Jatropha Genome Database

JcCB0103641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0103641.10 + phase: 0 
         (165 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01012250001 assembled CDS                                       113   5e-26
GSVIVT01036549001 assembled CDS                                        94   3e-20
GSVIVT01008140001 assembled CDS                                        90   5e-19
GSVIVT01012249001 assembled CDS                                        63   6e-11
GSVIVT01027577001 assembled CDS                                        62   9e-11
GSVIVT01008139001 assembled CDS                                        62   1e-10
GSVIVT01018450001 assembled CDS                                        60   5e-10
GSVIVT01027579001 assembled CDS                                        58   2e-09
GSVIVT01010521001 assembled CDS                                        58   3e-09
GSVIVT01008560001 assembled CDS                                        55   1e-08
GSVIVT01036551001 assembled CDS                                        54   3e-08
GSVIVT01000802001 assembled CDS                                        53   5e-08
GSVIVT01012110001 assembled CDS                                        52   1e-07
GSVIVT01009219001 assembled CDS                                        50   7e-07
GSVIVT01003861001 assembled CDS                                        49   8e-07
GSVIVT01019883001 assembled CDS                                        48   3e-06
GSVIVT01018446001 assembled CDS                                        48   3e-06
GSVIVT01021303001 assembled CDS                                        47   4e-06
GSVIVT01001437001 assembled CDS                                        47   4e-06
GSVIVT01010513001 assembled CDS                                        47   4e-06
GSVIVT01003864001 assembled CDS                                        47   5e-06

>GSVIVT01012250001 assembled CDS
          Length = 241

 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/106 (55%), Positives = 73/106 (68%), Gaps = 1/106 (0%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           +L  S+ HF+GEDLDSLSLKELQNLEQQ+D+ALKHIRSRKNQ MYESISELQ+K+KA+QE
Sbjct: 104 LLQRSQRHFLGEDLDSLSLKELQNLEQQLDTALKHIRSRKNQLMYESISELQRKEKAMQE 163

Query: 83  QNNQLXXXXXXXXXXMAXXXXXXXXXXXAVNSSPVLIPQSMQSFNL 128
           QNN L          +A            +N+S  L+PQ +   N+
Sbjct: 164 QNNMLAKEIKEKEKTVA-QQTHWEQQNHGLNTSSFLLPQQLPCLNM 208


>GSVIVT01036549001 assembled CDS
          Length = 247

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/65 (72%), Positives = 56/65 (86%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           VL  +  HF+GEDLD LSL+ELQNLEQQ+D+ALK IR+RKNQ M+ESISELQKK+K+L E
Sbjct: 104 VLQRNLRHFVGEDLDPLSLRELQNLEQQLDTALKRIRTRKNQLMHESISELQKKEKSLVE 163

Query: 83  QNNQL 87
           QNN L
Sbjct: 164 QNNAL 168


>GSVIVT01008140001 assembled CDS
          Length = 243

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/65 (70%), Positives = 56/65 (86%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           VL  S+ +FMGEDLDSLSLKELQNLEQQ+D++LK  R+RKNQ MYES+SEL KK KALQE
Sbjct: 104 VLQKSQRNFMGEDLDSLSLKELQNLEQQLDNSLKSTRTRKNQLMYESLSELHKKGKALQE 163

Query: 83  QNNQL 87
           +++ L
Sbjct: 164 EHDLL 168


>GSVIVT01012249001 assembled CDS
          Length = 243

 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 45/65 (69%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           VL  ++ +F+GEDL  L  KEL+ LE Q+D +LK IRS K Q M + +S+LQ+K++ L E
Sbjct: 103 VLQRTQRNFLGEDLGHLGTKELEQLEHQLDKSLKQIRSTKTQFMLDQLSDLQRKEQILME 162

Query: 83  QNNQL 87
            NN L
Sbjct: 163 ANNAL 167


>GSVIVT01027577001 assembled CDS
          Length = 244

 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 44/64 (68%)

Query: 24  LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
           L  ++ H +GEDL  LS+KELQNLE+Q++ AL   R RK Q M E + +L++K++ L + 
Sbjct: 102 LQRTQRHLLGEDLGPLSVKELQNLEKQLEGALAQARQRKTQMMIEQMEDLRRKERQLGDL 161

Query: 84  NNQL 87
           N QL
Sbjct: 162 NKQL 165


>GSVIVT01008139001 assembled CDS
          Length = 246

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 44/65 (67%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           VL  S+ H +GEDLD L+ KEL+ LE Q++ +LK IRS K Q M + +++LQ K+  L E
Sbjct: 104 VLQRSQRHLLGEDLDPLNTKELEQLEHQLEMSLKQIRSTKTQNMLDQLADLQNKEHMLIE 163

Query: 83  QNNQL 87
            NN L
Sbjct: 164 ANNAL 168


>GSVIVT01018450001 assembled CDS
          Length = 249

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 42/64 (65%)

Query: 24  LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
           L  S+ H +GEDL  LS+KELQNLE+ ++  L   R RK Q M + + EL+KK+  L+E 
Sbjct: 103 LMDSQRHLLGEDLGLLSIKELQNLEKMLEGTLSQARQRKAQMMLKQMDELKKKEHDLEEM 162

Query: 84  NNQL 87
           N QL
Sbjct: 163 NKQL 166


>GSVIVT01027579001 assembled CDS
          Length = 218

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 44/65 (67%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           +L  SK   +GE L S S++ELQ +EQQ++ ++  IR+RKNQ   E I +L++K+KAL  
Sbjct: 104 LLEISKRKLLGEGLGSCSIEELQQIEQQLERSVSSIRARKNQVFKEQIEQLKEKEKALAA 163

Query: 83  QNNQL 87
           +N  L
Sbjct: 164 ENAML 168


>GSVIVT01010521001 assembled CDS
          Length = 242

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 44/65 (67%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
            L  S+ + +GEDL  LS KEL++LE+Q+D +LK IRS + Q M + +++LQ+K+  L E
Sbjct: 105 ALQRSQRNLLGEDLGPLSTKELESLERQLDVSLKQIRSTRTQYMLDQLTDLQRKEHMLNE 164

Query: 83  QNNQL 87
            N  L
Sbjct: 165 ANKTL 169


>GSVIVT01008560001 assembled CDS
          Length = 235

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 21  RTV--LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDK 78
           RT+  L     H  GEDL +L +KEL+ LE+Q+ + ++ IR++K + + E IS L+K+ +
Sbjct: 99  RTIDTLEAKHKHLAGEDLSTLGMKELKQLERQLKNGVERIRAKKRRIISEHISLLKKRQR 158

Query: 79  ALQEQNNQL 87
           ALQE N +L
Sbjct: 159 ALQEDNTRL 167


>GSVIVT01036551001 assembled CDS
          Length = 243

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 44/64 (68%)

Query: 24  LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
           L  ++ + +GEDL  L+ KEL+ LE+Q++++LK +RS K Q M + +S+LQ K++ L E 
Sbjct: 104 LQRTQRNLLGEDLGPLNTKELEQLERQLETSLKQVRSTKTQFMLDQLSDLQNKEQVLVES 163

Query: 84  NNQL 87
           N  L
Sbjct: 164 NKAL 167


>GSVIVT01000802001 assembled CDS
          Length = 363

 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 18  RHFRTVLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKD 77
           R  R + N ++ H +GE L SL+ KEL+NLE +++  +  IRS+KN+ ++  I  +QK++
Sbjct: 188 RQIRDIQNLNR-HILGEALSSLNFKELKNLETRLEKGISRIRSKKNELLFAEIEYMQKRE 246

Query: 78  KALQEQN 84
             LQ  N
Sbjct: 247 IELQNSN 253


>GSVIVT01012110001 assembled CDS
          Length = 256

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 43/64 (67%)

Query: 24  LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
           L  S   + G+DL S+  K+L+ LEQQ++ ++K +R+RK Q + + I  LQ+K K L+++
Sbjct: 106 LQLSLQRYTGDDLSSIQFKDLEELEQQLEHSIKKVRARKYQLLQQQIDNLQRKAKMLEDE 165

Query: 84  NNQL 87
           N Q+
Sbjct: 166 NEQI 169


>GSVIVT01009219001 assembled CDS
          Length = 240

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 39/57 (68%)

Query: 31  FMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQNNQL 87
            MGE+L  LS+K+LQNLE Q++ +L+ +R +K+Q + + I EL +K   L  +N +L
Sbjct: 110 MMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILIDEIQELNQKGNLLHNENVEL 166


>GSVIVT01003861001 assembled CDS
          Length = 224

 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 40/57 (70%)

Query: 31  FMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQNNQL 87
            MGE+L  LS+K+LQNLE Q++ +L+ +R +K Q +   I EL++K   +Q++N +L
Sbjct: 110 LMGEELYGLSVKDLQNLENQLEMSLRGVRMKKEQILTNEIEELKQKGNLVQQENVEL 166


>GSVIVT01019883001 assembled CDS
          Length = 207

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 42/65 (64%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           +L  SK   +GE LDS S++ELQ +E +++ +L +IR +KN      I  L+++++ L E
Sbjct: 97  LLEVSKRRLLGECLDSCSIEELQQIENELEQSLSNIRIQKNHLCKGHIERLKEQERILGE 156

Query: 83  QNNQL 87
           +N +L
Sbjct: 157 ENAKL 161


>GSVIVT01018446001 assembled CDS
          Length = 203

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 42/65 (64%)

Query: 23  VLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQE 82
           +L  S+   +G+ L S SL E+  ++ Q++ +LK IR+RK Q   E I EL++++K L E
Sbjct: 96  LLEVSQRKLLGQGLSSCSLDEILEIDSQLEKSLKSIRARKAQIFQEQIEELKEREKQLLE 155

Query: 83  QNNQL 87
           +N +L
Sbjct: 156 ENARL 160


>GSVIVT01021303001 assembled CDS
          Length = 226

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 39/64 (60%)

Query: 24  LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQ 83
           L  S  H +GE L SL+ K+L++LE +++  +  IRSRKN+ ++  I  +QK++  L   
Sbjct: 104 LQNSNRHMLGESLGSLNFKDLKSLEIRLEKGISRIRSRKNELLFAEIEYMQKREIDLHND 163

Query: 84  NNQL 87
           N  L
Sbjct: 164 NQYL 167


>GSVIVT01001437001 assembled CDS
          Length = 248

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 33/49 (67%)

Query: 24  LNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISE 72
           L T +   +G+DL  LSLKELQNLEQQ++ +L  ++ RK Q + E + +
Sbjct: 101 LQTRQLQLLGKDLSGLSLKELQNLEQQLNESLLSVKERKEQVLMEQLEQ 149


>GSVIVT01010513001 assembled CDS
          Length = 165

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 1/77 (1%)

Query: 6   NPTYPCHTRVGDRHFRTVLNTSKTHFMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQ 65
           N +  CH     R +  +L T ++   G++ + +S+ +L  LE+++D+AL   +SRKNQ 
Sbjct: 40  NESENCHYEY-TRDWTELLQTVQSQLEGQNDEQMSVTDLVQLERELDAALLQTKSRKNQL 98

Query: 66  MYESISELQKKDKALQE 82
           M ESI  L +K++ L++
Sbjct: 99  MMESIRHLHEKERMLRQ 115


>GSVIVT01003864001 assembled CDS
          Length = 224

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 39/57 (68%)

Query: 31  FMGEDLDSLSLKELQNLEQQIDSALKHIRSRKNQQMYESISELQKKDKALQEQNNQL 87
            MGE+L  LS+K+LQNLE Q++ +L+ +  +K Q +   I EL++K   +Q++N +L
Sbjct: 110 LMGEELYGLSVKDLQNLENQLEMSLRGVHMKKEQILTNEIEELKQKGNLVQQENVEL 166