Jatropha Genome Database
- JcCB0058211.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0058211.10 - phase: 0
(592 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01024729001 assembled CDS 495 e-140
GSVIVT01032247001 assembled CDS 175 7e-44
GSVIVT01032812001 assembled CDS 115 6e-26
GSVIVT01034648001 assembled CDS 77 3e-14
GSVIVT01007880001 assembled CDS 72 6e-13
GSVIVT01029304001 assembled CDS 68 1e-11
GSVIVT01014062001 assembled CDS 63 4e-10
GSVIVT01035900001 assembled CDS 62 7e-10
GSVIVT01033000001 assembled CDS 52 1e-06
GSVIVT01008636001 assembled CDS 50 4e-06
>GSVIVT01024729001 assembled CDS
Length = 955
Score = 495 bits (1274), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/550 (49%), Positives = 351/550 (63%), Gaps = 74/550 (13%)
Query: 44 QNFFPSKYNIPLPVASEAENVNYRLKLLKEASKSQQKE-KDGPLFTPLTLPYINLPTDHP 102
++ F IPLPV SE+E+VN++ KL SKS+Q E + P F+P LP ++L D
Sbjct: 478 KSIFQPVPQIPLPVVSESESVNFQSKLAGSVSKSKQVETRSSPWFSPCPLPNLSLAPDRT 537
Query: 103 XXXXXXXXXXDLGLGTLYASSSQKPNKSKLSDYKEHFQHLTGFNSSGFGASESTHKIKLS 162
DLGLGTLYAS+SQ+ + L +KE + +G
Sbjct: 538 SSSCITSVTTDLGLGTLYASNSQETKRLNLQGHKERMNYFSG------------------ 579
Query: 163 SSCSNPSVGGHLDLRDYKSIREALLKRVGWQEEAISAISQAICQCKAGYGRNHGSIARGD 222
+D RD+KS+ AL +VGWQ+EAI AISQ + C+ G R HGS +GD
Sbjct: 580 ----------QMDARDFKSLWRALASKVGWQDEAICAISQTVSSCRTGNARRHGSNLKGD 629
Query: 223 IWLSFLGPDKVGKRRIASILAEIVFGSHENLIPVDLSFHDGGRPSETVFGCQELNDYDAK 282
IWLSFLGPDKVGK+RIA+ LAEI+F S ++L+ VDL + G K
Sbjct: 630 IWLSFLGPDKVGKKRIAAALAEIMFRSSKSLVSVDLGYQHG------------------K 671
Query: 283 FRGKTVVDYIAMELSKKPHSVVLLENVDKADFLVQTSLSKAVRTGKFPNSLGREISINNM 342
FRGKT+ DYIA EL KKP VV LEN+DKAD LVQTSLS+A+RTGKFP+S GREISIN+M
Sbjct: 672 FRGKTITDYIAGELRKKPQLVVFLENIDKADLLVQTSLSQAIRTGKFPDSHGREISINHM 731
Query: 343 IFVTTSTIVKDNVNLSSLKEHIKLSEESIIGAKSWQMQILIEHVTEGASKRNEMSVKVSR 402
IFVTT+T K N NL S KE ++ SEE I+GAKSWQM+ILI VT AS+ N M+
Sbjct: 732 IFVTTATSKKGNRNLVSGKEPVEFSEERILGAKSWQMKILIGCVTGEASRSNGMN----- 786
Query: 403 KATTIASLVNKRKLDRITSSTEQEFNYEARKRASKVWGSSLDLNLPVEGMEENTDSGICD 462
Q+ E KRA K S LDLNLPVE +EE+ DS CD
Sbjct: 787 ----------------------QDKYLEMSKRACKASNSYLDLNLPVEELEEDVDSANCD 824
Query: 463 SDSISENSEAWLEDFFDQIDEKVLFKPFDFDALAEKIVSEINIQFQKVFGLEMLLEIDDE 522
SDS+SE+SEAWLE+F DQ+DEKV FKPF+FDA+A+K++ EI++ FQK+ G ++ LEID E
Sbjct: 825 SDSLSESSEAWLEEFLDQMDEKVTFKPFNFDAVAQKLLKEISLNFQKIIGSDIQLEIDSE 884
Query: 523 AMLQMLAASWSSDVNRAMEDWVERVLGRGFVEARQKYHVTVPYVVKLVTCKGVSVEERAP 582
M+Q+LAA+W S+ A++DWVE+VL + F EARQ+Y +T +VKLV C+G+SVEE+AP
Sbjct: 885 VMVQILAAAWLSEKGGAVDDWVEQVLSKSFTEARQRYRLTAQSLVKLVPCEGLSVEEQAP 944
Query: 583 GICLPARINL 592
G+CLPARI L
Sbjct: 945 GVCLPARIIL 954
>GSVIVT01032247001 assembled CDS
Length = 703
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 196/381 (51%), Gaps = 37/381 (9%)
Query: 174 LDLRDYKSIREALLKRVGWQEEAISAISQAICQCKAGYGRNHGSIARGDIWLSFLGPDKV 233
LD K + + L ++V WQ++A ++ + QCK G G+ + ++GDIWL F GPD++
Sbjct: 308 LDADSVKKLLKGLAEKVSWQQDAARTVATTVTQCKMGNGKRRSAGSKGDIWLLFTGPDRI 367
Query: 234 GKRRIASILAEIVFGSHENLIPVDLSFHDGGRPSETVFGCQELNDYDAKFRGKTVVDYIA 293
GK+++A+ L+E+V G + +I + DG + D FRGKT VD IA
Sbjct: 368 GKKKMAAALSELVCGVNPIMICLGSRRDDG--------------ELDMNFRGKTAVDRIA 413
Query: 294 MELSKKPHSVVLLENVDKADFLVQTSLSKAVRTGKFPNSLGREISINNMIFVTTSTIVKD 353
+ + SV++LE++D+AD LVQ S+ +A+ G+ +S GRE+S+ N+IF+ T+ + D
Sbjct: 414 EAVRRNHFSVIMLEDIDEADMLVQGSIKRAMERGRLVDSHGREVSLGNVIFILTANWLVD 473
Query: 354 NVNLSSLKEHIKLSEESI--IGAKSWQMQILIEHVTEGASKRNEMSVKVSRKATTIASLV 411
N SL L+EE + I WQ+++ +E ++KR + ++T
Sbjct: 474 --NRKSLSNSTLLNEEKLASIAGGGWQLKL---SASEKSAKRRANWLHDEDRST------ 522
Query: 412 NKRKLDRITSSTEQEFNYEARKRASKVWGSSLDLNLPVEGMEENTDSGICDSDSISENSE 471
RK + S+ + N A + GS +L ++ +E C + +
Sbjct: 523 KPRKEN--GSALSFDLNQAADTEDDRADGSRNSSDLTIDHEDEQGPENRCLPPTSAS--- 577
Query: 472 AWLEDFFDQIDEKVLFKPFDFDALAEKIVSEINIQFQKVFGLEMLLEIDDEAMLQMLAAS 531
+ + +D + FKP DF+ + ++ S I +F V G ++ ++++DEA+ ++L
Sbjct: 578 ---RELLNSVDNVITFKPVDFNPIRHQVRSCIARKFSSVMGDKLSIQVEDEALEKILGGV 634
Query: 532 WSSDVNRAMEDWVERVLGRGF 552
W +E+W E+VL GF
Sbjct: 635 WLG--RSGLEEWAEKVLVPGF 653
>GSVIVT01032812001 assembled CDS
Length = 764
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 4 GFPYVADRKEXXXXXXXXXXXXXLNENQYANLGLGIHMDLQNFFPSKYNIPLPVASEAEN 63
GF V D KE +++ + + MDLQ S + PLP+ S+ N
Sbjct: 498 GFQAVKDSKENADNHRSSKTNASPSDSGCKHANSCVSMDLQKVPESTPSTPLPLVSK--N 555
Query: 64 VNYRLKLLKEASKSQQKEKDGPLFTPLTLPYINLPTDHPXXXXXXXXXXDLGLGTLYASS 123
++ KL +++SK+++ E TL ++ DLGLG Y S
Sbjct: 556 ESFLSKLFEKSSKTEEHEPGS--LQSRTLSTSSVGDGRTSPTSVNSVTTDLGLGLFYPPS 613
Query: 124 SQKPNKSKLSDYKEHFQHLTGFNSSGFGASE---STHKIKLSSSCSNPSVGGHLDLRDYK 180
Q +K + H L F SS + A+ + SSSCS P G D RD+K
Sbjct: 614 KQLKKDAK----QTHLGPLPDF-SSRYPANVDLVNGSISNPSSSCSCPDSWGQSDQRDFK 668
Query: 181 SIREALLKRVGWQEEAISAISQAICQCKAGYGRNHGSIARGDIWLSFLGPDKVGKRRIAS 240
++ AL +R+ WQ EAIS IS+ I C+ G + HG+ +GDIW +F+GPD+ K++IA
Sbjct: 669 TLFRALTERIDWQHEAISVISETIAHCRLGNEKRHGASPKGDIWFNFVGPDRFSKKKIAV 728
Query: 241 ILAEIVFGSHENLIPVDLSFHD 262
LAEI++G E+ I VDLS D
Sbjct: 729 ALAEILYGRRESFICVDLSSQD 750
>GSVIVT01034648001 assembled CDS
Length = 781
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 174 LDLRDYKSIREALLKRVGWQEEAISAISQAICQCKAGYGRNHGSIA----RGDIWLSFLG 229
L+ + + + AL +RV WQ++ I I+ I +C++G R + + + WL FLG
Sbjct: 529 LNAENLRILCNALERRVPWQKDIIPEIASTILECRSGTLRGKNKLKQREDKEETWLLFLG 588
Query: 230 PDKVGKRRIASILAEIVFGSHENLIPVDLSFHDGGRPSETVFGCQELNDYDAK-FRGKTV 288
D GK +IA +A++VFGS I + LS R T D+ +K R + V
Sbjct: 589 VDFQGKDKIAREIAKLVFGSQSKFISIGLSSLGSTRADST-------EDFLSKQARDEPV 641
Query: 289 VDYI---AMELSKKPHSVVLLENVDKADFLVQTSLSKAVRTGKFPNSLGREISINNMIFV 345
YI A + + PH V +E+V++ D+ Q + + + +G+ + G S+ + I +
Sbjct: 642 GSYIEKFAEAVHENPHRVFFIEDVEQLDYSSQMGVKRGIESGRIQIAGGEAFSLEDAIII 701
>GSVIVT01007880001 assembled CDS
Length = 881
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 184 EALLKRVGWQEEAISAISQAICQCKAGYGRNHGSIARGDIWLSFLGPDKVGKRRIASILA 243
E L +RV Q++A+SA+++A+ + +AG GR FLGP VGK +A LA
Sbjct: 535 ERLHQRVVGQDQAVSAVAEAVLRSRAGLGRPQQPTG----SFLFLGPTGVGKTELAKALA 590
Query: 244 EIVFGSHENLIPVDLSFHDGGRPSETVFGCQELNDYDAKFRGKTVVDYIAMELSKKPHSV 303
E +F L+ +D+S + + G Y G + + + ++P+SV
Sbjct: 591 EQLFDDENLLVRIDMSEYMEQHSVSRLIGAPP--GYVGHDEGGQLTEAV----RRRPYSV 644
Query: 304 VLLENVDKADFLVQTSLSKAVRTGKFPNSLGREISINNMIFVTTSTI 350
VL + V+KA V +L + + G+ + GR + N + + TS +
Sbjct: 645 VLFDEVEKAHIAVFNTLLQVLDDGRLTDGQGRTVDFTNTVIIMTSNL 691
>GSVIVT01029304001 assembled CDS
Length = 974
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 35/197 (17%)
Query: 158 KIKLSSSCSNPSVGGHL-DLRDYKSIR-----EALLKRVGWQEEAISAISQAICQCKAGY 211
KI L+ S S G L +L+ K+IR + L + V WQ EAIS I++A+ K+
Sbjct: 579 KITLALGTSVYSDSGKLPELKGEKTIRLRDICKLLEENVPWQSEAISPIAEALIDSKS-- 636
Query: 212 GRNHGSIARGDIWLSFLGPDKVGKRRIASILAEIVFGSHENLIPVDLSFHDGGRPSETVF 271
++ + WL G D +GKRR+A +AE VFGS + + +++ D G V
Sbjct: 637 -------SKKETWLLLQGNDSIGKRRLAHAIAESVFGSADLVFRMNMRKLDNG-----VT 684
Query: 272 GCQELNDYDAKFRGKTVVDYIAMELSKKPHSVVLLENVDKADFLVQTSLSKAVRTGKFPN 331
C E+ + L VV++E+VD A+ L+ TG+F +
Sbjct: 685 PCSEI---------------LTEALRAHQKLVVMVEDVDFAEPQFMKFLADGCETGEFRD 729
Query: 332 SLGREISINNMIFVTTS 348
S RE S IF+ T+
Sbjct: 730 SSKREGSFGQAIFILTT 746
>GSVIVT01014062001 assembled CDS
Length = 946
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 182 IREALLKRVGWQEEAISAISQAICQCKAGYGRNHGSIARGDIWLSFLGPDKVGKRRIASI 241
+ E L KRV Q+ AI++IS+A+ + + G + IA + F GP VGK +A
Sbjct: 622 LHEQLRKRVVGQDNAIASISRAVKRSRVGLKDPNRPIA----AMLFCGPTGVGKTELAKA 677
Query: 242 LAEIVFGSHENLIPVDLSFHDGGRPSETVFGCQELNDYDAKFRGKTVVDYIAMELSKKPH 301
LA FGS ++ +D+S + + G Y G T+ + I ++P
Sbjct: 678 LAACYFGSEAAMVRLDMSEYMEQHSVSKLIGSPP--GYVGYGEGGTLTEAI----RRQPF 731
Query: 302 SVVLLENVDKADFLVQTSLSKAVRTGKFPNSLGREISINNMIFVTTSTI 350
+VVLL+ ++KA + L + G +S GR + N + V TS +
Sbjct: 732 TVVLLDEIEKAHPDIFNILLQMFEDGHLTDSQGRRVLFRNALVVMTSNV 780
>GSVIVT01035900001 assembled CDS
Length = 962
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 182 IREALLKRVGWQEEAISAISQAICQCKAGYGRNHGSIARGDIWLSFLGPDKVGKRRIASI 241
+ + L +RV QE A+ +++ AI + +AG IA F+GP VGK +A
Sbjct: 643 LEQVLHQRVVGQENAVKSVADAIRRSRAGLSDPIRPIA----SFMFMGPTGVGKTELAKA 698
Query: 242 LAEIVFGSHENLIPVDLSFHDGGRPSETVFGCQELNDYDAKFRGKTVVDYIAMELSKKPH 301
LA +F + L+ +D++ + + G Y G + + + ++P+
Sbjct: 699 LAGYLFNTENALVRIDMTEYMEKHAVSRLVGAPP--GYVGYEEGGQLTEVV----RRRPY 752
Query: 302 SVVLLENVDKADFLVQTSLSKAVRTGKFPNSLGREISINNMIFVTTSTI 350
SVVL + ++KA V L + + G+ +S GR +S N + + TS I
Sbjct: 753 SVVLFDEIEKAHHDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNI 801
>GSVIVT01033000001 assembled CDS
Length = 551
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 193 QEEAISAISQAICQCKAGYGRNHGSIARGDIWLSFLGPDKVGKRRIASILAEIVFGSHEN 252
Q++A+ AI +A+ + AG IA F GP VGK +A ++A FGS E
Sbjct: 289 QDDAVKAICRALRRDGAGIRDPTRPIA----SFLFTGPTGVGKTELAKLIALEYFGSKEA 344
Query: 253 LIPVDLSFHDGGRPSETVFGCQELNDYDAKFRGKTVVDYIAMELSKKPHSVVLLENVDKA 312
++ +D+S + + C Y G + + + ++P+++VL + ++KA
Sbjct: 345 MVRIDMSEYMEKHTVSRL--CGSPPGYVGHDEGGQLTEAV----RRRPYNLVLFDEIEKA 398
Query: 313 DFLVQTSLSKAVRTGKFPNSLGREISINNMIFVTTSTI 350
V + + + G+ + GR + N + + TS I
Sbjct: 399 HRDVMNVMLQILDDGRLTDGKGRTVDFKNTLIIMTSNI 436
>GSVIVT01008636001 assembled CDS
Length = 746
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 182 IREALLKRVGWQEEAISAISQAICQCKAGYGRNHGSIARGDIWLSFLGPDKVGKRRIASI 241
+ E L +RV Q+EA+ AIS+AI + + G + IA F GP VGK +A
Sbjct: 648 MEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRPIA----SFIFSGPTGVGKSELAKA 703
Query: 242 LAEIVFGSHENLIPVDLS 259
LA FGS E +I +D+S
Sbjct: 704 LAAYYFGSEEAMIRLDMS 721