Jatropha Genome Database
- JcCB0066151.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0066151.10 - phase: 0 /pseudo
(231 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01021274001 assembled CDS 292 9e-80
GSVIVT01030857001 assembled CDS 179 1e-45
GSVIVT01011407001 assembled CDS 139 8e-34
GSVIVT01034224001 assembled CDS 132 1e-31
GSVIVT01019729001 assembled CDS 123 6e-29
GSVIVT01017896001 assembled CDS 95 3e-20
GSVIVT01035178001 assembled CDS 91 6e-19
GSVIVT01004855001 assembled CDS 86 2e-17
GSVIVT01004850001 assembled CDS 84 4e-17
GSVIVT01004718001 assembled CDS 53 1e-07
GSVIVT01035640001 assembled CDS 52 2e-07
>GSVIVT01021274001 assembled CDS
Length = 282
Score = 292 bits (747), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 168/210 (80%), Gaps = 4/210 (1%)
Query: 1 MGEIAGSNGK-QVVLDVKD---DNNPPPCPSKHKEDSALSISVPFMQKMIAEVAGTYFLI 56
MGEI+G+NG +V L++KD ++NPPP + K+ S S S PF+QK+IAEV GTYFLI
Sbjct: 1 MGEISGANGNHEVSLNIKDSDANHNPPPPSTATKQGSTSSFSFPFVQKLIAEVLGTYFLI 60
Query: 57 FAGCTAVAVNLNFDKVVTHPGISIVWGLAVMVLVYSVGHISGAHFNPAVTLAFATCKRFP 116
FAGC AV VN + D VVT PGISIVWGL VMV+VYSVGHISGAHFNPAVT+AFATCKRFP
Sbjct: 61 FAGCAAVVVNSDKDSVVTLPGISIVWGLVVMVMVYSVGHISGAHFNPAVTIAFATCKRFP 120
Query: 117 WKQVPAYIVCQVIGSTLAAGTIRLIFTGKQDHFVGTMPAGSNMQSFVVEFIITFYLMFVI 176
WKQVPAY+V QVIGSTLA+GT+RLIF GKQDHF GT+PAGS++QSFV+EFIITFYLMFVI
Sbjct: 121 WKQVPAYVVAQVIGSTLASGTLRLIFNGKQDHFPGTLPAGSDLQSFVIEFIITFYLMFVI 180
Query: 177 SGVATDNRAIXXXXXXXXXXXXXXXXIFAG 206
SGVATDNRAI +FAG
Sbjct: 181 SGVATDNRAIGELAGLAVGATVLLNVMFAG 210
>GSVIVT01030857001 assembled CDS
Length = 466
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Query: 39 VPFMQKMIAEVAGTYFLIFAGCTAVAVNLNFDKVVTHPGISIVWGLAVMVLVYSVGHISG 98
V QK+IAEV GTYF++FAGC +VAVN + V T PG++ WGL V+V++Y++GHISG
Sbjct: 40 VTITQKVIAEVIGTYFVVFAGCGSVAVNGIYGSV-TFPGVAATWGLIVLVMIYALGHISG 98
Query: 99 AHFNPAVTLAFATCKRFPWKQVPAYIVCQVIGSTLAAGTIRLIFTGKQDHFVGTMPAGSN 158
AHFNPAVT+ FA +RFP+ QVP YI+ Q++GS LA+GT+ +F ++ + GT+PAGS+
Sbjct: 99 AHFNPAVTITFAILRRFPYWQVPLYIIGQLMGSILASGTLSFMFNIDREAYFGTVPAGSH 158
Query: 159 MQSFVVEFIITFYLMFVISGVATDNRA 185
QS V+E IITF LMFVISGVATD+RA
Sbjct: 159 GQSLVLEIIITFLLMFVISGVATDSRA 185
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
Query: 24 PCPSKHKEDSAL---SISVPFMQKMIAEVAGTYFLIFAGCTAVAVNLNFDKVVTHPGISI 80
P K S L S SVP ++++ E+ GTY LIF GC ++ VN + +V T GI++
Sbjct: 258 PLSELTKTSSLLRTISKSVP-RKQLLVEMIGTYILIFMGCGSMVVNKIYGQV-TLLGIAM 315
Query: 81 VWGLAVMVLVYSVGHISGAHFNPAVTLAFATCKRFPWKQVPAYIVCQVIGSTLA 134
WGL +MV+VYS+GH+SGAHFNP++T+AF P+ QVP YI Q+IGS LA
Sbjct: 316 TWGLTIMVIVYSIGHVSGAHFNPSITIAFFMVGHLPYPQVPLYITAQLIGSLLA 369
>GSVIVT01011407001 assembled CDS
Length = 294
Score = 139 bits (351), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 101/147 (68%), Gaps = 3/147 (2%)
Query: 41 FMQKMIAEVAGTYFLIFAGCTAVAVNLNFDKVVTHPGISIVWGLAVMVLVYSVGHISGAH 100
F++K++AEV TY L+F C + A++ + ++ V+ G S+ GL V ++Y+VGHISGAH
Sbjct: 46 FLRKVVAEVIATYLLVFVTCGSAALSASDEQRVSKLGASVAGGLIVTAMIYAVGHISGAH 105
Query: 101 FNPAVTLAFATCKRFPWKQVPAYIVCQVIGSTLAAGTIR-LIFTGKQDHFVGTMPAGSNM 159
NPAVTLAFA + FPWKQVP Y Q+ G+ AA T+R L++ K H T P+G+ +
Sbjct: 106 MNPAVTLAFAAVRHFPWKQVPLYAAAQLTGAIGAAFTLRELLYPIK--HLGTTTPSGTEI 163
Query: 160 QSFVVEFIITFYLMFVISGVATDNRAI 186
Q+ V+E ++TF +MF+ S VATD +AI
Sbjct: 164 QALVMEIVVTFSMMFITSAVATDTKAI 190
>GSVIVT01034224001 assembled CDS
Length = 354
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
Query: 37 ISVPFMQKMIAEVAGTYFLIFAGCTAVAVNLNFDKVVTHPGISIVWGLAVMVLVYSVGHI 96
+ V +KM AE GT+ LIF G VN T G++ GLAVMV++ S GHI
Sbjct: 73 LPVSLARKMGAEFIGTFMLIFGGAATGIVNQKTQGSETLLGLAASTGLAVMVIILSTGHI 132
Query: 97 SGAHFNPAVTLAFATCKRFPWKQVPAYIVCQVIGSTLAAGTIRLIFTGKQDHFVGTMP-- 154
SGAH NPAVT+AFA + FPWK VP YI Q++GS AA ++ IF D V T+P
Sbjct: 133 SGAHLNPAVTIAFAALRHFPWKHVPVYIGSQLMGSLCAAFALKGIFNPVMDGGV-TVPSH 191
Query: 155 AGSNMQSFVVEFIITFYLMFVISGVATDNRAI 186
+G+ Q+F +EFII+F+LMFV++ VATD RA+
Sbjct: 192 SGAYGQAFALEFIISFFLMFVVTAVATDTRAV 223
>GSVIVT01019729001 assembled CDS
Length = 298
Score = 123 bits (309), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 24 PCPSKHKEDSALSISVPFMQKMIAEVAGTYFLIFAGCTAVAVNLNFDKVVTHPGISIVWG 83
P P+ + A +S+ +K+ AE GT+ LIFA VN + V T G + G
Sbjct: 55 PSPTCFTDFPAPDVSL--TRKLGAEFVGTFILIFAATAGPIVNQKYSGVETLIGNAACAG 112
Query: 84 LAVMVLVYSVGHISGAHFNPAVTLAFATCKRFPWKQVPAYIVCQVIGSTLAAGTIRLIFT 143
LAVM+++ S GHISGAH NP++T+AFA + FPW QVPAYI QV S A+ ++ +F
Sbjct: 113 LAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKAVFH 172
Query: 144 GKQDHFVGTMPAGSNMQSFVVEFIITFYLMFVISGVATDNRAI 186
V T+P+ S Q+F +EF+ITF L+FV++ VATD RA+
Sbjct: 173 PFMSGGV-TVPSVSIGQAFALEFLITFNLLFVVTAVATDTRAV 214
>GSVIVT01017896001 assembled CDS
Length = 293
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Query: 43 QKMIAEVAGTYFLIFAGCTAVAVNLNFDKVVTHPGISIVWGLAVMVLVYSVGHISGAHFN 102
+ ++AE+ GT+ L+F AV V ++ GL V+VLV+S+G ISGAH N
Sbjct: 62 RMILAEMVGTFILVFCVYGIEAVTQLMKGEVGLLEYAVTGGLTVVVLVFSIGSISGAHVN 121
Query: 103 PAVTLAFATCKRFPWKQVPAYIVCQVIGSTLAAGTIRLIFTGKQDHFVGTMPAGSNMQSF 162
P+VT+ FAT +FPW +VP YI Q++GS LA R I+ G + + T P +F
Sbjct: 122 PSVTITFATLCQFPWSKVPYYISAQIVGSVLATYVGRSIY-GIKPELITTKPLQGCSSAF 180
Query: 163 VVEFIITFYLMFVISGVATDNRAI 186
VEFI TF +MF+ + + +++
Sbjct: 181 WVEFIATFIIMFLAVSLTSQPQSV 204
>GSVIVT01035178001 assembled CDS
Length = 187
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 74/117 (63%), Gaps = 13/117 (11%)
Query: 77 GISIVWGLAVMVLVYSVGHISGAHFNPAVTLAFATCKRFPWKQVPA----YIVCQVIGST 132
GI++ WG+ VMV++Y++GH+SG HFNPAVT+AFA ++FPW+Q + C+
Sbjct: 2 GIAVGWGMIVMVMIYTLGHVSGGHFNPAVTIAFAASRKFPWRQASILSSFFNCCE--HRI 59
Query: 133 LAAGTIRLIFTGKQ---DHFVGTMPAGSNMQSFVVEFIITFYLMFVISGVATDNRAI 186
+A+ ++ + T K D F T + ++F EFII+F LM I GVATD+RAI
Sbjct: 60 VASCSVSICCTRKHWPPDFFQST----TIPEAFTWEFIISFILMLAIYGVATDSRAI 112
>GSVIVT01004855001 assembled CDS
Length = 181
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 69/111 (62%), Gaps = 13/111 (11%)
Query: 84 LAVMVLVYSVGHISGAHFNPAVTLAFATCKRFPWKQVPAYIVCQVIGSTLAAGTIRLIF- 142
+ VMV++Y++GH+SG HFNPAVT+AFA + K VP Y++ QV GS+LA T+ ++
Sbjct: 1 MIVMVMIYTLGHVSGGHFNPAVTIAFAASRNCYLKIVPPYVLSQVAGSSLAILTLFVMLN 60
Query: 143 -------TGKQDHFVGTMPAGSNMQSFVVEFIITFYLMFVISGVATDNRAI 186
T Q T+P ++F EFII+F LM I GVATD+RAI
Sbjct: 61 TSIPICATVTQFSSPTTIP-----EAFTWEFIISFILMLAICGVATDSRAI 106
>GSVIVT01004850001 assembled CDS
Length = 181
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 13/111 (11%)
Query: 84 LAVMVLVYSVGHISGAHFNPAVTLAFATCKRFPWKQVPAYIVCQVIGSTLAA-------- 135
+ VMV++Y++GH+SG HFNPAVT+AFA + K VP Y++ QV GS+LA
Sbjct: 1 MIVMVMIYTLGHVSGGHFNPAVTIAFAASRNCYLKIVPPYVLSQVAGSSLAILALFVMLN 60
Query: 136 GTIRLIFTGKQDHFVGTMPAGSNMQSFVVEFIITFYLMFVISGVATDNRAI 186
+I + T Q T+P ++F EFII+F LM I GVATD+RAI
Sbjct: 61 TSIPICATVTQFSSPTTIP-----EAFTWEFIISFILMLAICGVATDSRAI 106
>GSVIVT01004718001 assembled CDS
Length = 219
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
Query: 36 SISVPFMQKMIAEVAGTYFLIFAGC-TAVAVN-LNFDKVVTHPG---ISIVWGLAVMVLV 90
S SV ++ ++E T +FAG +A+A L D + PG ++I A+ V V
Sbjct: 12 SFSVGSLKAYLSEFNATLLFVFAGVGSAIAYGKLTSDAALDPPGLVAVAIAHAFALFVGV 71
Query: 91 YSVGHISGAHFNPAVTLAFATCKRFPWKQVPAYIVCQVIGSTLAAGTIRLIFTGKQDHFV 150
+ISG H NPAVT A Y++ Q +GS +A ++ G+
Sbjct: 72 SIAANISGGHLNPAVTFGLAIGGHITILTGIFYVIAQCLGSIVACLLLKFATNGESIPTH 131
Query: 151 GTMPAGSNMQSFVVEFIITFYLMFVISGVATDNR 184
G + ++ V+E +ITF L++ + A D +
Sbjct: 132 GVAAGMNAIEGVVMEIVITFALVYTVYATAVDPK 165
>GSVIVT01035640001 assembled CDS
Length = 253
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 42 MQKMIAEVAGTYFLIFAGC-TAVAVN-LNFDKVVTHPGISIVWGLAVMVLVYSVGHISGA 99
++ ++ E T+ +FAG +A+A L D + + +++ L V V+V + ISG
Sbjct: 18 IRALVMEFIVTFLFVFAGVGSAMATEKLKGDSLDSLFFVAMAHALVVAVMVSAALQISGG 77
Query: 100 HFNPAVTLAFATCKRFPWKQVPAYIVCQVIGSTLAAGTIRLIFTGKQDHFVGTMPAGSN- 158
H NPAVTL + Y + Q + ST+A ++ + TG + V T+ +G
Sbjct: 78 HLNPAVTLGLCVGGHITVVRSVLYFIDQCLASTVACILLKFL-TGGRATPVHTLASGVGC 136
Query: 159 MQSFVVEFIITFYLMFVI 176
+Q ++EFI+TF L+F +
Sbjct: 137 LQGVMLEFILTFSLLFTV 154