Jatropha Genome Database

JcCB0075441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0075441.10 - phase: 0 /partial
         (471 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01011565001 assembled CDS                                       873   0.0  
GSVIVT01035247001 assembled CDS                                       858   0.0  
GSVIVT01000391001 assembled CDS                                       775   0.0  
GSVIVT01011564001 assembled CDS                                       718   0.0  
GSVIVT01010526001 assembled CDS                                        91   1e-18
GSVIVT01034903001 assembled CDS                                        54   1e-07

>GSVIVT01011565001 assembled CDS
          Length = 462

 Score =  873 bits (2255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/455 (90%), Positives = 437/455 (96%)

Query: 1   MVLSKIASESDVSVHSTFASRYVRESLPRYKMPENSIPKEAAFQIINDELMLDGKPRLNL 60
           MVLSK ASESDVSVHSTFASRYV+ SLPR+K+PENSIPKEAA+QIINDELMLDG PRLNL
Sbjct: 1   MVLSKTASESDVSVHSTFASRYVKASLPRFKLPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMDAMNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVG 120
           ASFVTTWMEPECDKL+M A+NKNYVDMDEYPVTTELQNRCVN+IAHLFNAPL +SEAAVG
Sbjct: 61  ASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIAHLFNAPLEDSEAAVG 120

Query: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 181 VKLSEGCYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKVTGWDTP 240
           VKL +G YVMDP KAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNK TGWDTP
Sbjct: 181 VKLRDGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKQTGWDTP 240

Query: 241 IHVDAASGGFIAPFLWPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPEEL 300
           IHVDAASGGFIAPFL+PELEWDFRLPLVKSINVSGHKYGLVYAG+GWV+WRSKEDLPEEL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRSKEDLPEEL 300

Query: 301 IFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGYEGYRNVMENCHQNAIVLKEGLEK 360
           IFHINYLG DQPTFTLNFSKGSSQ+IAQYYQLIRLG+EGYRNVMENC +NA+ LKEGLEK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCQENAMALKEGLEK 360

Query: 361 TGRFNIVSKDIGVPLVAFSLKDNSKHTEFEIADMLRRFGWIVPAYTMPADAQHITVLRVV 420
           TGRFNI+SKD GVPLVAFSLKDNS H EFE+ADMLRRFGWIVPAYTMP DAQH+TVLRVV
Sbjct: 361 TGRFNIISKDNGVPLVAFSLKDNSCHDEFEVADMLRRFGWIVPAYTMPPDAQHVTVLRVV 420

Query: 421 IREDFSRTLAERLVLDITKVLLELDMLPAKINAKL 455
           +REDFSRTLAERLV DITKVL ELDMLPAK++AK+
Sbjct: 421 VREDFSRTLAERLVFDITKVLHELDMLPAKLSAKI 455


>GSVIVT01035247001 assembled CDS
          Length = 488

 Score =  858 bits (2216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/466 (87%), Positives = 437/466 (93%), Gaps = 4/466 (0%)

Query: 1   MVLSKIASESDVSVHSTFASRYVRESLPRYKMPENSIPKEAAFQIINDELMLDGKPRLNL 60
           M LS+ ASES+ S+HSTFASRYVR SLPR+K+PENSIPKEAA+QIINDELMLDG PRLNL
Sbjct: 1   MALSETASESNASIHSTFASRYVRVSLPRFKIPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMDAMNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVG 120
           ASFVTTWMEPECDKLIM ++NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVG
Sbjct: 61  ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVG 120

Query: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKP+DKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPHDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 181 VKLSEGCYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKVTGWDTP 240
           VKL++G YVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVK LNDLL +KNK TGWDTP
Sbjct: 181 VKLTDGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKHLNDLLTKKNKETGWDTP 240

Query: 241 IHVDAASGGFIAPFLWPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPEEL 300
           IHVDAASGGFIAPFL PELEWDFRLPLVKSINVSGHKYGLVYAG+GWVIWRSKEDLP+EL
Sbjct: 241 IHVDAASGGFIAPFLHPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPDEL 300

Query: 301 IFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGYEGYRNVMENCHQNAIVLKEGLEK 360
           IFHINYLG DQPTFTLNFSKGSSQ+IAQYYQLIRLG+EGYRN+MENC +NA VLKEGLEK
Sbjct: 301 IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNIMENCQENARVLKEGLEK 360

Query: 361 TGRFNIVSKDIGVPLVAFSLKDNSKHTEFEIADMLRRFGWIVPAYTMPADAQHITVLRVV 420
           TG FNIVSK+ GVPLVAFSLKDNS H EFE++DMLRR+GWIVPAYTMP DAQH+TVLRVV
Sbjct: 361 TGHFNIVSKENGVPLVAFSLKDNSCHNEFEVSDMLRRYGWIVPAYTMPPDAQHVTVLRVV 420

Query: 421 IREDFSRTLAERLVLDITKVLLELDMLPAKINAKLIVAAEQNNGKN 466
           IREDFSRTLAERLV DI KVL ELD LPAKI AK+    +Q+N K+
Sbjct: 421 IREDFSRTLAERLVTDIQKVLYELDTLPAKITAKV----QQSNKKS 462


>GSVIVT01000391001 assembled CDS
          Length = 487

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/454 (80%), Positives = 407/454 (89%)

Query: 1   MVLSKIASESDVSVHSTFASRYVRESLPRYKMPENSIPKEAAFQIINDELMLDGKPRLNL 60
           MV+S   S+S   +H+TFASRYVR+ LP++KMPE SIPKEAAFQII+DELMLDG PRLNL
Sbjct: 1   MVISTTISDSSEHLHATFASRYVRDPLPKFKMPERSIPKEAAFQIISDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMDAMNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVG 120
           ASFVTTWME ECDKLIM ++NKNYVDMDEYP+     NRCVNMIAHLFNAP+GE+E A+G
Sbjct: 61  ASFVTTWMEEECDKLIMASVNKNYVDMDEYPLVGPHHNRCVNMIAHLFNAPVGENETAIG 120

Query: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIMLAGLAFKRKWQ KRK+EGKPYDKPNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQQKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 181 VKLSEGCYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKVTGWDTP 240
           VKL EG YVMDPVKAVEMVDENTICVAAILGSTL GEFEDVKLLN+LL +KN  TGW TP
Sbjct: 181 VKLREGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTKKNTETGWGTP 240

Query: 241 IHVDAASGGFIAPFLWPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPEEL 300
           IHVDAASGGFIAPFL P+LEWDFRLPLVKSINVSGHKYGLVYAGVGWV+WR+K+DLPEEL
Sbjct: 241 IHVDAASGGFIAPFLHPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPEEL 300

Query: 301 IFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGYEGYRNVMENCHQNAIVLKEGLEK 360
           IFHINYLG+DQPTFTLNFSKGSSQIIAQYYQ IRLG+EGY+N+M NC  NA VLK+GL +
Sbjct: 301 IFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMTNCMDNANVLKQGLVE 360

Query: 361 TGRFNIVSKDIGVPLVAFSLKDNSKHTEFEIADMLRRFGWIVPAYTMPADAQHITVLRVV 420
           TGRF IVSKDIGVPLVAFSLKD S +T F+I++ LRR+GWI+PAYTMP DA+HI VLRVV
Sbjct: 361 TGRFEIVSKDIGVPLVAFSLKDTSNYTVFDISNNLRRYGWIIPAYTMPPDAEHIAVLRVV 420

Query: 421 IREDFSRTLAERLVLDITKVLLELDMLPAKINAK 454
           +REDFSR+LAERL+ DI KV+ E+D + ++   +
Sbjct: 421 VREDFSRSLAERLLSDIEKVMREMDAVQSRATTR 454


>GSVIVT01011564001 assembled CDS
          Length = 567

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/429 (78%), Positives = 384/429 (89%), Gaps = 2/429 (0%)

Query: 18  FASRYVRESLPRYKMPENSIPKEAAFQIINDELMLDGKPRLNLASFVTTWMEPECDKLIM 77
           FASRYV++  PRYKMPE SIPKEAA+QI++DEL+LDG PRLNLA+FVTTWMEPECDKL+ 
Sbjct: 21  FASRYVQDPPPRYKMPEKSIPKEAAYQIVHDELLLDGLPRLNLATFVTTWMEPECDKLMA 80

Query: 78  DAMNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLG-ESEAAVGVGTVGSSEAIMLAGLA 136
           +A+NKNYVDMDEYPVTTELQNRCVNMIA LFNAP   +++ AVGVGTVGSSEA+MLAGLA
Sbjct: 81  EAINKNYVDMDEYPVTTELQNRCVNMIAKLFNAPSADQTKQAVGVGTVGSSEAMMLAGLA 140

Query: 137 FKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGCYVMDPVKAV 196
           FK+KWQNKRKA+ KP+DKPNIVTGANVQVCWEKFARYFEVELKEVKL EG YVMDPVKAV
Sbjct: 141 FKKKWQNKRKAQKKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPVKAV 200

Query: 197 EMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKVTGWDTPIHVDAASGGFIAPFLW 256
           EMVDENTICVAAILGST NGEFEDVKLLN LL +KNK TGWDTPIHVDAASGGF+APFL+
Sbjct: 201 EMVDENTICVAAILGSTFNGEFEDVKLLNTLLTQKNKRTGWDTPIHVDAASGGFVAPFLY 260

Query: 257 PELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPEELIFHINYLGTDQPTFTL 316
           PELEWDFRLPLVKSINVSGHKYGLVYAGVGW IWRSKE+LPEELIFHINYLG D+PTFTL
Sbjct: 261 PELEWDFRLPLVKSINVSGHKYGLVYAGVGWAIWRSKEELPEELIFHINYLGGDEPTFTL 320

Query: 317 NFSKGSSQIIAQYYQLIRLGYEGYRNVMENCHQNAIVLKEGLEKTGRFNIVSKDIGVPLV 376
           NFSKGSSQ+IAQYYQ +R+G+EGY+ VM NC ++A +L+EGLEKTGRF I+SK+ GVP+V
Sbjct: 321 NFSKGSSQVIAQYYQFLRMGFEGYKKVMSNCMESARILREGLEKTGRFQIISKEKGVPVV 380

Query: 377 AFSLKDNS-KHTEFEIADMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVL 435
           AF+ K N  K+  F ++  LR +GWIVPAYTMPA+A+++TVLRVV+REDF R L E+L+ 
Sbjct: 381 AFAFKGNDRKNLAFGLSKALRNYGWIVPAYTMPANAENVTVLRVVVREDFGRQLVEKLLF 440

Query: 436 DITKVLLEL 444
            I   L E+
Sbjct: 441 HIGVALKEV 449


>GSVIVT01010526001 assembled CDS
          Length = 529

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 162/360 (45%), Gaps = 24/360 (6%)

Query: 81  NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAV-GVGTVGSSEAIMLAGLAFKR 139
           + N + MD +      +   V M A L  +    S   + G  T G +E+I+LA +   R
Sbjct: 145 HTNPLHMDVFQSVVRFEVEVVAMTAALLGSKEKASGGQICGNMTSGGTESILLA-VKTSR 203

Query: 140 KWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGCYVMDPVKAVEMV 199
            +   ++       +P ++   +    ++K A+YF ++L  V +++  +  D       +
Sbjct: 204 DYMKAKRG----ITRPEMIIPESAHSAYDKAAQYFNIKLLRVPVNKE-FQADVKGIRRHI 258

Query: 200 DENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKVTGWDTPIHVDAASGGFIAPFL---- 255
           ++NTI +        +G  + ++ L +L       + +    HVD   GGF+ PF     
Sbjct: 259 NKNTILIVGSAPGFPHGIIDPIEELGEL------ASSFGICFHVDLCLGGFVLPFARKLG 312

Query: 256 WPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPEELIFHINYLGTDQPTFT 315
           +P   +DF +  V SI+V  HKYGL   G   V++R+ +    + +    + G    + T
Sbjct: 313 YPIPPFDFSVEGVTSISVDVHKYGLAPKGTSVVLYRNHDIRKHQFVAVTEWSGGLYVSPT 372

Query: 316 LNFSKGSSQIIAQYYQLIRLGYEGYRNVMENCHQNAIVLKEGLEKTGRFNIVSKDIGVPL 375
           +  S+  + I   +  +I LG EGY N      + +  L+ G++      ++ +   + +
Sbjct: 373 IAGSRPGALIAGAWAAMISLGQEGYLNNTRETMEVSKKLQRGIKDIPELFVIGRP-DMTI 431

Query: 376 VAFSLKDNSKHTEFEIADMLRRFGWIVPAYTMPADAQHI--TVLRVVIREDFSRTLAERL 433
           VAF    ++    FE+ D+L   GW + A   P ++ HI  T+  V I EDF + L E +
Sbjct: 432 VAFG---SNVVDIFEVNDILSSKGWHLNALQRP-NSIHICLTLQHVTILEDFLKDLKESV 487


>GSVIVT01034903001 assembled CDS
          Length = 438

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 6/153 (3%)

Query: 210 LGSTLNGEFEDVKLLNDLLVEKNKVTGWDTPIHVDAASGGFIAPFLWPELEWDFRLPLVK 269
           +G+T+ G  +D+ L+ + L E+   T     IH D A  G + PF+    +  F+ P + 
Sbjct: 204 IGTTVKGAVDDLDLVIETL-EECGFTHDRFYIHCDGALFGLMMPFVKRAPKVTFKKP-IG 261

Query: 270 SINVSGHKYGLVYAGVGWVIWRSKEDLPEELIFHINYLGTDQPTFTLNFSKGSSQIIAQY 329
           S++VSGHK+       G  I R +      L  ++ YL +   T  +  S+     I  +
Sbjct: 262 SVSVSGHKFVGCPMPCGVQITRMEH--INALSRNVEYLASRDAT--IMGSRNGHAPIFLW 317

Query: 330 YQLIRLGYEGYRNVMENCHQNAIVLKEGLEKTG 362
           Y L R GY+G++  ++ C +NA  LK+ L   G
Sbjct: 318 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLRDAG 350