Jatropha Genome Database
- JcCB0119431.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0119431.10 - phase: 1 /TE
(1413 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01012382001 assembled CDS 179 7e-45
GSVIVT01000641001 assembled CDS 178 2e-44
GSVIVT01013655001 assembled CDS 178 2e-44
GSVIVT01031724001 assembled CDS 149 8e-36
GSVIVT01009548001 assembled CDS 132 9e-31
GSVIVT01028343001 assembled CDS 121 3e-27
GSVIVT01013341001 assembled CDS 94 3e-19
GSVIVT01036343001 assembled CDS 90 8e-18
GSVIVT01016108001 assembled CDS 87 8e-17
GSVIVT01010555001 assembled CDS 82 2e-15
GSVIVT01018138001 assembled CDS 68 3e-11
GSVIVT01015960001 assembled CDS 67 8e-11
GSVIVT01011334001 assembled CDS 57 8e-08
GSVIVT01024357001 assembled CDS 57 9e-08
GSVIVT01034817001 assembled CDS 53 1e-06
GSVIVT01026124001 assembled CDS 51 4e-06
>GSVIVT01012382001 assembled CDS
Length = 952
Score = 179 bits (455), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 127/198 (64%), Gaps = 1/198 (0%)
Query: 1183 VNKLSQFMQSPSSAHWEALKRLLRYLKSTIDYGIKITPQSAFHFHAFSDADWXGDPLDRS 1242
V+ +SQ+M +P+ H +KR+LRYLK TI GI + FSD+DW G+ +DR
Sbjct: 751 VSLVSQYMHAPTVVHLCMVKRILRYLKKTIGRGIVMRRNGHTDIIGFSDSDWAGNTIDRR 810
Query: 1243 STTGYILYLGNVPISWASRKQKSVARSSTEAEYRAVASTASEVMWVSSLLTELGVLSSVQ 1302
STTGY +++G +SW S+KQ VARSS EAEYRA+A+ + E++W+ +LLT+LG S
Sbjct: 811 STTGYCMFVGGNLVSWKSKKQPVVARSSAEAEYRAMAAASCEMVWLKNLLTDLG-FSPTS 869
Query: 1303 VPVIYCDNISTTYVCQNPVYHSRMKHIEIDIHFVRDLVQKKKLRISHVSAQDQLADVLTK 1362
++CDN + ++ NPV+H R KHIE+D HF+R VQ K ++ ++ + DQLAD TK
Sbjct: 870 PMKLFCDNQAAMHIAANPVFHERTKHIEVDCHFIRQQVQSKVIQTHYIRSSDQLADAFTK 929
Query: 1363 PQAKTVFALNRTKIGVSD 1380
+ TVF K+G D
Sbjct: 930 VLSSTVFHRLMFKLGSID 947
>GSVIVT01000641001 assembled CDS
Length = 947
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 139/222 (62%), Gaps = 1/222 (0%)
Query: 1148 LLKNVTGKGVNATEYRKLVGALQYLTWTRPDICYAVNKLSQFMQSPSSAHWEALKRLLRY 1207
L K+ GK V++ Y+++VG+L YLT TRPDI ++V+ +S++M++P+ H+ A K++ RY
Sbjct: 222 LNKDHGGKKVDSIIYKQIVGSLMYLTATRPDIMHSVSLISRYMENPTELHFLAAKKICRY 281
Query: 1208 LKSTIDYGIKITPQSAFHFHAFSDADWXGDPLDRSSTTGYILYLGNVPISWASRKQKSVA 1267
L+ T D+G+ F+D+D+ GD +R ST+GY+ LG +SW+S+KQ V
Sbjct: 282 LQGTKDFGLFYKKGKRSDLIGFTDSDYAGDQDNRRSTSGYVFMLGTGAVSWSSKKQPIVT 341
Query: 1268 RSSTEAEYRAVASTASEVMWVSSLLTELGVLSSVQVPVIYCDNISTTYVCQNPVYHSRMK 1327
S+TEAE+ A A + +W+ +L EL L V I+CDN ST + +NPV H R K
Sbjct: 342 LSTTEAEFVAATVCACQAIWLRKILEELH-LKQVGATTIFCDNSSTIKLSKNPVLHGRSK 400
Query: 1328 HIEIDIHFVRDLVQKKKLRISHVSAQDQLADVLTKPQAKTVF 1369
HI++ +F+RDL + + + +++Q+AD+ TKP VF
Sbjct: 401 HIDVKYYFLRDLSNDGVIDLVYCRSENQVADIFTKPLKLAVF 442
>GSVIVT01013655001 assembled CDS
Length = 4396
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query: 1183 VNKLSQFMQSPSSAHWEALKRLLRYLKSTIDYGIKITPQSAFHFHAFSDADWXGDPLDRS 1242
+NKLSQFM P+S HW A+KRLLRYL T+D+GI + S HAFSD+DW G+ D +
Sbjct: 4255 MNKLSQFMHQPTSDHWNAVKRLLRYLCGTLDHGITLRRTSPLALHAFSDSDWAGNKDDFT 4314
Query: 1243 STTGYILYLGNVPISWASRKQKSVARSSTEAEYRAVASTASEVMWVSSLLTELGVLSSVQ 1302
ST+ YI+YLG+ PISW+S+KQ++VARSSTEAEYR+VASTA+E+ W+ SLLTELGV + Q
Sbjct: 4315 STSAYIIYLGHNPISWSSKKQRTVARSSTEAEYRSVASTAAEIRWICSLLTELGV-TLPQ 4373
Query: 1303 VPVIYCDNISTTYVC 1317
PVIYCDN+ T++C
Sbjct: 4374 QPVIYCDNVGATHLC 4388
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%)
Query: 25 GHNLLGYVDRSLPCPSPIISKDGEDIANPDYEHWICQDXLXXXXXXXXXXXXXXXXXXNA 84
G++L ++D S P P IS + NP Y+ W+ QD L +
Sbjct: 7 GYDLQKFIDGSHPAPPTTISTNNVISTNPAYQTWLRQDKLLFGALVGTLSPTLVPLITQS 66
Query: 85 ETAADAWDKVQTTCANKSATRVLSLREKLSNCKRDSKSVQEYLQNITVISDALALSGSPV 144
+T+ +AW + T A S + L++ L N + S+S+ +Y+Q+I +D LA G P+
Sbjct: 67 KTSYEAWQILANTYARPSRGHIKQLKDHLKNITKGSQSITDYMQSIKTRADELAALGKPL 126
Query: 145 SDVDLVINTLNGIGSDFRDIAAAVRARDSIITFAELEDKLLAHEEFLKQNDSTVPIVAN 203
DL+ L G+ +++ I AV RDS I+F EL +KL+ E L+ S P+ A+
Sbjct: 127 DQEDLIEKVLEGLDENYQSIIDAVNGRDSTISFDELHEKLINKELSLRNKISPSPLPAS 185
>GSVIVT01031724001 assembled CDS
Length = 1135
Score = 149 bits (377), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 116/187 (62%), Gaps = 3/187 (1%)
Query: 1122 YIRKLLVAARMEGVKPVSTPFATTTTLLKNVTGKGVNATEYRKLVGALQYLTWTRPDICY 1181
YI LL A + K V++P A L + + T YR LVGALQY T TRPDI Y
Sbjct: 950 YICDLLQRAGLSESKLVTSPMAVGHVLSIADGTRFEDPTLYRSLVGALQYCTITRPDIAY 1009
Query: 1182 AVNKLSQFMQSPSSAHWEALKRLLRYLKSTIDYGIKITPQSAFHFHAFSDADWXGDPLDR 1241
+NK QFM +P+S H +A+KR+LRYLK ++ YG+ P S+ A++DAD P DR
Sbjct: 1010 TINKFFQFMHAPTSTHLQAVKRVLRYLKGSLFYGLSFQPSSSLDLIAYTDADGASCPDDR 1069
Query: 1242 SSTTGY-ILYLGNVPISWASRKQKSVARSSTEAEYRAVASTASEVMWVSSLLTELGVLSS 1300
ST GY I + GN+ ISW++ KQK V+RSS E++YR +A+ E+ W+ SLL EL +
Sbjct: 1070 RSTNGYCIFFRGNL-ISWSASKQKVVSRSSIESKYRGLANATIELTWIQSLLKEL-FVPL 1127
Query: 1301 VQVPVIY 1307
Q PV++
Sbjct: 1128 FQPPVLF 1134
>GSVIVT01009548001 assembled CDS
Length = 849
Score = 132 bits (333), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 7/229 (3%)
Query: 1156 GVNATEYRKLVGALQYL-TWTRPDICYAVNKLSQFMQSPSSAHWEALKRLLRYLKSTIDY 1214
+ A Y +G+L Y RP+I + VN L +++ + HW A K+++RYL+ T D+
Sbjct: 590 AMKAIPYASAIGSLMYAQACIRPNIVFIVNVLGRYLSNLGQYHWVAAKKVMRYLQRTNDF 649
Query: 1215 GIKITPQSAFHFHAFSDADWXGDPLDRSSTTGYILYLGNVPISWASRKQKSVARSSTEAE 1274
+ +S++D+ G D ST+GYI L ISW S KQ +A S+ A+
Sbjct: 650 MLVYRRVDNLEVVGYSNSDFNGCSDDCKSTSGYIFMLTGGAISWKSVKQSLIAFSTMYAK 709
Query: 1275 YRAVASTASEVMWVSSLLTELGVLSSVQVP-VIYCDNISTTYVCQNPVYHSRMKHIEIDI 1333
+ A +S+V+W+ L++EL V+ S+ P VIYCDN +T + +N + KH+EI
Sbjct: 710 FVACYGASSQVVWLRKLISELQVVDSIFRPIVIYCDNNATVFYSKNNKISTSSKHMEIKY 769
Query: 1334 HFVRDLVQKKKLRISHVSAQDQLADVLTKPQAKTVFA-----LNRTKIG 1377
V+DLV+K+ + I H+ + LAD LTK +F + R++IG
Sbjct: 770 LIVKDLVKKEDIVIKHIRTESMLADPLTKGLKPIMFKEHVVNMGRSRIG 818
>GSVIVT01028343001 assembled CDS
Length = 2295
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 1240 DRSSTTGYILYLGNVPISWASRKQKSVARSSTEAEYRAVASTASEVMWVSSLLTELGVLS 1299
DR ST+GY +++G ISW S+KQ VARSS EAEYRA+A E++W+ LL EL
Sbjct: 1466 DRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGK 1525
Query: 1300 SVQVPVIYCDNISTTYVCQNPVYHSRMKHIEIDIHFVRDLVQKKKLRISHVSAQDQLADV 1359
Q+ +I CDN + ++ NPV+H R KHIE+D HF+R+ + + S V++ DQLAD+
Sbjct: 1526 DEQMKLI-CDNQAALHIASNPVFHERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADI 1584
Query: 1360 LTK 1362
TK
Sbjct: 1585 FTK 1587
>GSVIVT01013341001 assembled CDS
Length = 503
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%)
Query: 1190 MQSPSSAHWEALKRLLRYLKSTIDYGIKITPQSAFHFHAFSDADWXGDPLDRSSTTGYIL 1249
M SP AH + ++L+YLK T G+ F AF+DADW G DR ST+GY
Sbjct: 1 MHSPYEAHMNVVYKILQYLKGTPRKGLHFGKHDQFKIEAFTDADWAGSIEDRRSTSGYCT 60
Query: 1250 YLGNVPISWASRKQKSVARSSTEAEYRAVASTASEVMWVSSLLTELGV 1297
++ I+W S+KQ VARSS E ++R++A EV+W+ +L EL +
Sbjct: 61 FVFGNLITWRSKKQNVVARSSAEVKFRSIAHGICEVLWIKRVLEELKI 108
>GSVIVT01036343001 assembled CDS
Length = 1201
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 6/209 (2%)
Query: 3 FPLKLSPQNYPSWRAQIVPVLRGHNLLGYVDRSLPCPSPIISKDGEDIANPDYEHWICQD 62
P+KL N+ W Q+ V+ + +++ PCP IS GE NPD+ W D
Sbjct: 129 LPIKLDRDNHILWHTQMENVIYANGFEDHIEGLRPCPPKTIST-GE--VNPDFLVWRRYD 185
Query: 63 XLXXXXXXXXXXXXXXXXXXNAETAADAWDKVQTTCANKSATRVLSLREKLSNCKRDSKS 122
+ +T+ +AW +Q + + + R + LR K+ S +
Sbjct: 186 RMILSWIYSSLTPDVMGQIVGLQTSHEAWTALQRSFSASTKARTMQLRLAFQTNKKGSLT 245
Query: 123 VQEYLQNITVISDALALSGSPVSDVDLVINTLNGIGSDFRDIAAAVRARDSIITFAELED 182
+ EY+Q + ISD+LA G PV + D ++ L+G+G+++ I A++ RD I +
Sbjct: 246 MMEYIQKLKHISDSLAAIGEPVPEKDQILQLLSGLGAEYNPIIASLTTRDDDIQLHAVHS 305
Query: 183 KLLAHEEFLKQNDSTVP---IVANYVRRN 208
LL HE+ L + ++AN+ N
Sbjct: 306 ILLTHEQRLPLQTTPTEEDLLIANFATHN 334
>GSVIVT01016108001 assembled CDS
Length = 227
Score = 86.7 bits (213), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 2/195 (1%)
Query: 3 FPLKLSPQNYPSWRAQIVPVLRGHNLLGYVDRSLPCPSPIISKDGEDIANPDYEHWICQD 62
F ++L NY WR Q++ ++ + L + +P PS + D E+I NP+Y W CQ+
Sbjct: 29 FTVRLDQSNYLLWRTQMLNIIIANGLEEMIHGKIPAPSRFLG-DSENI-NPEYSIWQCQN 86
Query: 63 XLXXXXXXXXXXXXXXXXXXNAETAADAWDKVQTTCANKSATRVLSLREKLSNCKRDSKS 122
L +TA++ W ++ + S R++ L +L K+ S
Sbjct: 87 RLVMCWIYSSLTKGVMAQIIGLDTASEIWTALEKIFSAASKARIMQLHFQLQTTKKGGLS 146
Query: 123 VQEYLQNITVISDALALSGSPVSDVDLVINTLNGIGSDFRDIAAAVRARDSIITFAELED 182
+ EYL I I D L G +++ D ++ L G+G+ + V + ++ E+
Sbjct: 147 MMEYLLKIKSIVDNLLAIGENITEQDRILYLLAGLGAKYNSFVITVTSGHEPLSLEEIHS 206
Query: 183 KLLAHEEFLKQNDST 197
LL HE L+Q +T
Sbjct: 207 MLLTHENRLEQQHTT 221
>GSVIVT01010555001 assembled CDS
Length = 147
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 981 LDVNNAFLHGPLSENVYMQQPPGF-IDSEKPHYVCKLVKALYGLRQAPRAWYQALRNCAV 1039
+DV NAFL+G LSE VYMQ PPG ++S K VC L +ALYGL+QAPRAW+ +
Sbjct: 1 MDVKNAFLNGDLSEEVYMQPPPGLSVESNK---VCHLRRALYGLKQAPRAWFAKFSSTIF 57
Query: 1040 QFGFVQSKSDHSLFILQRGAKTCFFLVYVD 1069
+ G+ S D +LF+ + T L+Y +
Sbjct: 58 RLGYTASPYDSALFLRRTDKGTILLLLYSN 87
>GSVIVT01018138001 assembled CDS
Length = 98
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%)
Query: 1034 LRNCAVQFGFVQSKSDHSLFILQRGAKTCFFLVYVDDLLLTGNCNELIHLFISALGSKFS 1093
L + FGFV +KSD SLF+ + + VYVDD+L+T + I I+ L SKFS
Sbjct: 9 LHRALLSFGFVSTKSDQSLFLRFTPSHITYVFVYVDDILVTSSDTTAITSLIAQLNSKFS 68
Query: 1094 LKDPQKLNFFLGIDIHTTASGMFMSQHHYI 1123
LKD ++++FL I + T +G+ +SQ YI
Sbjct: 69 LKDLGEVHYFLVIQVSYTNNGLHLSQTKYI 98
>GSVIVT01015960001 assembled CDS
Length = 1205
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 1286 MWVSSLLTELGVLSSVQVPVIYCDNISTTYVCQNPVYHSRMKHIEIDIHFVRDLVQKKKL 1345
MW+ LL EL + S + +YCDN + V NPV H R KH+E+D HF+++ + +
Sbjct: 1 MWIRRLLEELKMTGSSPMK-LYCDNKAVISVAYNPVLHDRTKHVEVDKHFIKEKIDNGLV 59
Query: 1346 RISHVSAQDQLADVLTKPQAKTVF 1369
++++ ++Q+ADV TK K F
Sbjct: 60 CMTYIPTEEQVADVFTKGLHKRQF 83
>GSVIVT01011334001 assembled CDS
Length = 640
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 1041 FGFVQSKSDHSLFILQR-GAKTCFFLVYVDDLLLTGNCNELIHLFISALGSKFSLKDPQK 1099
FG+ SDH+LF+ +T +VYV D++LT + E I S +F +KD
Sbjct: 21 FGYSWCHSDHTLFVKHTVKGRTAIIIVYVGDIILTKDHEEEIGKLKSIFAHEFEIKDLGN 80
Query: 1100 LNFFLGIDIHTTASGMFMSQHHYIRKLLVAARM 1132
L +F G++I + G+ +SQ Y+ LL M
Sbjct: 81 LKYFFGMEITRSNMGIVVSQCKYVLDLLTEIEM 113
>GSVIVT01024357001 assembled CDS
Length = 851
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 872 VEPTRVTQALKLPKWRQAMNVEFDALITNGTWVLVPPAAGQNLVGCKWIFRVKRNPDGTV 931
VEP +A+K WR+AM E D + N TW LV + ++G KWI+RVK + DG +
Sbjct: 727 VEPQSFEEAIKDEDWRKAMEKEIDVIEKNETWQLVEKPIDKEIIGVKWIYRVKCHSDGYI 786
Query: 932 AK 933
K
Sbjct: 787 CK 788
>GSVIVT01034817001 assembled CDS
Length = 1111
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 5 LKLSPQNYPSWRAQIVPVLRGHNLLGYV--DRSLPCPSPIISKDGEDIANPDYEHWICQD 62
+KL NYP W+ Q+ +RG+ L G++ R +P P I +DG + NP Y + QD
Sbjct: 980 VKLDVTNYPIWKRQVQTAIRGYGLEGFILGTREVP-PELIQVEDGTQMVNPAYISYQQQD 1038
Query: 63 XLXXXXXXXXXXXXXXXXXXNAETAADAWDKVQTTCANKSATRVLSLREKLSNCKRDS 120
L +TA D W+ V ++S +++ + +L K+ S
Sbjct: 1039 HLLASWILASMSPSFLPQLVGCDTALDIWNTVGHIFTSQSTAKIMHYKHQLQILKKGS 1096
>GSVIVT01026124001 assembled CDS
Length = 1018
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 1285 VMWVSSLLTELGVLSSVQVPVIYCDNISTTYVCQNPVYHSRMKHIEIDIHFVRDLVQKKK 1344
++W+ LL EL ++ +++ D+ S ++ +N V+HS+ KHI+ HF+R L++ K
Sbjct: 1 MIWLHGLLDELA--KKQEMRILHSDSHSAIFLAKNSVFHSKSKHIQTKYHFIRYLIEDKL 58
Query: 1345 LRISHVSAQDQLADVLTK 1362
+ + + AD+LTK
Sbjct: 59 VILEKIYGSKNPADMLTK 76