Jatropha Genome Database

JcCB0123971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0123971.10 + phase: 0 /pseudo/partial
         (219 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01017353001 assembled CDS                                       295   1e-80
GSVIVT01026766001 assembled CDS                                       289   8e-79
GSVIVT01027339001 assembled CDS                                       217   3e-57
GSVIVT01027342001 assembled CDS                                       214   2e-56
GSVIVT01027333001 assembled CDS                                       211   2e-55
GSVIVT01027327001 assembled CDS                                       206   7e-54
GSVIVT01027318001 assembled CDS                                       199   6e-52
GSVIVT01035966001 assembled CDS                                       164   2e-41
GSVIVT01018212001 assembled CDS                                       155   1e-38
GSVIVT01004719001 assembled CDS                                       150   5e-37
GSVIVT01027335001 assembled CDS                                       132   1e-31
GSVIVT01020843001 assembled CDS                                       120   5e-28
GSVIVT01015428001 assembled CDS                                       113   7e-26
GSVIVT01018187001 assembled CDS                                        81   3e-16
GSVIVT01004793001 assembled CDS                                        57   5e-09
GSVIVT01035128001 assembled CDS                                        49   2e-06

>GSVIVT01017353001 assembled CDS
          Length = 383

 Score =  295 bits (755), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 139/168 (82%), Positives = 154/168 (91%), Gaps = 1/168 (0%)

Query: 52  CSQGGDVSAVVRDIREGNWRLGANFFEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASM 111
           CS GGDV+AVV DI  GNW++GA FF +EY+LNYVMATY+KPQVSILNGIVMGGGAGAS+
Sbjct: 70  CS-GGDVAAVVHDINRGNWKIGAKFFWEEYILNYVMATYSKPQVSILNGIVMGGGAGASV 128

Query: 112 HGRFRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLACGL 171
           HGRFR+ATENS+FAMPETALGLFPDVGA+YFLSR PGFFGEYVGLTGARLDGAEMLACGL
Sbjct: 129 HGRFRIATENSVFAMPETALGLFPDVGASYFLSRFPGFFGEYVGLTGARLDGAEMLACGL 188

Query: 172 ATHFVPSENLSLLEEALYKADTSDPAIISLIIDEYSQQPYLKEQSTYH 219
           ATHFVPS  LS LE AL+K D+SDPAIIS +IDEYS QPYLK++STYH
Sbjct: 189 ATHFVPSARLSSLEAALHKLDSSDPAIISAVIDEYSLQPYLKDKSTYH 236


>GSVIVT01026766001 assembled CDS
          Length = 383

 Score =  289 bits (739), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 138/165 (83%), Positives = 149/165 (90%)

Query: 55  GGDVSAVVRDIREGNWRLGANFFEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASMHGR 114
           GGDV+AVVRDI  G+WRLGA FF KE++LNYVMATY+KPQVSILNGIVMGGGAGASMHGR
Sbjct: 72  GGDVAAVVRDINGGDWRLGAKFFWKEFILNYVMATYSKPQVSILNGIVMGGGAGASMHGR 131

Query: 115 FRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 174
           FR+ATENS+FAMPETALGLFPDVGA+YFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH
Sbjct: 132 FRIATENSVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 191

Query: 175 FVPSENLSLLEEALYKADTSDPAIISLIIDEYSQQPYLKEQSTYH 219
           FVPS  L LLE AL K D+  PA IS I+DEYSQQP+LKE S YH
Sbjct: 192 FVPSTRLLLLEAALCKLDSGAPATISSILDEYSQQPHLKENSAYH 236


>GSVIVT01027339001 assembled CDS
          Length = 263

 Score =  217 bits (552), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 102/165 (61%), Positives = 131/165 (79%)

Query: 55  GGDVSAVVRDIREGNWRLGANFFEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASMHGR 114
           GGDV  +V  I EG+W  GA+F++K+  L+Y++AT TKP VS++NGI+MGGGAG SM+  
Sbjct: 98  GGDVVGMVLSINEGHWSFGASFYKKQLTLDYLLATSTKPLVSLINGIIMGGGAGLSMNSM 157

Query: 115 FRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 174
           FRV TEN++FAMPE  +GLFPDVGA+YFLSRLPG+FGEY+GLTGARLDG EMLACGLATH
Sbjct: 158 FRVVTENTVFAMPEGQIGLFPDVGASYFLSRLPGYFGEYLGLTGARLDGKEMLACGLATH 217

Query: 175 FVPSENLSLLEEALYKADTSDPAIISLIIDEYSQQPYLKEQSTYH 219
           FV S++L LLE AL +  +SD + IS +I  +S +  LK++S Y 
Sbjct: 218 FVLSKDLLLLENALSEVASSDASTISRVISGFSSKISLKKESAYR 262


>GSVIVT01027342001 assembled CDS
          Length = 409

 Score =  214 bits (546), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/165 (61%), Positives = 130/165 (78%)

Query: 55  GGDVSAVVRDIREGNWRLGANFFEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASMHGR 114
           GGDV  +V  I EG+W  GA+F++K+  L+Y++AT TKP VS++NGIVMGGGAG SM+  
Sbjct: 98  GGDVVGMVLSINEGHWSFGASFYKKQLTLDYLLATSTKPLVSLINGIVMGGGAGLSMNSM 157

Query: 115 FRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 174
           FRV TEN++FAMPE  +G FPDVGA+YFLSRLPG+FGEY+GLTGARLDG EMLACGLATH
Sbjct: 158 FRVVTENTVFAMPEGQIGFFPDVGASYFLSRLPGYFGEYLGLTGARLDGKEMLACGLATH 217

Query: 175 FVPSENLSLLEEALYKADTSDPAIISLIIDEYSQQPYLKEQSTYH 219
           FV S++L LLE AL +  +SD + IS +I  +S +  LK++S Y 
Sbjct: 218 FVLSKDLLLLENALSEVASSDASTISRVISGFSSKISLKKESAYR 262


>GSVIVT01027333001 assembled CDS
          Length = 385

 Score =  211 bits (537), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 103/165 (62%), Positives = 126/165 (76%)

Query: 55  GGDVSAVVRDIREGNWRLGANFFEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASMHGR 114
           GGDV  VV  I EG+W  GA+F++K+  L+Y +AT TKP VS++NGIVMGGGAG SM+  
Sbjct: 85  GGDVVRVVLSINEGHWSFGASFYKKQLTLDYFLATCTKPLVSLINGIVMGGGAGLSMNSM 144

Query: 115 FRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 174
           FRV TEN++FAMPE  +G FPDVGA+YFLSRLPG FGEY+GLTGARLDG EMLACGLATH
Sbjct: 145 FRVVTENTVFAMPEGQIGFFPDVGASYFLSRLPGSFGEYLGLTGARLDGNEMLACGLATH 204

Query: 175 FVPSENLSLLEEALYKADTSDPAIISLIIDEYSQQPYLKEQSTYH 219
           FV S++L LLE AL    +SD + IS +I  +S +  LK+ S Y 
Sbjct: 205 FVLSKDLLLLESALSGVASSDASTISRVISGFSSKISLKKDSAYR 249


>GSVIVT01027327001 assembled CDS
          Length = 385

 Score =  206 bits (524), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 99/165 (60%), Positives = 126/165 (76%)

Query: 55  GGDVSAVVRDIREGNWRLGANFFEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASMHGR 114
           GGDV  ++  I  G+W  GA F++K+  L+Y++AT TKP VS++NGIVMGGGAG SM+  
Sbjct: 72  GGDVVGILLSIINGHWSFGARFYKKQLTLDYLIATSTKPLVSLINGIVMGGGAGLSMNSM 131

Query: 115 FRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 174
           FRV TEN++FAMPE  +GLFPDVGA+YFLSRL G FGEY+GLTGARLDG+EMLACGLATH
Sbjct: 132 FRVVTENTVFAMPEGQIGLFPDVGASYFLSRLSGSFGEYLGLTGARLDGSEMLACGLATH 191

Query: 175 FVPSENLSLLEEALYKADTSDPAIISLIIDEYSQQPYLKEQSTYH 219
           FV S++L LLE AL +  +SD   IS +I  +S +  LK+ S + 
Sbjct: 192 FVLSKDLLLLENALSEVASSDALTISRVISAFSSKISLKKDSAFR 236


>GSVIVT01027318001 assembled CDS
          Length = 350

 Score =  199 bits (507), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 97/170 (57%), Positives = 129/170 (75%), Gaps = 2/170 (1%)

Query: 49  QIHCSQGGDVSAVVRDIREGNWRLGANFFEKEYMLNYVMATYTKPQVSILNGIVMGGGAG 108
           ++ CS GGDV A+V  I  G+W  G +F+ K+  L+Y+ AT  K  VS++NGIVMGGG G
Sbjct: 35  KVFCS-GGDVVAMVLSIYGGHWSFGESFYRKQITLDYLFATSEKTLVSLINGIVMGGGVG 93

Query: 109 ASMHGRFRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLA 168
            SM+ RFRV TEN++FAMPE  +G FPDVG +YFLSRLPGFFGEY+GLTGA+L+G EMLA
Sbjct: 94  LSMNSRFRVVTENTVFAMPEAQMGHFPDVGVSYFLSRLPGFFGEYLGLTGAQLNGTEMLA 153

Query: 169 CGLATHFVPSENLSLLEEALYKADTSDPAIISLIIDEYSQQPYLKEQSTY 218
           CGLATHFV S++L LLE AL +A  SD + I  +I+ ++++ +LK+ S +
Sbjct: 154 CGLATHFVLSKDLLLLETALSEA-ASDTSTIPKVINRFARKTFLKQDSAF 202


>GSVIVT01035966001 assembled CDS
          Length = 407

 Score =  164 bits (416), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 111/168 (66%), Gaps = 1/168 (0%)

Query: 52  CSQGGDVSAVVRDIREGNWRLGANFFEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASM 111
           CS GGDV A+ + I EG       FFE  Y   Y++ TY KP V+I++GI MGGGAG S+
Sbjct: 100 CS-GGDVVALNQLINEGKVEECKKFFETLYKFVYLLGTYVKPNVAIVDGITMGGGAGISI 158

Query: 112 HGRFRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLACGL 171
              FRV T+ ++FA PET +G  PD GA+++LSRLPG+ GEY+ LTG +L+G EM+ACGL
Sbjct: 159 PAMFRVVTDKTVFATPETQMGFHPDAGASFYLSRLPGYLGEYLALTGEKLNGVEMIACGL 218

Query: 172 ATHFVPSENLSLLEEALYKADTSDPAIISLIIDEYSQQPYLKEQSTYH 219
           ATH+  +  L L+EE L K  T DP++I   +++Y    Y  ++S  H
Sbjct: 219 ATHYSLTARLPLIEERLGKLITDDPSVIESSLEQYGDLVYPDKRSVLH 266


>GSVIVT01018212001 assembled CDS
          Length = 405

 Score =  155 bits (392), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/152 (49%), Positives = 102/152 (67%)

Query: 55  GGDVSAVVRDIREGNWRLGANFFEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASMHGR 114
           GGD+  +   I +G       FF   Y   Y++ TY KP V+IL+GI MGGGAG S+ G 
Sbjct: 100 GGDIVGLYNLINKGRIEDCKEFFGTVYSFIYLVGTYLKPNVAILDGITMGGGAGVSIPGM 159

Query: 115 FRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 174
           FRVAT+ ++FA PET +G   D GA++ LS LPG++GEY+ LTG +L+G EM+ACGLATH
Sbjct: 160 FRVATDRTVFATPETLIGFHTDAGASFHLSHLPGYWGEYLALTGEKLNGPEMIACGLATH 219

Query: 175 FVPSENLSLLEEALYKADTSDPAIISLIIDEY 206
           + PS  L L+EE L K  T DP++I   +++Y
Sbjct: 220 YAPSAKLPLIEEGLGKLVTDDPSVIEASLEQY 251


>GSVIVT01004719001 assembled CDS
          Length = 438

 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 106/164 (64%)

Query: 53  SQGGDVSAVVRDIREGNWRLGANFFEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASMH 112
           S GGDV  + + + EG      + F   Y L Y++ TY KP V++++G+ MG GAG S+ 
Sbjct: 131 SAGGDVVCLYQFMDEGRLEDCKDCFRTFYSLMYLIHTYMKPHVALIDGVTMGAGAGISVL 190

Query: 113 GRFRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLDGAEMLACGLA 172
           G F VAT+ ++F  PE  +G  PD GA+YFLS LPG+ GEY+GLTGA L GAEM+ACGLA
Sbjct: 191 GTFCVATDRTVFGTPEALIGFHPDGGASYFLSHLPGYLGEYMGLTGATLSGAEMVACGLA 250

Query: 173 THFVPSENLSLLEEALYKADTSDPAIISLIIDEYSQQPYLKEQS 216
           TH+  S  + L+EE L    + DP++I  ++ ++S   Y  E+S
Sbjct: 251 THYSLSAKIPLIEEQLKTLLSDDPSVIEAVLAKFSDVAYPDERS 294


>GSVIVT01027335001 assembled CDS
          Length = 116

 Score =  132 bits (332), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/117 (55%), Positives = 87/117 (74%), Gaps = 2/117 (1%)

Query: 103 MGGGAGASMHGRFRVATENSIFAMPETALGLFPDVGATYFLSRLPGFFGEYVGLTGARLD 162
           MGGG G SM+  FRV TEN++ A+P+  + LF DVGA+YFLSRLPGF GEY+GLTG +LD
Sbjct: 1   MGGGTGLSMNSMFRVVTENTVLAIPKGQIRLFLDVGASYFLSRLPGFVGEYLGLTGTQLD 60

Query: 163 GAEMLACGLATHFVPSENLSLLEEALYKADTSDPAIISLIIDEYSQQPYLKEQSTYH 219
           G E++ACGLATHFV S++L LLE AL +  + D + IS +I+ +S+   LK+ S + 
Sbjct: 61  GNEIIACGLATHFVLSKDLFLLENALSEVASLDASTISRVINGFSRS--LKKDSAFR 115


>GSVIVT01020843001 assembled CDS
          Length = 389

 Score =  120 bits (301), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 85/136 (62%)

Query: 81  YMLNYVMATYTKPQVSILNGIVMGGGAGASMHGRFRVATENSIFAMPETALGLFPDVGAT 140
           Y L Y + +Y K QV++++GI MGGGA   +  +F V TE ++FA PE  +G   D G +
Sbjct: 95  YWLCYHIHSYKKTQVALVHGISMGGGASLMVPMKFSVVTEKTVFATPEATIGFHTDCGFS 154

Query: 141 YFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSENLSLLEEALYKADTSDPAIIS 200
           Y LS LPG  GE++ LTGARL+G E++  GLATH+VPSE +  LE+ L   ++ D   I 
Sbjct: 155 YMLSHLPGHLGEFIALTGARLNGKELVTVGLATHYVPSEKMPELEKRLMCLNSGDRNAIK 214

Query: 201 LIIDEYSQQPYLKEQS 216
             I+E+S    + E S
Sbjct: 215 SAIEEFSLDVKVDEDS 230


>GSVIVT01015428001 assembled CDS
          Length = 407

 Score =  113 bits (282), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 88/144 (61%), Gaps = 5/144 (3%)

Query: 77  FEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASMHGRFRVATENSIFAMPETALGLFPD 136
           F  EY L   ++ Y KP +S+++GI MG G G S HGR+R+ TE ++ AMPE  +GLFPD
Sbjct: 119 FTAEYSLICKISEYKKPYISLMDGITMGFGIGLSGHGRYRIVTERTLLAMPENGIGLFPD 178

Query: 137 VGATYFLSRLP--GFFGEYVGLTGARLD-GAEMLACGLATHFVPSENLSLLEEALYKAD- 192
           VG  Y  ++ P  G  G Y+G+TG R+   A+ L  GL TH+VPS NLS L+EAL     
Sbjct: 179 VGFAYIAAQSPGEGSVGAYLGMTGKRISTSADALYVGLGTHYVPSGNLSSLKEALLTTSF 238

Query: 193 TSDP-AIISLIIDEYSQQPYLKEQ 215
           + DP   I  ++ +YS  P  + Q
Sbjct: 239 SEDPHQDIRELLVKYSHDPESEAQ 262


>GSVIVT01018187001 assembled CDS
          Length = 139

 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 53/82 (64%)

Query: 77  FEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASMHGRFRVATENSIFAMPETALGLFPD 136
           F   Y   Y++ TY  P V+IL+GI MG  AG S+ G FRVAT+ ++FA PET +G   D
Sbjct: 54  FRTVYSFIYLVGTYLNPNVAILDGITMGSRAGVSILGMFRVATDRTVFATPETLIGFHTD 113

Query: 137 VGATYFLSRLPGFFGEYVGLTG 158
            GA++ LS LPG++G  +G  G
Sbjct: 114 AGASFHLSHLPGYWGGILGSNG 135


>GSVIVT01004793001 assembled CDS
          Length = 644

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 10/122 (8%)

Query: 64  DIREGNWRLGANFFEKEYMLNYVMATYT------KPQVSILNGIVMGGGAGASMHGRFRV 117
           D++E   R   N  E  + +N + +T++       P ++++ G  +GGG   ++    R+
Sbjct: 451 DLKE---RKTMNPSETRFFVNSLRSTFSLLEALHVPTIAVIEGAALGGGLEMALSCDLRI 507

Query: 118 ATENSIFAMPETALGLFPDVGATYFLSRLPG-FFGEYVGLTGARLDGAEMLACGLATHFV 176
             E+++  +PET L + P  G T  LSRL G    + +  TG ++ G + ++ GL  + V
Sbjct: 508 CGEDAVLGLPETGLAIIPGAGGTQRLSRLVGKSIAKELIFTGRKVGGRDAMSVGLVNYCV 567

Query: 177 PS 178
           P+
Sbjct: 568 PA 569


>GSVIVT01035128001 assembled CDS
          Length = 765

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 17/137 (12%)

Query: 76  FFEKEYMLNYVMATYTKPQVSILNGIVMGGGAGASMHGRFRVATENSIFAMPETALGLFP 135
           F   E + + V A   KP V+ ++G+ +GGG   +M    R++T N+   +PE  LG+ P
Sbjct: 128 FVSVEILTDTVEAA-RKPSVAAIDGLALGGGLEVAMGCHARISTPNAQLGLPELQLGIIP 186

Query: 136 DVGATYFLSRLPGFFGEY-VGLTGARLDGAEMLACGLATHFVPSEN---------LSLLE 185
             G T  L RL G      + L    + G +  + GL    V  +          L +LE
Sbjct: 187 GFGGTQRLPRLVGLSKALEMMLMSKPVKGVDAHSLGLVDAVVAPDQLVKTARQWALDILE 246

Query: 186 ------EALYKADTSDP 196
                  +LYK D  +P
Sbjct: 247 CRRPWVHSLYKTDKLEP 263