Jatropha Genome Database

JcCB0075281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0075281.10 - phase: 0 
         (162 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01026430001 assembled CDS                                       210   2e-55
GSVIVT01026431001 assembled CDS                                       207   2e-54
GSVIVT01026429001 assembled CDS                                       197   2e-51
GSVIVT01022301001 assembled CDS                                       166   4e-42
GSVIVT01026433001 assembled CDS                                       150   3e-37
GSVIVT01022629001 assembled CDS                                       125   1e-29
GSVIVT01026427001 assembled CDS                                       124   2e-29
GSVIVT01029853001 assembled CDS                                        96   8e-21
GSVIVT01011783001 assembled CDS                                        95   1e-20
GSVIVT01030905001 assembled CDS                                        90   5e-19
GSVIVT01026428001 assembled CDS                                        78   1e-15
GSVIVT01026434001 assembled CDS                                        51   3e-07

>GSVIVT01026430001 assembled CDS
          Length = 391

 Score =  210 bits (535), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 100/159 (62%), Positives = 127/159 (79%)

Query: 1   MALLDLFIASSIPVLKVLMITGLGTFLALDRVDILKGDARKHVNNVVFYVFSPALVGTKL 60
           M LLDLF  +S+PV++VL++T LG+FLALDR+DIL    RK +N VVF+VF+PALV + L
Sbjct: 1   MGLLDLFFVASMPVIRVLLLTALGSFLALDRIDILGDVVRKQLNTVVFFVFNPALVYSNL 60

Query: 61  AETITYESIVKMWFMPLNILITFIIGSMLGWILVQLTRPPSHLRGLIVGCCAAGNLGNML 120
           A TIT + +V +WFMPLNIL   IIGS LG +LV+ TR P HL+GLI+G CAAGN+GNM 
Sbjct: 61  ANTITLDRMVLLWFMPLNILTVCIIGSALGLLLVKTTRAPQHLKGLILGSCAAGNMGNMP 120

Query: 121 LIMIPAICKEKGSPFGAPDVCQSYGLAYVSLSMAVYMRC 159
           LI+IPA+C+EKGSPFGAPDVC ++ +AY SLSMA+   C
Sbjct: 121 LIIIPAVCREKGSPFGAPDVCHTFAMAYASLSMAIGAIC 159


>GSVIVT01026431001 assembled CDS
          Length = 418

 Score =  207 bits (526), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 90/155 (58%), Positives = 130/155 (83%), Gaps = 1/155 (0%)

Query: 1   MALLDLFIASSIPVLKVLMITGLGTFLALDRVDILKGDARKHVNNVVFYVFSPALVGTKL 60
           M  L LF+ + +P+LKVL++TG+G  +AL+R+D+L  +AR+++N +VFYVF+PALV + L
Sbjct: 1   MGFLSLFVVALVPILKVLLVTGVGLLIALERIDLLGANARRNLNAIVFYVFNPALVSSNL 60

Query: 61  AETITYESIVKMWFMPLNILITFIIGSMLGWILVQLTRPPSHLRGLIVGCCAAGNLGNML 120
           A+TIT+ S+V MWFMP+NIL+TF+IGS LGW+L+++TR P HL+GL++GCC+AGNLGN+L
Sbjct: 61  AKTITFSSLVTMWFMPVNILLTFVIGSALGWVLIKITRTPQHLQGLVLGCCSAGNLGNLL 120

Query: 121 LIMIPAICKEKGSPFGAPDVCQSYGLAYVSLSMAV 155
           LI+IPAIC+E+ +PFG  D C + G AY SLS+A+
Sbjct: 121 LIIIPAICEEEDNPFGDSD-CSTNGEAYASLSLAI 154


>GSVIVT01026429001 assembled CDS
          Length = 459

 Score =  197 bits (500), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 90/155 (58%), Positives = 115/155 (74%), Gaps = 3/155 (1%)

Query: 1   MALLDLFIASSIPVLKVLMITGLGTFLALDRVDILKGDARKHVNNVVFYVFSPALVGTKL 60
           M LLDLF  +S+PV+KVL++T +G+F+ALDR DI   + RK +N +VF+           
Sbjct: 44  MGLLDLFFVASMPVIKVLLVTAVGSFIALDRFDIFGENVRKQLNTIVFFX---XXXXXXX 100

Query: 61  AETITYESIVKMWFMPLNILITFIIGSMLGWILVQLTRPPSHLRGLIVGCCAAGNLGNML 120
                      MWFMP NILITF+IGS LGW+LV+LTR P HLRGL++GCCAAGNLGN+ 
Sbjct: 101 XXXXXGGGGGLMWFMPFNILITFVIGSALGWLLVKLTRAPQHLRGLVLGCCAAGNLGNLP 160

Query: 121 LIMIPAICKEKGSPFGAPDVCQSYGLAYVSLSMAV 155
           LI++PA+C+EKGSPFGAPDVC +YG+AY SLSMA+
Sbjct: 161 LIIVPAVCREKGSPFGAPDVCHTYGMAYASLSMAI 195


>GSVIVT01022301001 assembled CDS
          Length = 421

 Score =  166 bits (420), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 77/155 (49%), Positives = 111/155 (71%)

Query: 1   MALLDLFIASSIPVLKVLMITGLGTFLALDRVDILKGDARKHVNNVVFYVFSPALVGTKL 60
           M    LF  +S+P+L+VL+I  +G FLA    +IL  DARK VN +VF  F+P+L+   L
Sbjct: 1   MGFWTLFEVASMPILQVLIIGSVGAFLATGYCNILPADARKSVNKIVFVAFTPSLMFAGL 60

Query: 61  AETITYESIVKMWFMPLNILITFIIGSMLGWILVQLTRPPSHLRGLIVGCCAAGNLGNML 120
           A+T+T + ++  WFMP+NI +TF+ G +LGW++V++ +P  HL GLI+  C++GNLGN+L
Sbjct: 61  AQTVTLQDMISWWFMPVNIGLTFLFGGILGWLVVKILKPKQHLEGLIMATCSSGNLGNLL 120

Query: 121 LIMIPAICKEKGSPFGAPDVCQSYGLAYVSLSMAV 155
           LI+IPAIC+E GSPFG    C + GL+Y SLS A+
Sbjct: 121 LIVIPAICEEDGSPFGDHASCGASGLSYASLSTAL 155


>GSVIVT01026433001 assembled CDS
          Length = 379

 Score =  150 bits (379), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 88/110 (80%), Gaps = 1/110 (0%)

Query: 46  VVFYVFSPALVGTKLAETITYESIVKMWFMPLNILITFIIGSMLGWILVQLTRPPSHLRG 105
           +VFY+F PALV + LA+T+T  S+  MWFMP+NIL+TFIIGS LGWIL+++TRPP HL  
Sbjct: 7   LVFYIFYPALVASNLADTVTASSLATMWFMPVNILLTFIIGSALGWILIKITRPPQHLHA 66

Query: 106 LIVGCCAAGNLGNMLLIMIPAICKEKGSPFGAPDVCQSYGLAYVSLSMAV 155
           LI+GCC+AGN+GN+  I+IPAIC+E  +PFG+ D C + G AY SLS A+
Sbjct: 67  LILGCCSAGNMGNLFFIIIPAICEESDNPFGSSD-CSTDGDAYASLSSAL 115


>GSVIVT01022629001 assembled CDS
          Length = 194

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 53/93 (56%), Positives = 73/93 (78%)

Query: 45  NVVFYVFSPALVGTKLAETITYESIVKMWFMPLNILITFIIGSMLGWILVQLTRPPSHLR 104
           ++VFY+F PALV + L +T+T  S+  MW M +NIL+TFIIG  LGWIL+++TRPP HL 
Sbjct: 72  SLVFYIFYPALVASNLGDTVTASSLATMWLMLVNILLTFIIGLALGWILIKITRPPQHLH 131

Query: 105 GLIVGCCAAGNLGNMLLIMIPAICKEKGSPFGA 137
            LI+GCC+AGN+GN+  I+IP IC+E  +PFG+
Sbjct: 132 ALILGCCSAGNMGNLFFIIIPTICEESNNPFGS 164


>GSVIVT01026427001 assembled CDS
          Length = 133

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 56/81 (69%), Positives = 68/81 (83%)

Query: 75  MPLNILITFIIGSMLGWILVQLTRPPSHLRGLIVGCCAAGNLGNMLLIMIPAICKEKGSP 134
           MPLNIL TFIIGS LGW+L + TR P  LRGL++GCCAAGNLGN++LI+IPA+C+EKGSP
Sbjct: 1   MPLNILTTFIIGSALGWMLRKTTRAPQELRGLVLGCCAAGNLGNLILIIIPAVCREKGSP 60

Query: 135 FGAPDVCQSYGLAYVSLSMAV 155
           FGA D+C  +GL Y S SMA+
Sbjct: 61  FGAVDICCRHGLTYASPSMAI 81


>GSVIVT01029853001 assembled CDS
          Length = 376

 Score = 95.9 bits (237), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 78/133 (58%)

Query: 23  LGTFLALDRVDILKGDARKHVNNVVFYVFSPALVGTKLAETITYESIVKMWFMPLNILIT 82
           LG  +A   V+IL    RK +N +VF +  P L+ ++L + +T + +++ WF+P+N++  
Sbjct: 4   LGFLMASKYVNILPASGRKLLNGLVFSLLLPCLIFSQLGQAVTLQKMIEWWFIPINVICG 63

Query: 83  FIIGSMLGWILVQLTRPPSHLRGLIVGCCAAGNLGNMLLIMIPAICKEKGSPFGAPDVCQ 142
            I GS++G ++  + RPP       V     GN+GN+ L+++ A+C+++ +PFG  D C 
Sbjct: 64  TIAGSLIGLVVATIIRPPYPFFKFTVIHVGIGNIGNVPLVLLTALCRDQNNPFGDVDTCT 123

Query: 143 SYGLAYVSLSMAV 155
             G AY+S    V
Sbjct: 124 KQGTAYISFGQWV 136


>GSVIVT01011783001 assembled CDS
          Length = 406

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 88/148 (59%), Gaps = 2/148 (1%)

Query: 8   IASSIPVLKVLMITGLGTFLALDRVDILKGDARKHVNNVVFYVFSPALVGTKLAETITYE 67
           +++ +P+LK+L +T +G  LA  +  ++     K ++ +VF +F P L+ T L + IT E
Sbjct: 9   VSAVVPLLKLLSLTVIGLVLAHPKTQMIPRSTFKLLSKLVFALFLPCLIFTNLGQFITLE 68

Query: 68  SIVKMWFMPLNILITFIIGSMLGWILVQLTRPPSHLRGLIVGCCAAGNLGNMLLIMIPAI 127
           +    WF+P+N+L++ +IG  LG+++V + RPP+      +     GN GN+ L ++ ++
Sbjct: 69  NFTFWWFVPVNVLVSTLIGCFLGYLVVIICRPPAQFNRFTIIMTGLGNTGNLPLAIVGSV 128

Query: 128 CKEKGSPFGAPDVCQSYGLAYVSLSMAV 155
           C    +PFG PD C   G+AYVS +  V
Sbjct: 129 CHTANNPFG-PD-CYGKGVAYVSFAQWV 154


>GSVIVT01030905001 assembled CDS
          Length = 442

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 91/149 (61%), Gaps = 2/149 (1%)

Query: 7   FIASSIPVLKVLMITGLGTFLALDRVDILKGDARKHVNNVVFYVFSPALVGTKLAETITY 66
           ++++ +P++K+L +  +G  LA  ++ ++     + ++ +VF +F P L+ T L ++IT 
Sbjct: 48  WLSAVVPLMKLLSLAVIGLILAHPKLQVMSKATFRLLSKLVFVLFLPCLIFTHLGQSITG 107

Query: 67  ESIVKMWFMPLNILITFIIGSMLGWILVQLTRPPSHLRGLIVGCCAAGNLGNMLLIMIPA 126
           ++ V  WF+P+N++I+  +G +LG+++  + RPP       +   A GN GN+ L ++ +
Sbjct: 108 KNFVLWWFIPVNVIISTAVGCILGYLVAIICRPPPEFFRFTIIMTAFGNTGNLPLAIVGS 167

Query: 127 ICKEKGSPFGAPDVCQSYGLAYVSLSMAV 155
           +C    +PFG PD C + G++YVS +  V
Sbjct: 168 VCHSAKNPFG-PD-CHTSGVSYVSFAQWV 194


>GSVIVT01026428001 assembled CDS
          Length = 78

 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 62/74 (83%)

Query: 1  MALLDLFIASSIPVLKVLMITGLGTFLALDRVDILKGDARKHVNNVVFYVFSPALVGTKL 60
          M LLDLF+A+ +PVLKVL++T +G+ LA+DR+ IL  DARKH+N+VVF+VF+P+LV + L
Sbjct: 1  MGLLDLFVAALVPVLKVLLLTAVGSLLAIDRIGILGEDARKHLNSVVFFVFNPSLVASSL 60

Query: 61 AETITYESIVKMWF 74
          AE++T++S+V   F
Sbjct: 61 AESMTFKSMVMFSF 74


>GSVIVT01026434001 assembled CDS
          Length = 66

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 33/45 (73%)

Query: 1  MALLDLFIASSIPVLKVLMITGLGTFLALDRVDILKGDARKHVNN 45
          M    LF+ + +P+LKVL++TG+G F+AL+R+D+L   AR H+N 
Sbjct: 1  MGFWSLFVTALMPILKVLVVTGIGLFIALERIDLLGPTARHHLNT 45