Jatropha Genome Database
- JcCB0091031.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0091031.10 + phase: 0
(215 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01024562001 assembled CDS 242 1e-64
GSVIVT01032683001 assembled CDS 237 4e-63
GSVIVT01034897001 assembled CDS 147 4e-36
GSVIVT01024160001 assembled CDS 147 5e-36
GSVIVT01010836001 assembled CDS 144 4e-35
GSVIVT01009846001 assembled CDS 97 4e-21
GSVIVT01014246001 assembled CDS 81 4e-16
GSVIVT01020658001 assembled CDS 78 3e-15
GSVIVT01023292001 assembled CDS 62 3e-10
GSVIVT01001783001 assembled CDS 50 9e-07
GSVIVT01034617001 assembled CDS 48 3e-06
>GSVIVT01024562001 assembled CDS
Length = 219
Score = 242 bits (617), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/182 (72%), Positives = 149/182 (81%), Gaps = 7/182 (3%)
Query: 22 ANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQ 81
ANRQSAARSKERKARYI ELERKVQTLQTEATTLSAQLTL+QRDTTGLSTENTELKLRLQ
Sbjct: 28 ANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQ 87
Query: 82 AMEQQAQLRDALNEALKKEVERLKLATGEMMTPTDTYNLGMHHMPYTQSSFF-LPQSQTR 140
AMEQQAQLRDALN ALK+EVERLK+ATGE+M+P+++++LGM M YT SSF LPQ Q
Sbjct: 88 AMEQQAQLRDALNTALKQEVERLKIATGEIMSPSESFDLGMQQMLYTPSSFLSLPQ-QIG 146
Query: 141 IVNSQNMQMPQFHSFQSNMSTP-LQPMGGSSHSHAFPDMLQQDPLGRLQGLDISSRSTLV 199
NMQ+P FH SNMST LQP+ +S ++LQ DPLGRLQGLDISSR + +
Sbjct: 147 PAGQPNMQLPPFHHSHSNMSTQYLQPI----NSQPISEILQNDPLGRLQGLDISSRGSHL 202
Query: 200 VK 201
VK
Sbjct: 203 VK 204
>GSVIVT01032683001 assembled CDS
Length = 198
Score = 237 bits (604), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 135/180 (75%), Gaps = 35/180 (19%)
Query: 22 ANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQ 81
ANRQSAARSKERKARYI ELERKVQTLQTEATTLSAQLTLFQRDTTGL+TENTELKLRLQ
Sbjct: 39 ANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLTLFQRDTTGLTTENTELKLRLQ 98
Query: 82 AMEQQAQLRDALNEALKKEVERLKLATGEMMTPTDTYNLGMHHMPYTQSSFFLPQSQTRI 141
AMEQQAQLRDALNEALKKEVERLK+ATGE+MT +D YNLGMHH+PYTQSSFF QSQ
Sbjct: 99 AMEQQAQLRDALNEALKKEVERLKIATGEIMTSSDAYNLGMHHVPYTQSSFFSHQSQ--- 155
Query: 142 VNSQNMQMPQFHSFQSNMSTPLQPMGGSSHSHAFPDMLQQDPLGRLQGLDISSRSTLVVK 201
P+MLQQDPLGRLQGLDISSR +VK
Sbjct: 156 --------------------------------PGPNMLQQDPLGRLQGLDISSRGPSLVK 183
>GSVIVT01034897001 assembled CDS
Length = 195
Score = 147 bits (370), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 102/148 (68%), Gaps = 14/148 (9%)
Query: 22 ANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQ 81
ANRQSAARSKERK RY +ELERKVQTLQTEATTLSAQ+T+ QRDTTGL+ EN ELKLRLQ
Sbjct: 44 ANRQSAARSKERKIRYTNELERKVQTLQTEATTLSAQVTMLQRDTTGLTAENKELKLRLQ 103
Query: 82 AMEQQAQLRDALNEALKKEVERLKLATGEM-MTPTDTYNLG-----------MHHM--PY 127
AMEQQA LR+ALNEAL++EV+RLK+ATG++ +++N G +HH
Sbjct: 104 AMEQQASLREALNEALREEVQRLKIATGQIPAVNGNSFNRGLPPQFSSHPQALHHFGAQQ 163
Query: 128 TQSSFFLPQSQTRIVNSQNMQMPQFHSF 155
Q +PQS T + P F F
Sbjct: 164 QQQQLHMPQSSTNNQSLNGQPQPSFLDF 191
>GSVIVT01024160001 assembled CDS
Length = 369
Score = 147 bits (370), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/117 (68%), Positives = 90/117 (76%), Gaps = 9/117 (7%)
Query: 22 ANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQ 81
ANRQSAARSKERK RYISELE KVQTLQTEATTLSAQLTL QRD+ GL+++N ELK RLQ
Sbjct: 218 ANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTSQNNELKFRLQ 277
Query: 82 AMEQQAQLRDALNEALKKEVERLKLATGEM---------MTPTDTYNLGMHHMPYTQ 129
AMEQQAQLRDALNEAL EV+RLKLAT E+ + P + N M H+ + Q
Sbjct: 278 AMEQQAQLRDALNEALTAEVQRLKLATAELGGESQASKCLVPQLSVNPQMFHLHHQQ 334
>GSVIVT01010836001 assembled CDS
Length = 354
Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 99/139 (71%), Gaps = 8/139 (5%)
Query: 22 ANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQ 81
ANRQSAARSKERK RYI+ELERKVQTLQTEAT+LSAQLTL QRDT GL+ EN+ELKLRLQ
Sbjct: 156 ANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQ 215
Query: 82 AMEQQAQLRDALNEALKKEVERLKLATGEMMTPTDTYNLGMHHMP--YTQSSFFLPQSQT 139
MEQQ L+DALN+ALK+E++ LK+ TG+ M M + P Y + F P +Q
Sbjct: 216 TMEQQVNLQDALNDALKEEIQHLKVLTGQTM----PNGAPMMNFPQSYGTGAQFYPNNQA 271
Query: 140 --RIVNSQNMQMPQFHSFQ 156
++ +Q Q Q HS +
Sbjct: 272 MHTLLTAQQFQQLQIHSHK 290
>GSVIVT01009846001 assembled CDS
Length = 131
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 69/85 (81%)
Query: 22 ANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQ 81
ANRQSAARSKERK RY++ELE KV TLQTE TTLS LTL QRD+ L++ N ELKLR+Q
Sbjct: 22 ANRQSAARSKERKVRYMAELEHKVHTLQTETTTLSHLLTLLQRDSAELTSRNNELKLRIQ 81
Query: 82 AMEQQAQLRDALNEALKKEVERLKL 106
AMEQ+AQ RDAL EAL EV RL+L
Sbjct: 82 AMEQEAQFRDALKEALTLEVHRLQL 106
>GSVIVT01014246001 assembled CDS
Length = 309
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 22 ANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQ 81
ANRQSA RS+ RK +YISELER V +LQTE + LS ++ L+ +N+ LK R+
Sbjct: 180 ANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIA 239
Query: 82 AMEQQAQLRDALNEALKKEVERLK 105
A+ Q +DA EALKKE+ERL+
Sbjct: 240 ALAQDKIFKDAHQEALKKEIERLR 263
>GSVIVT01020658001 assembled CDS
Length = 295
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 56/84 (66%)
Query: 22 ANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQ 81
ANRQSA RS+ RK +YISELER V +LQTE + LS ++ L+ +N+ LK R+
Sbjct: 179 ANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPRVAFLDHQRLLLNVDNSALKQRIA 238
Query: 82 AMEQQAQLRDALNEALKKEVERLK 105
A+ Q +DA +ALK+E+ERL+
Sbjct: 239 ALAQDKIFKDAHQDALKREIERLR 262
>GSVIVT01023292001 assembled CDS
Length = 374
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 22 ANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQ 81
A +Q A RS+ RK +YI+ELER VQ L+ E + +SA+L + LS EN LK RL+
Sbjct: 234 AKQQFAQRSRVRKLQYIAELERNVQALKAEGSEVSAELDFLNQQNLILSMENKALKQRLE 293
Query: 82 AMEQQAQLRDALNEALKKEVERLK 105
++ Q+ ++ E L++E+ RL+
Sbjct: 294 SLAQEQLIKYLEQEVLEREIGRLR 317
>GSVIVT01001783001 assembled CDS
Length = 272
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 22 ANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQ 81
A +Q A RS+ RK +YI+ELE VQ LQ E +SA + + L +N L+ RL+
Sbjct: 145 AKQQFAQRSRLRKLQYIAELEMSVQVLQAEGCEISAAVEYLDQHNLILGMKNRALQQRLE 204
Query: 82 AMEQQAQLRDALNEALKKEVERLKL 106
+ Q+ ++ + L++E+ RL++
Sbjct: 205 SSSQEYLIKQLEQDMLEREIRRLQI 229
>GSVIVT01034617001 assembled CDS
Length = 308
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 24 RQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAM 83
R S RS+ RK +YI+ELER V QT + L+ ++ + LS EN++LK +L +
Sbjct: 186 RHSGQRSRVRKLQYIAELERTVDVYQTLESELAIRVASLLQLRVALSMENSKLKQQLAKL 245
Query: 84 EQQAQLRDALNEALKKEVERLK 105
+QQ + D +++L+KEVER+K
Sbjct: 246 QQQKLIMDGQHKSLRKEVERMK 267