F S D I ++ L+ G W Q QRMRTYTKV
Sbjct: 708 AAISSQSFGVPNMSFKPGCSNDVAITETGVLSNGLWTN--QAQRMRTYTKVQ-------- 757
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
KRG+VGRSID+TRY YDEL+ DLAR FGIEGQLED QR WKLVYVDHEN
Sbjct: 758 ---------KRGSVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEN 808
Query: 673 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFPNQACSSSDNGNV 727
D+LLVGDDPWEEFV+CV+ IKILS EVQQMSLDGD G+ PNQACS +D+GN
Sbjct: 809 DILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGHVPVPNQACSGTDSGNA 863
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 1 MPWLGDDMYMKDPHS--LPGLSLVQWMNMQQNPSLANSLQPNYMQSLSGSVLQ-NLPGAD 57
MPWLGDD MKD S PGL+LVQWM+MQQN S + +S +VL NL D
Sbjct: 394 MPWLGDDFGMKDAPSSIFPGLNLVQWMSMQQNNQFPASQSGLFPPMVSSTVLHSNLSTDD 453
Query: 58 LSRQLGL 64
S+ L
Sbjct: 454 PSKLLSF 460
>GSVIVT01009865001 assembled CDS
Length = 907
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 114/205 (55%), Gaps = 37/205 (18%)
Query: 517 PMNSDNVLSEGVIGLGKDLPNNLSSGCMLANCENSKDAPSSMVS------QSFGVPDMAF 570
P S +L E D P+ S C++ N S+D S + S Q+F PD
Sbjct: 708 PSVSSTILDEFCTFKDADFPD--PSDCLVGNFSTSQDVQSQITSVSLADSQAFSRPDFLD 765
Query: 571 NSIDST-----INDSSFLNRGPW---APPPQFQRMRTYTKVYCFGLLNAICTLASMQVYK 622
NS ++ ++SS L W APPP MRTYTKV K
Sbjct: 766 NSGGTSSSNVDFDESSLLQNSSWQQVAPPP----MRTYTKVQ-----------------K 804
Query: 623 RGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPW 682
G+VGRSID+ + +Y+EL + FG+EG L D++ GWKLVYVD+ENDVLLVGDDPW
Sbjct: 805 MGSVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYENDVLLVGDDPW 864
Query: 683 EEFVNCVRCIKILSPQEVQQMSLDG 707
+EFV CVRCI+ILSP EVQQMS +G
Sbjct: 865 KEFVGCVRCIRILSPSEVQQMSEEG 889
>GSVIVT01021552001 assembled CDS
Length = 160
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 84/110 (76%), Gaps = 2/110 (1%)
Query: 614 TLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 673
T ++VYK G+ GRS+DIT++S Y EL+ +LAR FG+EGQLED +R GW+LV+VD END
Sbjct: 26 TRTFVKVYKSGSFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREND 85
Query: 674 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG-DFGNSVFPNQACSSS 722
VLL+GDDPW EFVN V CIKILS QEVQQM G + NSV P Q +SS
Sbjct: 86 VLLLGDDPWPEFVNSVWCIKILSLQEVQQMGKRGLELLNSV-PIQRLTSS 134
>GSVIVT01020805001 assembled CDS
Length = 836
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 82/111 (73%)
Query: 614 TLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 673
T ++V+K G+ GRS+DIT++S YDEL+ +L R FG+EG+LED R GW+LV+VD END
Sbjct: 679 TRTFVKVHKLGSFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDREND 738
Query: 674 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVFPNQACSSSDN 724
VLL+GDDPW+EFVN V IKILSP EVQQM +G + P+ S+S N
Sbjct: 739 VLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKEGINVPNPIPSHRISNSGN 789
>GSVIVT01035205001 assembled CDS
Length = 163
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 74/90 (82%)
Query: 618 MQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
++VYK G+VGRS+DITR+S Y EL+++L + FGIEG+LE+ R GW+LV+VD ENDVLL+
Sbjct: 39 VKVYKSGSVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDRENDVLLL 98
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSLDG 707
GDDPWE FVN V IKILSP++VQ+M G
Sbjct: 99 GDDPWEAFVNNVWYIKILSPEDVQKMGKQG 128
>GSVIVT01025159001 assembled CDS
Length = 798
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
Query: 619 QVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 677
+V+K+G VGR+ID++R + Y +L +L R FG+EG L D + GW+++Y D END+++V
Sbjct: 674 KVHKQGNLVGRAIDLSRLNGYGDLFSELERLFGMEGLLRDPDK-GWQILYTDSENDMMVV 732
Query: 678 GDDPWEEFVNCVRCIKILSPQEVQQMSL 705
GDDPW EF N V I I + +EV++M++
Sbjct: 733 GDDPWHEFCNVVSKIHIYTQEEVEKMTI 760
>GSVIVT01008639001 assembled CDS
Length = 862
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 607 GLLNAICTLASMQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKL 665
G + ++ T + +V+K+G A+GRS+D+T++++YDEL +L + F G+L ++ W +
Sbjct: 728 GKVQSVSTRSCTKVHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGELMAPKK-NWLI 786
Query: 666 VYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQM 703
VY D E D++LVGDDPW+EF VR I I + +EVQ+M
Sbjct: 787 VYTDDEGDMMLVGDDPWQEFCGMVRKIYIYTREEVQRM 824
>GSVIVT01019566001 assembled CDS
Length = 682
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 625 AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEE 684
AVGR++D+T YDEL +L F I+G+L R R W++V+ D E D++LVGDDPW E
Sbjct: 581 AVGRAVDLTALEGYDELIDELEEMFEIKGEL--RPRYKWEIVFTDDEGDMMLVGDDPWPE 638
Query: 685 FVNCVRCIKILSPQEVQQMS 704
F N VR I I S Q+V++MS
Sbjct: 639 FCNMVRRIFICSSQDVKKMS 658
>GSVIVT01027166001 assembled CDS
Length = 607
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 625 AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEE 684
AVGR++D+T YDEL +L + F I+G+L R + W++V+ D E D++LVGDDPW+E
Sbjct: 503 AVGRAVDLTALEGYDELISELEKMFEIKGELCPRNK--WEVVFTDDEGDMMLVGDDPWQE 560
Query: 685 FVNCVRCIKILSPQEVQQMS 704
F VR I I S +EV++MS
Sbjct: 561 FCKMVRKIFIYSSEEVKKMS 580
>GSVIVT01037136001 assembled CDS
Length = 643
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 71/114 (62%), Gaps = 10/114 (8%)
Query: 605 CFG--LLNAICTLASMQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRI 661
C G LL + + +V+ +G AVGR++D+T++S Y EL L F I+G+L +
Sbjct: 507 CLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTK- 565
Query: 662 GWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS------LDGDF 709
W++VY D E+D+++VGDDPW EF + VR I I + +EV+++S L G+F
Sbjct: 566 KWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELSPKAKLPLKGEF 619
>GSVIVT01023149001 assembled CDS
Length = 678
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 613 CTLASMQVYKRGAVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEN 672
CT MQ AVGR++D+TR+ Y++L + L F I+G+L I W++VY D E+
Sbjct: 555 CTKVHMQGI---AVGRAVDLTRFDRYEDLLKKLEEMFDIQGELCGLTSI-WQVVYTDDED 610
Query: 673 DVLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 704
D+++VGDDPW EF + VR I I + +EV+++S
Sbjct: 611 DMMMVGDDPWLEFCSMVRKIFIYTAEEVKRLS 642
>GSVIVT01004942001 assembled CDS
Length = 767
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Query: 609 LNAICTLASMQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVY 667
L++ T + ++V+K+G AVGRS+D+T+++ Y EL +L + F G+L + W +V+
Sbjct: 632 LHSGSTRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNK-DWLIVF 690
Query: 668 VDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQM 703
D E D++LVGDDPW EF + VR I + + +E+Q+M
Sbjct: 691 TDDEGDMMLVGDDPWPEFCSMVRKIFVYTREEIQRM 726
>GSVIVT01011008001 assembled CDS
Length = 696
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 605 CFGLLNAICTLASMQVYKRG-AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGW 663
C ++ CT +V K G A+GRSID+ R+ YDEL +L + F G L D W
Sbjct: 596 CCSVMVRSCT----KVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDGS-CRW 650
Query: 664 KLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQM 703
+ Y D E D++L+GD PW+EF + V+ I I +E +++
Sbjct: 651 HVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERL 690
>GSVIVT01016972001 assembled CDS
Length = 364
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 31/127 (24%)
Query: 610 NAICTLASMQVYKRG----------AVGRSIDITRYSDYDELKQDLARRF---------- 649
N I + ++V K+G +GR +D+T Y Y++L + F
Sbjct: 223 NKIASEKPVEVGKKGLFVKINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDS 282
Query: 650 ---GIEGQLEDRQRIG--------WKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQ 698
GI+ + E+ + I + LVY D+E D +LVGD PW FVN V+ +++L
Sbjct: 283 SAGGIQTKHEEEKTITGLLDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSS 342
Query: 699 EVQQMSL 705
E+ + L
Sbjct: 343 ELSALCL 349
>GSVIVT01029497001 assembled CDS
Length = 45
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 26/33 (78%)
Query: 682 WEEFVNCVRCIKILSPQEVQQMSLDGDFGNSVF 714
+ EFVN V IKIL P+EVQQMSLDGD GNSV
Sbjct: 8 FREFVNWVSYIKILYPEEVQQMSLDGDIGNSVL 40
>GSVIVT01015573001 assembled CDS
Length = 184
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 625 AVGRSIDITRYSDYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEE 684
+ R ID++R+ Y L L FG Q D Q +KL Y D E D LL GD PW
Sbjct: 114 GIARKIDLSRHHSYQTLTNTLINMFGKCQQ--DAQ--SFKLAYQDREGDWLLAGDVPWRT 169
Query: 685 FVNCVRCIKIL 695
F+ V +KIL
Sbjct: 170 FIQSVERLKIL 180