Jatropha Genome Database
- JcCB0065721.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0065721.30 - phase: 1 /partial
(109 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01010259001 assembled CDS 117 9e-28
GSVIVT01032336001 assembled CDS 115 4e-27
GSVIVT01035975001 assembled CDS 55 8e-09
GSVIVT01038280001 assembled CDS 53 3e-08
GSVIVT01036486001 assembled CDS 51 9e-08
GSVIVT01030055001 assembled CDS 51 1e-07
GSVIVT01033271001 assembled CDS 51 1e-07
GSVIVT01024457001 assembled CDS 50 2e-07
GSVIVT01013840001 assembled CDS 50 3e-07
GSVIVT01007151001 assembled CDS 49 5e-07
GSVIVT01033052001 assembled CDS 49 5e-07
GSVIVT01012780001 assembled CDS 49 6e-07
GSVIVT01016956001 assembled CDS 49 6e-07
GSVIVT01013571001 assembled CDS 48 9e-07
GSVIVT01020108001 assembled CDS 48 1e-06
GSVIVT01029248001 assembled CDS 48 1e-06
GSVIVT01015815001 assembled CDS 47 1e-06
GSVIVT01025719001 assembled CDS 47 2e-06
GSVIVT01022204001 assembled CDS 47 2e-06
GSVIVT01036918001 assembled CDS 47 2e-06
GSVIVT01000864001 assembled CDS 47 2e-06
GSVIVT01018339001 assembled CDS 46 3e-06
GSVIVT01037880001 assembled CDS 46 4e-06
GSVIVT01036255001 assembled CDS 46 4e-06
GSVIVT01007844001 assembled CDS 45 6e-06
GSVIVT01028141001 assembled CDS 45 8e-06
>GSVIVT01010259001 assembled CDS
Length = 552
Score = 117 bits (293), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%), Gaps = 7/95 (7%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ GR+R+AMRLV KMK GCEPNVW+YN L+DM GRV +LRQVEKLWKEMKR+K+ PD+V
Sbjct: 384 KTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRV 443
Query: 66 TCTGVISAYNKL----TCLLSSSYYSQHKVKGSLL 96
+ T VISAY+K TC+ +Y + ++ G ++
Sbjct: 444 SYTSVISAYSKAGDFETCM---RFYHEFRMNGGVI 475
>GSVIVT01032336001 assembled CDS
Length = 568
Score = 115 bits (288), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 72/95 (75%), Gaps = 7/95 (7%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ GR+R+AMRLV KMK GC+PNVW+YN L+DM GRV +LRQVEKLWKEMKR+K+ PD+V
Sbjct: 370 KTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRV 429
Query: 66 TCTGVISAYNKL----TCLLSSSYYSQHKVKGSLL 96
+ T VISAY+K TC+ +Y + ++ G ++
Sbjct: 430 SYTSVISAYSKAGDFETCM---RFYHEFRMNGGVI 461
>GSVIVT01035975001 assembled CDS
Length = 1113
Score = 54.7 bits (130), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ GR+ DA++L+++M+ NGC+P V I N L+D + + + + K+++ MK K+AP V
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVV 578
Query: 66 TCTGVISAYNK 76
T +++ K
Sbjct: 579 TYNTLLAGLGK 589
>GSVIVT01038280001 assembled CDS
Length = 890
Score = 52.8 bits (125), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 8 GRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTC 67
GR +A+ L +MK GCEPNV Y L+D + N + + K+ EM + + P VT
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372
Query: 68 TGVISAYNK 76
+I Y K
Sbjct: 373 NALIDGYCK 381
>GSVIVT01036486001 assembled CDS
Length = 653
Score = 51.2 bits (121), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 10 IRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTCTG 69
+ +A+RL M+V G P V YN +L ++ +L EM RK+ PD VTC
Sbjct: 309 LEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNT 368
Query: 70 VISAYNKL 77
+I+AY K+
Sbjct: 369 LINAYCKI 376
>GSVIVT01030055001 assembled CDS
Length = 740
Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 7 KGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVT 66
KG + +A RL+ MK NGCEP+ W YN L+ + L ++EM + P+ V+
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515
Query: 67 CTGVISAYNK 76
T +I ++K
Sbjct: 516 YTALIDGHSK 525
Score = 48.5 bits (114), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 4 MVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPD 63
+ R GR + A ++ M+ C PN++ Y+ L+ + + E L KEM+R+ +APD
Sbjct: 593 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPD 652
Query: 64 KVTCTGVISAY 74
+VT T +I +
Sbjct: 653 EVTFTSLIDGF 663
>GSVIVT01033271001 assembled CDS
Length = 852
Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
++G++ +A + TKMK+ GC P+V Y ++ + + L+ EM+ + PD +
Sbjct: 596 KQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSI 655
Query: 66 TCTGVISAYNK 76
C+ ++ A+NK
Sbjct: 656 ACSSLMRAFNK 666
>GSVIVT01024457001 assembled CDS
Length = 1042
Score = 50.1 bits (118), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 42/71 (59%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
R+ + +A+++ M + C+P++W YN ++ + GR R+ +L+K+++ + PD V
Sbjct: 281 RESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAV 340
Query: 66 TCTGVISAYNK 76
T ++ A+ +
Sbjct: 341 TYNSLLYAFAR 351
>GSVIVT01013840001 assembled CDS
Length = 795
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
R G I A+ L+ MK G P++ YN L++ ++ L +KL E+ + P+ +
Sbjct: 29 RNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVI 88
Query: 66 TCTGVISAYNKLTCLLSSSY-YSQHKVKGSLLLLVP 100
T T +I AY K CL + Y Y + VK LVP
Sbjct: 89 TYTTLIDAYCKSQCLEDALYMYDEMTVKS----LVP 120
>GSVIVT01007151001 assembled CDS
Length = 528
Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 8 GRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRR--KIAPDKV 65
GR+ DA +L MK +GC PNV +Y +LD R SL + +L EM++ +P+ V
Sbjct: 215 GRLEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVV 274
Query: 66 TCTGVISA 73
T T +I +
Sbjct: 275 TYTSMIQS 282
>GSVIVT01033052001 assembled CDS
Length = 676
Score = 48.5 bits (114), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 51/92 (55%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
+ F+ + GR+R+A ++ +MK NG +P++ YN L++ R + LR ++LW EM
Sbjct: 405 VSFLCKAGRVREAYGVLQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFASGY 464
Query: 61 APDKVTCTGVISAYNKLTCLLSSSYYSQHKVK 92
+ T +I ++++ + + + QH ++
Sbjct: 465 GVNLKTYNILIQKFSEIGQIQEAQWLFQHMLE 496
>GSVIVT01012780001 assembled CDS
Length = 808
Score = 48.5 bits (114), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 4 MVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPD 63
+ ++G + DA +L KM + G PNV +YN L+D + ++ + L ++K R I PD
Sbjct: 574 LCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPD 633
Query: 64 KVTCTGVISAY 74
+ T + +I+ Y
Sbjct: 634 EFTVSALINGY 644
>GSVIVT01016956001 assembled CDS
Length = 646
Score = 48.5 bits (114), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 43/71 (60%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
R GR+ +A+++ +++ + C+P++ +N L++ G+ + + +KEM+ ++PD V
Sbjct: 484 RAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVV 543
Query: 66 TCTGVISAYNK 76
T + +I + K
Sbjct: 544 TYSTLIECFGK 554
>GSVIVT01013571001 assembled CDS
Length = 996
Score = 48.1 bits (113), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
+ + ++ +A L +MK N P+V+ Y L+D +V L+Q K + EM R
Sbjct: 487 IGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGC 546
Query: 61 APDKVTCTGVISAYNK 76
AP+ VT T +I AY K
Sbjct: 547 APNVVTYTALIHAYLK 562
>GSVIVT01020108001 assembled CDS
Length = 648
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 3 FMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAP 62
+ + G++ +A R++ +M G P+ IY L+D ++ ++ +L+ EM++RKI+P
Sbjct: 232 LLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 291
Query: 63 DKVTCTGVISA 73
D +T T VI
Sbjct: 292 DFITYTAVICG 302
>GSVIVT01029248001 assembled CDS
Length = 821
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
L + +K R+ + + ++ M+ NGC PN +N +L M G + V ++++EMK
Sbjct: 427 LGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGF 486
Query: 61 APDKVTCTGVISAYNKLTCLLSSSYYSQHKVKGSLLLLVPVY 102
P++ T +I AY + + + +K V Y
Sbjct: 487 EPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTY 528
>GSVIVT01015815001 assembled CDS
Length = 718
Score = 47.4 bits (111), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
++G + A L +M + G PN++IYN L+D + +++ KL+ M + + PD V
Sbjct: 372 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431
Query: 66 TCTGVISAYNK 76
T + +I Y K
Sbjct: 432 TYSTMIDGYCK 442
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 7 KGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVT 66
+GRI +A RL+ M +G P+++ YN ++ + + + E++ R + PD VT
Sbjct: 198 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVT 257
Query: 67 CTGVISAYNKLTCLLSSSYYSQHKVKGSLLLLVPVY 102
I Y+K + ++ Y + L+ P+Y
Sbjct: 258 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLY 293
>GSVIVT01025719001 assembled CDS
Length = 648
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
++G +A R+ +M+ G PN+ YN L+D + ++++ KL E++ R + PD
Sbjct: 486 KEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVY 545
Query: 66 TCTGVI 71
TCT +I
Sbjct: 546 TCTSLI 551
>GSVIVT01022204001 assembled CDS
Length = 489
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ G I++ ++++MK N C+P++ +N L+D GR ++E+++K + R K P
Sbjct: 256 KNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLP 315
Query: 66 TCTGVISAYNK 76
T +I+ Y K
Sbjct: 316 TFNSMITNYGK 326
>GSVIVT01036918001 assembled CDS
Length = 826
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
++G++ + +L +M G EP+ + YN L+ R+ L + LW E K R + P+
Sbjct: 538 KEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY 597
Query: 66 TCTGVISAYNK 76
T +I Y K
Sbjct: 598 TYGVMIDGYCK 608
>GSVIVT01000864001 assembled CDS
Length = 729
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 43/70 (61%)
Query: 4 MVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPD 63
+ + GRI + + L+ +M+ N C+P+V+ Y ++ + +L ++W+EM++ K+ PD
Sbjct: 267 LCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPD 326
Query: 64 KVTCTGVISA 73
+ T +++A
Sbjct: 327 VMAYTTLVAA 336
>GSVIVT01018339001 assembled CDS
Length = 569
Score = 46.2 bits (108), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 42/71 (59%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
++G + +A +L +K G PN +YN L++ ++ + Q L++EM+++ IAPD +
Sbjct: 138 KEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGI 197
Query: 66 TCTGVISAYNK 76
T ++S + K
Sbjct: 198 TFNILVSGHYK 208
>GSVIVT01037880001 assembled CDS
Length = 548
Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 43/71 (60%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ G+ + A+++ +M+ GC+PN+ +N L+ M G ++ K+++++K + +PD V
Sbjct: 116 KAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIV 175
Query: 66 TCTGVISAYNK 76
T ++S + +
Sbjct: 176 TWNTLLSVFGQ 186
>GSVIVT01036255001 assembled CDS
Length = 1001
Score = 45.8 bits (107), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
L M R G + DA L + + G +PNVW YN ++ + L + KL+ EM +
Sbjct: 402 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 461
Query: 61 APDKVT 66
+P+ T
Sbjct: 462 SPNDCT 467
>GSVIVT01007844001 assembled CDS
Length = 627
Score = 45.1 bits (105), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
L R GR D L +MKV+ EPN YN L+++ G ++V L+ +M +
Sbjct: 122 LNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENV 181
Query: 61 APDKVTCTGVISAYNK 76
P+ T G+I A K
Sbjct: 182 EPNMETYEGLIFACGK 197
>GSVIVT01028141001 assembled CDS
Length = 730
Score = 45.1 bits (105), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 43/76 (56%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
L + GR +A+ + +M+ +G + + YN LL G+ +V+++++EMK +I
Sbjct: 289 LSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERI 348
Query: 61 APDKVTCTGVISAYNK 76
P+ +T + +I Y+K
Sbjct: 349 FPNLLTYSTLIDVYSK 364