Jatropha Genome Database

JcCB0097811.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0097811.10 + phase: 0 /partial
         (142 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01019420001 assembled CDS                                       192   5e-50
GSVIVT01019523001 assembled CDS                                       146   4e-36
GSVIVT01012043001 assembled CDS                                       145   8e-36
GSVIVT01032798001 assembled CDS                                       142   6e-35
GSVIVT01030494001 assembled CDS                                       137   1e-33
GSVIVT01035481001 assembled CDS                                       134   1e-32
GSVIVT01019664001 assembled CDS                                       133   3e-32
GSVIVT01018619001 assembled CDS                                       131   9e-32
GSVIVT01018617001 assembled CDS                                       131   1e-31
GSVIVT01032799001 assembled CDS                                       129   3e-31
GSVIVT01037709001 assembled CDS                                       129   5e-31
GSVIVT01024179001 assembled CDS                                       125   9e-30
GSVIVT01037210001 assembled CDS                                       124   2e-29
GSVIVT01018793001 assembled CDS                                       116   3e-27
GSVIVT01010049001 assembled CDS                                       112   6e-26
GSVIVT01009881001 assembled CDS                                       111   1e-25
GSVIVT01023102001 assembled CDS                                       104   1e-23
GSVIVT01006152001 assembled CDS                                        94   3e-20
GSVIVT01028042001 assembled CDS                                        92   7e-20

>GSVIVT01019420001 assembled CDS
          Length = 503

 Score =  192 bits (487), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 89/140 (63%), Positives = 115/140 (82%), Gaps = 1/140 (0%)

Query: 4   WVVVLLLAI-SQGGLAIQNQELCFKASSYGDALGKAILFFDGQRSGKLPANQRVSWRADS 62
           W +VL   + S+ G+A++++ L      YG+ALGKAILFF+GQRSGKLP++QRV WR DS
Sbjct: 8   WGLVLWCVLASRNGVAMEDERLLGLGHDYGEALGKAILFFEGQRSGKLPSSQRVKWRGDS 67

Query: 63  ALSDGKPDNVNLTGGYYDAGDNVKFGWPMSYTLSLLSWAALEYQKEIASINLLGYLQNAI 122
           ALSDG P+NV L GGYYDAGDNVKFGWPM++++SLLSWAA+EY++EI+S+  L YL  AI
Sbjct: 68  ALSDGMPENVKLIGGYYDAGDNVKFGWPMAFSVSLLSWAAVEYRREISSVKQLTYLLQAI 127

Query: 123 RWGTNYLLKSHTSSTTFYTQ 142
           RWG N++L++HTSSTT YTQ
Sbjct: 128 RWGANFILRAHTSSTTLYTQ 147


>GSVIVT01019523001 assembled CDS
          Length = 629

 Score =  146 bits (368), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 64/119 (53%), Positives = 85/119 (71%)

Query: 24  LCFKASSYGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGD 83
             F    YG AL K ILFF+ QRSG LP+NQRV WRADS L DGK   V+L GGYYDAGD
Sbjct: 24  FAFAGHDYGQALTKGILFFEAQRSGYLPSNQRVKWRADSGLHDGKASGVDLVGGYYDAGD 83

Query: 84  NVKFGWPMSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTTFYTQ 142
           NVKFG PM++T++++SW+ +EY K++A+   LG+   A++WGT+YL+K+H      Y +
Sbjct: 84  NVKFGLPMAFTVTMMSWSIVEYGKQMAANGELGHAMEAVKWGTDYLIKAHPHPDVLYGE 142


>GSVIVT01012043001 assembled CDS
          Length = 615

 Score =  145 bits (365), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 72/141 (51%), Positives = 98/141 (69%), Gaps = 4/141 (2%)

Query: 3   SWVVVLLLAISQGGLAIQNQELCFKAS-SYGDALGKAILFFDGQRSGKLPANQRVSWRAD 61
           S+   L+LAI  G  A+   E    AS +YGDA+ K+++FF+ QRSGKLP NQRV WR D
Sbjct: 4   SFTHCLVLAIFLGLFAL---EATAGASFNYGDAMEKSLMFFEAQRSGKLPVNQRVKWRGD 60

Query: 62  SALSDGKPDNVNLTGGYYDAGDNVKFGWPMSYTLSLLSWAALEYQKEIASINLLGYLQNA 121
           S L DG    V+L GGYYDAGD+VKFG PM++T+++LSW A++Y+KEI  +N +G    A
Sbjct: 61  SGLRDGLLQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGAIDYRKEITGLNQMGDTLAA 120

Query: 122 IRWGTNYLLKSHTSSTTFYTQ 142
           I+WGT+Y +K+HT     + Q
Sbjct: 121 IKWGTDYFIKAHTEPDVLWGQ 141


>GSVIVT01032798001 assembled CDS
          Length = 462

 Score =  142 bits (358), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 64/115 (55%), Positives = 86/115 (74%)

Query: 28  ASSYGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVKF 87
           +S+YG AL K++L+F+ QRSGKLP NQRV WR DSAL DG    V+L GGYYDAGDNVKF
Sbjct: 22  SSNYGAALTKSLLYFEAQRSGKLPPNQRVLWRGDSALQDGNDAGVDLVGGYYDAGDNVKF 81

Query: 88  GWPMSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTTFYTQ 142
           G+P ++T++LLSW  +EY +++A+   LG+   AI+WGT+Y +K+HT     Y Q
Sbjct: 82  GFPHAFTVTLLSWGVIEYGQQLAAKKELGHAMEAIKWGTDYFIKAHTQPNVLYGQ 136


>GSVIVT01030494001 assembled CDS
          Length = 1179

 Score =  137 bits (346), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 60/116 (51%), Positives = 84/116 (72%)

Query: 27  KASSYGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVK 86
           +A +Y DAL K++L+F+ QRSG+LP NQRV WR  S L+DG    V+L GGYYDAGD+VK
Sbjct: 31  QAHNYTDALSKSLLYFEAQRSGRLPHNQRVVWRDHSGLTDGLEQGVDLVGGYYDAGDHVK 90

Query: 87  FGWPMSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTTFYTQ 142
           FG PM++T+++LSW  +EY+ EI S   L +   AI+WGT+Y +K+HTS    + +
Sbjct: 91  FGLPMAFTVTMLSWGVIEYRNEIGSAGELEHALEAIKWGTDYFIKAHTSPNVLWAE 146


>GSVIVT01035481001 assembled CDS
          Length = 972

 Score =  134 bits (338), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 94/141 (66%), Gaps = 4/141 (2%)

Query: 2   SSWVVVLLLAISQGGLAIQNQELCFKASSYGDALGKAILFFDGQRSGKLPANQRVSWRAD 61
           S+ + V  LA+ +G   + N        +Y DAL K+++F + QRSGKLPAN R+ WR D
Sbjct: 8   SAAIAVAWLALFEGFFGLVNG----SDINYKDALTKSLIFLEAQRSGKLPANNRLPWRGD 63

Query: 62  SALSDGKPDNVNLTGGYYDAGDNVKFGWPMSYTLSLLSWAALEYQKEIASINLLGYLQNA 121
           SAL DGK  N +L GGYYDAGDNVK+G PM++T++ LSW+A+ Y+ E+ +   L  +++A
Sbjct: 64  SALEDGKLVNADLVGGYYDAGDNVKYGLPMAFTVTTLSWSAIFYESELKATGELENMRDA 123

Query: 122 IRWGTNYLLKSHTSSTTFYTQ 142
           I+WGT+Y LK++      Y Q
Sbjct: 124 IKWGTDYFLKAYPRKNRLYVQ 144



 Score =  130 bits (327), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 59/113 (52%), Positives = 82/113 (72%)

Query: 30  SYGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVKFGW 89
           +Y +AL K+I+F + QRSGKLP   R++WR +SAL DGK  NV+L GGYYDAGDNVKFG 
Sbjct: 517 NYKEALTKSIIFLEAQRSGKLPPTSRLAWRGNSALDDGKLANVDLVGGYYDAGDNVKFGL 576

Query: 90  PMSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTTFYTQ 142
           PM++T++ LSWAA+ Y+ E+ +   L  ++ AI+WGT+Y LK+ +     Y Q
Sbjct: 577 PMAFTITTLSWAAIFYEAELGASEELENVRAAIKWGTDYFLKASSQKNRLYVQ 629


>GSVIVT01019664001 assembled CDS
          Length = 419

 Score =  133 bits (335), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/118 (54%), Positives = 88/118 (74%), Gaps = 3/118 (2%)

Query: 26  FKASSYGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNV 85
           F +  Y DAL K+ILF++GQRSGKLP++QR++WR DS LSDG   +V+L GGYYDAGDNV
Sbjct: 28  FTSKDYADALAKSILFYEGQRSGKLPSSQRLTWRGDSGLSDGSSYHVDLVGGYYDAGDNV 87

Query: 86  KFGWPMSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSST-TFYTQ 142
           KFG PM++T +LL+W+ +E+   + S   +G  + AIRW T+YLLK+ T++  T Y Q
Sbjct: 88  KFGLPMAFTTTLLAWSVIEFGNSMPS--QIGNARAAIRWSTDYLLKAATATPGTLYVQ 143


>GSVIVT01018619001 assembled CDS
          Length = 470

 Score =  131 bits (330), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 62/113 (54%), Positives = 86/113 (76%), Gaps = 2/113 (1%)

Query: 28  ASSYGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVKF 87
           + +Y DAL K+ILFF+GQRSG+LP +QR++WR DSAL+DG   NV+L GGYYDAGDNVKF
Sbjct: 8   SQNYEDALTKSILFFEGQRSGRLPPSQRMTWRKDSALNDGTESNVDLVGGYYDAGDNVKF 67

Query: 88  GWPMSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTTFY 140
            +PM++T +LL+W+ LE+ + + S   L Y  +AIRWGT+Y LK+ +   T +
Sbjct: 68  NFPMAFTTTLLAWSVLEFGQFMGSD--LQYALDAIRWGTDYFLKATSIPGTVF 118


>GSVIVT01018617001 assembled CDS
          Length = 486

 Score =  131 bits (329), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/108 (58%), Positives = 86/108 (79%), Gaps = 2/108 (1%)

Query: 31  YGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVKFGWP 90
           YGDAL K+ILFF+GQRSGKLP++QRV+WR DS ++DGK   V+LTGGYYDAGDNVKF +P
Sbjct: 26  YGDALTKSILFFEGQRSGKLPSSQRVNWRKDSGVNDGKDVKVDLTGGYYDAGDNVKFNFP 85

Query: 91  MSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTT 138
           M++T +LL+W+ +E+  +    +L   L +A+RWGT+YLLK+ T+  T
Sbjct: 86  MAFTTTLLAWSVIEF-GQFMDPDLQNAL-DAVRWGTDYLLKATTTPGT 131


>GSVIVT01032799001 assembled CDS
          Length = 483

 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 57/112 (50%), Positives = 81/112 (72%)

Query: 31  YGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVKFGWP 90
           YG AL K+IL+F+ QRSGKLP+NQR  WR DSAL DG    V+L GGYYDAGDNVKFG+P
Sbjct: 25  YGSALTKSILYFEAQRSGKLPSNQRAKWRGDSALKDGGDAGVDLVGGYYDAGDNVKFGFP 84

Query: 91  MSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTTFYTQ 142
            ++T+++LSW+ +++  ++++   L     AI+WGT+Y +K+H  +   Y Q
Sbjct: 85  QAFTVTMLSWSVIDFGSQLSAKKELDNALAAIKWGTDYFIKAHPQANVLYGQ 136


>GSVIVT01037709001 assembled CDS
          Length = 478

 Score =  129 bits (324), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 57/112 (50%), Positives = 79/112 (70%)

Query: 31  YGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVKFGWP 90
           Y  AL  ++L+F+ QRSG+LP NQRV+WR  S L+DG    V+L GGYYDAGDNVKFG P
Sbjct: 29  YHQALSNSLLYFETQRSGRLPHNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDNVKFGLP 88

Query: 91  MSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTTFYTQ 142
           M++T+++LSW  +EY + +AS    G+   AI+WGT+Y +K+HT     + Q
Sbjct: 89  MAFTVTMLSWGVIEYGQYMASAGEYGHALEAIKWGTDYFIKAHTQPNVLWVQ 140


>GSVIVT01024179001 assembled CDS
          Length = 473

 Score =  125 bits (313), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 61/115 (53%), Positives = 83/115 (72%), Gaps = 7/115 (6%)

Query: 31  YGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVKFGWP 90
           Y DAL K ILFF+GQRSG LP  QR+SWRA+S LSDG   +V+LTGGYYDAGDN+KFG+P
Sbjct: 29  YSDALSKCILFFEGQRSGFLPNGQRISWRANSGLSDGWQRSVDLTGGYYDAGDNIKFGFP 88

Query: 91  MSYTLSLLSWAALEYQKEIASINLLGYLQN---AIRWGTNYLLKSHTSSTTFYTQ 142
           M++T ++L+W+ +E+   + +    G L+N   AIRW T+YLLK+ +     + Q
Sbjct: 89  MAFTTTMLAWSVIEFGDSMPA----GELRNTMVAIRWATDYLLKTVSQPGRIFVQ 139


>GSVIVT01037210001 assembled CDS
          Length = 494

 Score =  124 bits (310), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/110 (55%), Positives = 79/110 (71%), Gaps = 8/110 (7%)

Query: 30  SYGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVKFGW 89
           +Y DAL K+ILFF GQRSG+LP  Q++SWR++S LSDG    V+LTGGYYDAGDNVKF +
Sbjct: 33  NYKDALAKSILFFQGQRSGRLPTGQQMSWRSNSGLSDGSLARVDLTGGYYDAGDNVKFNF 92

Query: 90  PMSYTLSLLSWAALEYQKEIASINLLGYLQN---AIRWGTNYLLKSHTSS 136
           PM++  ++LSW  LEY K +        LQN   AIRW T+YL+K  T++
Sbjct: 93  PMAFATTMLSWGTLEYGKRMGP-----QLQNSRAAIRWATDYLIKCATTT 137


>GSVIVT01018793001 assembled CDS
          Length = 526

 Score =  116 bits (291), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 79/115 (68%), Gaps = 1/115 (0%)

Query: 28  ASSYGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVKF 87
           A +Y DAL  AI FFD Q+SGKL  N ++ WR DS L DG+ + ++L+ G YDAGD++KF
Sbjct: 52  AENYADALKIAIQFFDIQKSGKL-VNNKIDWRGDSGLEDGREEMLDLSKGMYDAGDHMKF 110

Query: 88  GWPMSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTTFYTQ 142
           G+PM++T ++LSWA LEY   + ++  LG  Q +++W T+YL+ +H S    Y Q
Sbjct: 111 GFPMAFTATVLSWAILEYGDHMKAVKQLGNAQASLKWITDYLINAHPSPNLLYVQ 165


>GSVIVT01010049001 assembled CDS
          Length = 505

 Score =  112 bits (280), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 16/151 (10%)

Query: 6   VVLLLAISQGGLAIQNQELCFKASSYG------DALGKAILFFDGQRSGKLPANQRVSWR 59
           V L+LAI    L +    L  K   +G       A+ +A+ FF+ Q+SG LP N  VS+R
Sbjct: 85  VFLVLAIV--ALVVLLHFLPHKHGHHGSSKNLTHAINQALTFFEAQKSGYLPKNSSVSFR 142

Query: 60  ADSALSDGKPDNVNLTGGYYDAGDNVKFGWPMSYTLSLLSWAALEYQKEIASINLLGYLQ 119
            DS L DG     NL GG+YD+G+N+KF +P +YT++LLSW  +EY ++ A I  L +++
Sbjct: 143 GDSGLQDGNSSGHNLVGGFYDSGNNIKFSFPTAYTITLLSWTVIEYHQKYADIGELEHVK 202

Query: 120 NAIRWGTNYLLK--------SHTSSTTFYTQ 142
           + I+WG++YLLK        + +S+T  Y+Q
Sbjct: 203 DIIKWGSDYLLKLFIPPIKSTSSSTTILYSQ 233


>GSVIVT01009881001 assembled CDS
          Length = 525

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/112 (46%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 31  YGDALGKAILFFDGQRSGKLPANQRVSWRADSALSDGKPDNVNLTGGYYDAGDNVKFGWP 90
           Y DAL  A+ FFD Q+SGKL  N ++SWR +SAL DG    ++L+ G YDAGD++KFG+P
Sbjct: 55  YSDALKLAMQFFDIQKSGKL-ENNKISWRGNSALQDGSEAKLDLSKGMYDAGDHIKFGFP 113

Query: 91  MSYTLSLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTTFYTQ 142
           M++T ++LSWA LEY  ++  ++ L   Q++++W T+YL+ +H S    Y Q
Sbjct: 114 MAFTATVLSWAILEYGDQMDVVDQLEPAQDSLKWITDYLINAHPSENVLYIQ 165


>GSVIVT01023102001 assembled CDS
          Length = 501

 Score =  104 bits (260), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 70/101 (69%), Gaps = 4/101 (3%)

Query: 40  LFFDGQRSGKLPANQRVSWRADSALSDGKPDN----VNLTGGYYDAGDNVKFGWPMSYTL 95
           +FF+ QRSGKLP +  VSWR +S ++DGK +      +L GGYYDAGD +KF +PMS+ +
Sbjct: 1   MFFNAQRSGKLPKHNNVSWRGNSGMNDGKSETGSFYKDLVGGYYDAGDAIKFNFPMSFAM 60

Query: 96  SLLSWAALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSS 136
           ++LSW+ +EY  +  +   L +++  I+WGT+Y LK+  SS
Sbjct: 61  TMLSWSVIEYSAKYEAAGELNHVKEIIKWGTDYFLKTFNSS 101


>GSVIVT01006152001 assembled CDS
          Length = 191

 Score = 93.6 bits (231), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 69/98 (70%), Gaps = 3/98 (3%)

Query: 45  QRSGKLPANQRVSWRADSALSDGKP-DNVN--LTGGYYDAGDNVKFGWPMSYTLSLLSWA 101
           + SGKLP +  ++WR +S L DGK   +V   L GGYYDAGDN+KF +PM+Y +++LSW+
Sbjct: 26  KTSGKLPKSNGIAWRGNSGLEDGKDLTDVKGGLVGGYYDAGDNIKFHFPMAYAMTMLSWS 85

Query: 102 ALEYQKEIASINLLGYLQNAIRWGTNYLLKSHTSSTTF 139
            +EY+ +  +I+   ++++ I+WGT+YLL +  SS + 
Sbjct: 86  VIEYRHKYEAIDEYNHVRDLIKWGTDYLLLTFNSSASH 123


>GSVIVT01028042001 assembled CDS
          Length = 439

 Score = 92.4 bits (228), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 60/87 (68%), Gaps = 2/87 (2%)

Query: 56  VSWRADSALSDGKPDNVNLTGGYYDAGDNVKFGWPMSYTLSLLSWAALEYQKEIASINLL 115
           ++WR DS LSDG   +V+L GGYYDAGDNVKFG+PM++T ++LSW+ +E+   +     L
Sbjct: 1   MTWRRDSGLSDGAAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMK--GEL 58

Query: 116 GYLQNAIRWGTNYLLKSHTSSTTFYTQ 142
            + + AIRW T+YLLK+     T Y Q
Sbjct: 59  QHAKEAIRWATDYLLKATVHPDTIYVQ 85