Jatropha Genome Database

JcCB0049951.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0049951.20 - phase: 1 /pseudo/partial
         (470 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01017959001 assembled CDS                                       509   e-144
GSVIVT01017954001 assembled CDS                                       502   e-142
GSVIVT01017952001 assembled CDS                                       477   e-135
GSVIVT01017958001 assembled CDS                                       419   e-117
GSVIVT01019873001 assembled CDS                                       363   e-101
GSVIVT01038230001 assembled CDS                                       181   8e-46
GSVIVT01004079001 assembled CDS                                       153   2e-37
GSVIVT01005410001 assembled CDS                                       145   3e-35
GSVIVT01007669001 assembled CDS                                       144   1e-34

>GSVIVT01017959001 assembled CDS
          Length = 676

 Score =  509 bits (1311), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 234/312 (75%), Positives = 272/312 (87%)

Query: 155 PVKMPNIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEF 214
           PV M N+FCIFER+AGDIMWRHTE  IP +++TE RPEVSLVVRMVS VGNYDYI DWEF
Sbjct: 357 PVNMTNVFCIFERYAGDIMWRHTEAEIPGKLITESRPEVSLVVRMVSAVGNYDYIIDWEF 416

Query: 215 KQSGSIKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVD 274
            QSGSIK++VGL+G+LEVRG+ YTH DQI EEVYGTLLA+NT+G  HDHFLTYHLDLDVD
Sbjct: 417 LQSGSIKLSVGLSGVLEVRGTTYTHVDQIHEEVYGTLLADNTLGAYHDHFLTYHLDLDVD 476

Query: 275 GASNSFIKSKMQMTPITHNLSPRKSYWKVISEVAKTESDARIKLGLEEADLLVVNPNKKT 334
           G +NSF+KS ++ T ++ N SPR+SYW V+SE AK ESDA+I+LGL+ A+LLVVNPNK+T
Sbjct: 477 GDTNSFVKSNLRKTLVSGNRSPRRSYWTVVSETAKRESDAKIQLGLKPAELLVVNPNKRT 536

Query: 335 KMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGD 394
           K+GN +GYRLIPGS   PLL++DDY+Q RGAFT+YNVWVTPYNKSEKW GGLY DQSRGD
Sbjct: 537 KVGNYVGYRLIPGSVVGPLLTDDDYSQRRGAFTRYNVWVTPYNKSEKWVGGLYTDQSRGD 596

Query: 395 DTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNSVLK 454
           DTLA WSLR+R IENKDIV+WYT+GFHH+PYQEDFPLMPT+S GFELRP+NFFD N VLK
Sbjct: 597 DTLAQWSLRDREIENKDIVMWYTMGFHHVPYQEDFPLMPTISGGFELRPSNFFDSNPVLK 656

Query: 455 VKPPRPVDQSNC 466
           VKPPR V   +C
Sbjct: 657 VKPPRQVKWPSC 668


>GSVIVT01017954001 assembled CDS
          Length = 674

 Score =  502 bits (1292), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 234/314 (74%), Positives = 269/314 (85%)

Query: 155 PVKMPNIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEF 214
           PVK+ N FCIFE+ AG IMWRHTE  IP + + EVRPEVSLVVRMV+TVGNYDYI DWEF
Sbjct: 359 PVKISNAFCIFEQQAGRIMWRHTEVEIPGEEIREVRPEVSLVVRMVATVGNYDYILDWEF 418

Query: 215 KQSGSIKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVD 274
           K SGSIK+ VGLTG+LEV+G  YTH  QIKE+VYGTLLA NT+GVNHDHFLTYHLDLDVD
Sbjct: 419 KPSGSIKLGVGLTGILEVKGVSYTHTSQIKEDVYGTLLAHNTIGVNHDHFLTYHLDLDVD 478

Query: 275 GASNSFIKSKMQMTPITHNLSPRKSYWKVISEVAKTESDARIKLGLEEADLLVVNPNKKT 334
           G +NSF+K+ ++   +  N+SPRKSYW V+SE AKTESDA+I+LGL+ A+L+VVNPNKKT
Sbjct: 479 GDANSFVKANLETKRVKDNISPRKSYWTVVSETAKTESDAQIQLGLKPAELIVVNPNKKT 538

Query: 335 KMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGD 394
           K+GN +GYRLIPGS +SPLLS+DDY QIRGAFTKY+VW+TPYNKSEKWAGGLY DQSRGD
Sbjct: 539 KLGNYVGYRLIPGSLSSPLLSDDDYPQIRGAFTKYDVWITPYNKSEKWAGGLYMDQSRGD 598

Query: 395 DTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNSVLK 454
           DTLA+WS RNR IENKDIVLWYT+GFHH+P QEDFP+MPTLS GFELRP NFF+RN VLK
Sbjct: 599 DTLAVWSQRNREIENKDIVLWYTIGFHHVPCQEDFPVMPTLSGGFELRPTNFFERNPVLK 658

Query: 455 VKPPRPVDQSNCSA 468
            KPP      NC+ 
Sbjct: 659 TKPPTYGHWPNCTT 672


>GSVIVT01017952001 assembled CDS
          Length = 667

 Score =  477 bits (1227), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 222/313 (70%), Positives = 258/313 (82%)

Query: 155 PVKMPNIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEF 214
           P+ + N FC++E+ AG IMWRHTE  IP + + EVRPEVSLVVRMV  + NYDYI DWEF
Sbjct: 354 PMSISNAFCVYEQEAGRIMWRHTETDIPGEEIKEVRPEVSLVVRMVVALTNYDYILDWEF 413

Query: 215 KQSGSIKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVD 274
           K SGSIK  VGLTG+  V+G  YTH DQIKE+VYGTLLA N +GVNHDHF TY LDLDVD
Sbjct: 414 KPSGSIKFGVGLTGIPAVKGVSYTHTDQIKEDVYGTLLAPNAIGVNHDHFFTYRLDLDVD 473

Query: 275 GASNSFIKSKMQMTPITHNLSPRKSYWKVISEVAKTESDARIKLGLEEADLLVVNPNKKT 334
           G +NSF+K+ ++   +T N SPRKSYW V+SE AKTESDA+I+L L+  + +VVNPNKKT
Sbjct: 474 GDANSFVKANLETKRVTDNSSPRKSYWTVVSETAKTESDAQIQLRLKPVEQIVVNPNKKT 533

Query: 335 KMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGD 394
           K+GN +GYRLIPGS +SPLLS+DDY QIRGAFTKY+VW+TPYNKSEKWAGGLY DQSRGD
Sbjct: 534 KLGNYVGYRLIPGSLSSPLLSDDDYPQIRGAFTKYDVWITPYNKSEKWAGGLYMDQSRGD 593

Query: 395 DTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNSVLK 454
           DTLA+WS RNR IENKDIVLWYT+GFHH+P QEDFP+MPTLS GFELRP NFF+ N VLK
Sbjct: 594 DTLAVWSQRNREIENKDIVLWYTIGFHHVPCQEDFPVMPTLSGGFELRPTNFFENNPVLK 653

Query: 455 VKPPRPVDQSNCS 467
            KPP PV   NC+
Sbjct: 654 TKPPTPVSWPNCT 666


>GSVIVT01017958001 assembled CDS
          Length = 647

 Score =  419 bits (1078), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 195/302 (64%), Positives = 243/302 (80%), Gaps = 2/302 (0%)

Query: 155 PVKMPNIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEF 214
           P K+    CIFER +GD+ WRHTE  +P + +  V PEV+LVVRMV+TVGNYDY+ DWEF
Sbjct: 346 PQKVDRAICIFERHSGDVAWRHTEIGVPGRTIRRVEPEVNLVVRMVATVGNYDYVLDWEF 405

Query: 215 KQSGSIKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVD 274
           +QSGSIKV VGLTG+LE++ + YT+ DQI+++V+GTLLA++ + VNHDHFLTY+LDLDVD
Sbjct: 406 QQSGSIKVGVGLTGVLEMKATSYTNTDQIRKDVFGTLLADDIVAVNHDHFLTYYLDLDVD 465

Query: 275 GASNSFIKSKM--QMTPITHNLSPRKSYWKVISEVAKTESDARIKLGLEEADLLVVNPNK 332
           G  NSFIK+K+  + T      SPRKSYW V+ ++AKTE++ RI+LG + A+LLVVN NK
Sbjct: 466 GMDNSFIKAKLGTRKTTSVGIKSPRKSYWSVVKKMAKTEAEGRIRLGSKPAELLVVNTNK 525

Query: 333 KTKMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSR 392
           KTK GN +GYRLI G     LLS+DDY QIR A+TKY +WVT YNKSE+WAGG YAD+SR
Sbjct: 526 KTKTGNYVGYRLIAGQPVYSLLSDDDYPQIRVAYTKYQMWVTAYNKSERWAGGFYADRSR 585

Query: 393 GDDTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNSV 452
           GDD LA+WS RNR I NKD+V+WYTVGFHHIPYQED+P MPTL  GF+LRPANFF+RN +
Sbjct: 586 GDDELAVWSNRNRSIANKDVVVWYTVGFHHIPYQEDYPAMPTLHDGFQLRPANFFERNPL 645

Query: 453 LK 454
           L+
Sbjct: 646 LR 647


>GSVIVT01019873001 assembled CDS
          Length = 636

 Score =  363 bits (933), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/318 (53%), Positives = 230/318 (72%), Gaps = 3/318 (0%)

Query: 155 PVKMPNIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEF 214
           P    N+ CIFE +AGDI WRH E  I    + EVRP+V+LVVRM ++V NYDYI DW F
Sbjct: 316 PFVQSNMICIFESYAGDIGWRHAESPITGMGIREVRPKVTLVVRMAASVANYDYIVDWVF 375

Query: 215 KQSGSIKVTVGLTGLLEVRGSIYTHKDQI--KEEVYGTLLAENTMGVNHDHFLTYHLDLD 272
           +  G I++ VGL+G+L V+G+ Y + +Q+  +E +YGTLL+EN +GV HDH+LT++LD+D
Sbjct: 376 QTDGLIRIKVGLSGILMVKGTPYVNMNQVPGQEYLYGTLLSENVIGVIHDHYLTFYLDMD 435

Query: 273 VDGASNSFIKSKMQMTPITHNLSPRKSYWKVISEVAKTESDARIKLGL-EEADLLVVNPN 331
           VDG+ NSF+K  ++     +  SPR+S+ K   +VAKTE DA+IK  L E A+  V+NP+
Sbjct: 436 VDGSDNSFVKVNLEKQMTANGESPRRSFLKATRKVAKTEKDAQIKFKLYEPAEFHVINPS 495

Query: 332 KKTKMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQS 391
           KKT++GN +GY+++ G   + LL  +D  Q RGAFT   +WVTPYN+SE+WAGGL   QS
Sbjct: 496 KKTRVGNPVGYKVVAGGTAASLLDHEDPPQKRGAFTNNQIWVTPYNRSEQWAGGLLVSQS 555

Query: 392 RGDDTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNS 451
           +GDD LA+WS RNR IENKDIV+WYT+GFHHIP QEDFP+MPT+SS F+L+P NFF+ N 
Sbjct: 556 QGDDNLAVWSDRNRPIENKDIVVWYTLGFHHIPCQEDFPVMPTVSSSFDLKPVNFFESNP 615

Query: 452 VLKVKPPRPVDQSNCSAD 469
           +L++ P    D   C  D
Sbjct: 616 ILRMPPNVENDLPICKPD 633


>GSVIVT01038230001 assembled CDS
          Length = 211

 Score =  181 bits (458), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 86/187 (45%), Positives = 127/187 (67%), Gaps = 3/187 (1%)

Query: 155 PVKMPNIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEF 214
           P+   N+ C+F R+ GD+ WRH+E  +P   + E RP V+LV R+ ++VGNYDYI DWEF
Sbjct: 12  PLIQSNMICVFARYTGDVGWRHSETFLPGFNIREARPNVTLVARIAASVGNYDYIFDWEF 71

Query: 215 KQSGSIKVTVGLTGLLEVRGSIY--THKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLD 272
           +  G I+V VGL+G+L V+G+     H+   ++++ GTL++EN +GV HDHF+T+HLDLD
Sbjct: 72  QTDGLIRVKVGLSGMLMVKGTPLENIHQAPNQDDMSGTLVSENVIGVVHDHFITFHLDLD 131

Query: 273 VDGASNSFIKSKMQMTPITHNLSPRKSYWKVISEVAKTESDARIKLGL-EEADLLVVNPN 331
           +D   NSF+K  +         SPRKSY K    VA TE+DA+IKL L + ++  V+NP 
Sbjct: 132 IDNTDNSFVKVNLVKEETLTGQSPRKSYLKAKRNVAATENDAKIKLKLYDPSEFHVINPL 191

Query: 332 KKTKMGN 338
           K++++GN
Sbjct: 192 KRSRLGN 198


>GSVIVT01004079001 assembled CDS
          Length = 774

 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 154/317 (48%), Gaps = 24/317 (7%)

Query: 160 NIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEFKQSGS 219
           N  C+ E   G ++W+H ++      + EVR    L V  V TV NY+Y   W F Q G 
Sbjct: 456 NCVCLHEEDHG-MLWKHQDW---RTGLAEVRRSRRLTVSFVCTVANYEYGFFWHFYQDGK 511

Query: 220 IKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVDGASNS 279
           I+  V LTG+L + G++     +I++  YGT +A       H HF    +D+ VD     
Sbjct: 512 IEAEVKLTGILSL-GAL--QPGEIRK--YGTTIAPGLYAPVHQHFFVARMDMAVDCKPGE 566

Query: 280 FIKSKMQMT-----PITHNLSPRKSYWKVISEVAKTESDA-RIKLGLEEADLLVVNPNKK 333
                +++      P  +N+     Y +   ++ ++E  A R    L     ++ N    
Sbjct: 567 TFNQVVEVNVKVEEPGKNNVHNNAFYAE--EKLLRSEMQAMRDCNPLSARHWIIRNTRTV 624

Query: 334 TKMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQS-R 392
            + G L GY+L+PGS   PL   +     R AF K+N+WVTPY + E + GG + +Q+ R
Sbjct: 625 NRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTPYARDEMYPGGEFPNQNPR 684

Query: 393 GDDTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNSV 452
             + LA W  +NR +E  DIVLWY  G  HIP  ED+P+MP    GF L P  FF+ +  
Sbjct: 685 VGEGLATWVNQNRSLEETDIVLWYVFGVTHIPRLEDWPVMPVEHIGFRLMPHGFFNCSPA 744

Query: 453 LKVKPPRPVDQSNCSAD 469
           + V P      S C  D
Sbjct: 745 VDVPP------STCELD 755


>GSVIVT01005410001 assembled CDS
          Length = 116

 Score =  145 bits (367), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 61/98 (62%), Positives = 79/98 (80%)

Query: 360 TQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGDDTLAIWSLRNRVIENKDIVLWYTVG 419
           +  +  F    +WVTPYN++E+WAGGL+  QS+G+DTLA+WS RNR IEN+DIVLWYT+G
Sbjct: 4   SSTKKCFHNNQIWVTPYNRTEQWAGGLFVYQSKGEDTLAVWSDRNRPIENRDIVLWYTLG 63

Query: 420 FHHIPYQEDFPLMPTLSSGFELRPANFFDRNSVLKVKP 457
           FHHIP QEDFP+MPT+SS F+L+P NFF+ N VL+  P
Sbjct: 64  FHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPVLRAAP 101


>GSVIVT01007669001 assembled CDS
          Length = 1372

 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 151/305 (49%), Gaps = 19/305 (6%)

Query: 160 NIFCIFERFAGDIMWRHTEYSIPEQVVTEVRPEVSLVVRMVSTVGNYDYINDWEFKQSGS 219
           N  C+ E   G I+W+H ++      + EVR    L    + TV NY+Y   W F Q+ S
Sbjct: 469 NCVCLHEEDHG-ILWKHQDW---RTGLAEVRRSRRLTASFICTVANYEYGFFWHFYQA-S 523

Query: 220 IKVTVGLTGLLEVRGSIYTHKDQIKEEVYGTLLAENTMGVNHDHFLTYHLDLDVDG---- 275
             +   LTG+L + G++   + +     YGT +A       H HF    +D+ VD     
Sbjct: 524 GNLHFKLTGILSL-GALQPGESR----KYGTTIAPGLYAPVHQHFFIARMDMAVDCKPGE 578

Query: 276 ASNSFIKSKMQM-TPITHNLSPRKSYWKVISEVAKTESDA-RIKLGLEEADLLVVNPNKK 333
           A N  ++  M++  P   N+     Y +   ++ ++E  A R    L     +V N    
Sbjct: 579 AFNQVVEVNMKVENPGKDNVHNNAFYAE--EKLLRSEMQAMRDCDPLSARHWIVRNTRTV 636

Query: 334 TKMGNLIGYRLIPGSATSPLLSEDDYTQIRGAFTKYNVWVTPYNKSEKWAGGLYADQS-R 392
            + G L GY+L+PGS   PL   +     R AF K+N+WVTPY + E + GG + +Q+ R
Sbjct: 637 NRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTPYARDEMFPGGEFPNQNPR 696

Query: 393 GDDTLAIWSLRNRVIENKDIVLWYTVGFHHIPYQEDFPLMPTLSSGFELRPANFFDRNSV 452
             + LA W  +NR +E  DIVLWY  G  H+P  ED+P+MP    GF L+P  FF+ +  
Sbjct: 697 VGEGLATWVKQNRPLEETDIVLWYVFGLVHVPRLEDWPVMPVERIGFMLQPHGFFNCSPA 756

Query: 453 LKVKP 457
           + V P
Sbjct: 757 VDVPP 761