Jatropha Genome Database

JcCB0049461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0049461.10 - phase: 0 /partial
         (210 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01022808001 assembled CDS                                       326   6e-90
GSVIVT01007958001 assembled CDS                                       278   2e-75
GSVIVT01003875001 assembled CDS                                       262   7e-71
GSVIVT01035957001 assembled CDS                                       242   1e-64
GSVIVT01000127001 assembled CDS                                       114   3e-26
GSVIVT01020145001 assembled CDS                                       100   7e-22
GSVIVT01007836001 assembled CDS                                        99   1e-21
GSVIVT01011372001 assembled CDS                                        98   3e-21
GSVIVT01031126001 assembled CDS                                        97   5e-21
GSVIVT01038194001 assembled CDS                                        97   7e-21
GSVIVT01014581001 assembled CDS                                        92   1e-19
GSVIVT01030643001 assembled CDS                                        91   4e-19

>GSVIVT01022808001 assembled CDS
          Length = 1082

 Score =  326 bits (835), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 154/173 (89%), Positives = 167/173 (96%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           VDLRRAYNCEIMLTKIK+PLP+M+NA+LALDSS+LDIDQVENLIKFCPTKEEME LKNY 
Sbjct: 735 VDLRRAYNCEIMLTKIKIPLPDMLNAILALDSSTLDIDQVENLIKFCPTKEEMELLKNYP 794

Query: 83  GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
           GDK MLGKCEQFFLELMKVPRVE+KLRVF+F+ITFS+QV DLR NLNTIN+AAREVKES 
Sbjct: 795 GDKAMLGKCEQFFLELMKVPRVESKLRVFSFKITFSSQVKDLRNNLNTINDAAREVKESV 854

Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLC 195
           KLRQIMQTILTLGNALNQGTARG+A+GFKLDSLLKL+DTRARNNKMTLMHYLC
Sbjct: 855 KLRQIMQTILTLGNALNQGTARGAAIGFKLDSLLKLADTRARNNKMTLMHYLC 907


>GSVIVT01007958001 assembled CDS
          Length = 1010

 Score =  278 bits (710), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 132/175 (75%), Positives = 153/175 (87%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           +DLRRA N EIMLTK+K+PL +M+ AVLA+D S LD+DQVENLIKFCPTKEEME LK YT
Sbjct: 679 IDLRRANNTEIMLTKVKMPLSDMMAAVLAMDESILDVDQVENLIKFCPTKEEMELLKAYT 738

Query: 83  GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
           GDKE LGKCEQFFLELMKVPRVE+KLRVF+F+I F +Q+ D R +LNT+N+A  EV+ S 
Sbjct: 739 GDKEALGKCEQFFLELMKVPRVESKLRVFSFKIQFGSQISDFRKSLNTVNSACEEVRNSV 798

Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV 197
           KL++IM+ IL LGN LNQGTARGSAVGFKLDSLLKL+DTRA N+KMTLMHYLCKV
Sbjct: 799 KLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKV 853


>GSVIVT01003875001 assembled CDS
          Length = 947

 Score =  262 bits (670), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 124/180 (68%), Positives = 153/180 (85%), Gaps = 5/180 (2%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           ++ RRAYNCEIML+K+KVPL E++N+VLAL+ S+LD+DQV+NLIKFCPTK+E+E LK Y 
Sbjct: 663 IEHRRAYNCEIMLSKVKVPLHELMNSVLALEDSALDVDQVDNLIKFCPTKDEIELLKGYK 722

Query: 83  GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAARE----- 137
           G+KE LGKCEQF LELM+VPRVE KLRVF+F+I F + V  LR +LN +N+AA E     
Sbjct: 723 GEKEKLGKCEQFLLELMQVPRVETKLRVFSFKIQFPSLVSYLRTSLNVVNSAAEEASYSP 782

Query: 138 VKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV 197
           +K S KL++IMQTIL LGNALNQGT+RGSA+GF+LDSLLK++DTRARN K TLMHYLCKV
Sbjct: 783 IKNSLKLKRIMQTILQLGNALNQGTSRGSAIGFRLDSLLKIADTRARNKKTTLMHYLCKV 842


>GSVIVT01035957001 assembled CDS
          Length = 1642

 Score =  242 bits (617), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/151 (74%), Positives = 135/151 (89%)

Query: 47   NAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYTGDKEMLGKCEQFFLELMKVPRVEA 106
            ++VLALD S+LD+DQV+NLIKFCPTKEE+E LK Y GDK  LGKCEQFFLELMKVPRVE+
Sbjct: 1251 SSVLALDDSALDVDQVDNLIKFCPTKEEIELLKGYNGDKGNLGKCEQFFLELMKVPRVES 1310

Query: 107  KLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESAKLRQIMQTILTLGNALNQGTARGS 166
            KLRVF+F+I F  QV DL+ NLN +N+A+ E++ S KL++IMQTIL+LGNALN GTARGS
Sbjct: 1311 KLRVFSFKIQFRIQVSDLKNNLNVVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGS 1370

Query: 167  AVGFKLDSLLKLSDTRARNNKMTLMHYLCKV 197
            A+GF+LDSLLKL+DTRARNNKMTLM+YLCKV
Sbjct: 1371 AIGFRLDSLLKLTDTRARNNKMTLMNYLCKV 1401



 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 27/29 (93%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLA 51
           +DLRRAYNCEIMLTK+K+PLP+++  +L+
Sbjct: 760 IDLRRAYNCEIMLTKVKMPLPDLMMNILS 788


>GSVIVT01000127001 assembled CDS
          Length = 852

 Score =  114 bits (285), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 100/174 (57%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           +D +++ N  I+L  + V   E+  A+L  +  SL  + +E L+K  PTKEE   L++Y+
Sbjct: 480 LDPKKSQNIAILLRALNVTRDEVSEALLDGNPESLGAELLETLVKMAPTKEEEIKLRDYS 539

Query: 83  GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
           GD   LG  E+F   ++ +P    ++    +R  F T+V  LR +  T+  A+ E+K S 
Sbjct: 540 GDISKLGTAERFLKAVLDIPYAFKRVEAMLYRANFDTEVKYLRKSFQTLEAASEELKNSR 599

Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
              ++++ +L  GN +N GT RG A  FKLD+LLKL D +  + K TL+H++ +
Sbjct: 600 LFLKLLEAVLRTGNRMNVGTNRGDARAFKLDTLLKLVDIKGTDGKTTLLHFVVQ 653


>GSVIVT01020145001 assembled CDS
          Length = 724

 Score =  100 bits (248), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 3/175 (1%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           +D R++ N  I+L  + +   E++NA++  +   L+ D +E L K  PTKEE   +  + 
Sbjct: 327 LDSRKSQNTAIVLRSLAISRKEILNALI--EGQDLNADTLEKLTKIAPTKEEESQILAFK 384

Query: 83  GDKEMLGKCEQFFLELMK-VPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKES 141
           GD   L   E F   ++K VP    +L    FR+ + +++  LR  L T+    +E++  
Sbjct: 385 GDPTRLADAESFLYHILKAVPSAFDRLSAMFFRLNYDSEILHLRECLQTLELGCKELRTR 444

Query: 142 AKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
               ++++ IL  GN +N GT+RG+A  F L +L KLSD ++ + K TL+H++ +
Sbjct: 445 GLFLKLLEAILKAGNRMNAGTSRGNAQAFNLAALQKLSDVKSTDGKTTLLHFVVE 499


>GSVIVT01007836001 assembled CDS
          Length = 1369

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 103/190 (54%), Gaps = 5/190 (2%)

Query: 8   SNLTTKLPGFCFLLQVDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIK 67
           S+  + LP   F+L+   R++ N  I+L  + V   E+++A+L  +   L  D +E L K
Sbjct: 480 SSSNSALPTQIFILEP--RKSQNTAIVLRSLAVSRREILDALL--EGQGLTTDTLEKLTK 535

Query: 68  FCPTKEEMETLKNYTGDKEMLGKCEQFFLELMKV-PRVEAKLRVFAFRITFSTQVDDLRC 126
             PT+EE   +  + G+   L   E F   ++KV P    +     FR  +  ++  L+ 
Sbjct: 536 ISPTQEEESKILQFNGNPTKLADAESFLYHILKVVPSAFMRFNAMLFRTNYDPEILHLKE 595

Query: 127 NLNTINNAAREVKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNN 186
           +L T+  A +E++      ++++ IL  GN +N GTARG+A GF L +L +LSD ++ + 
Sbjct: 596 SLQTLELACKELRSRGLFLKLLEAILKAGNRMNAGTARGNAQGFNLSALRRLSDVKSIDG 655

Query: 187 KMTLMHYLCK 196
           K TL+H++ +
Sbjct: 656 KTTLLHFVVE 665


>GSVIVT01011372001 assembled CDS
          Length = 751

 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 95/175 (54%), Gaps = 3/175 (1%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           +D R++ N  I+L  + +   E++NA++      L+ D +E L K  PTKEE   +  + 
Sbjct: 358 LDSRKSQNTAIVLRSLAISRKEILNALI--KGQDLNADALEKLTKIAPTKEEESQILAFE 415

Query: 83  GDKEMLGKCEQFFLELMK-VPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKES 141
           GD   L   E F   ++K VP    +L    FR  + +++  LR  L T+    +E++  
Sbjct: 416 GDPTRLADAESFLYHILKAVPSAFIRLSAMFFRSNYDSEILHLRECLQTLELGCKELRTR 475

Query: 142 AKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
               ++++ IL  GN +N GT+RG+A  F L +L KLSD ++ + K TL+H++ +
Sbjct: 476 GLFLKLLEAILEAGNRMNAGTSRGNAQAFNLAALQKLSDVKSTDGKTTLLHFVVE 530


>GSVIVT01031126001 assembled CDS
          Length = 466

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 79/138 (57%)

Query: 59  IDQVENLIKFCPTKEEMETLKNYTGDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFS 118
           + Q+E L K  PT EE   L +Y GD   LG  E+F   ++ +P    ++    ++ TF 
Sbjct: 178 LQQLEALAKMVPTDEEEAKLSSYNGDINELGSAERFVKAMLDIPFAFLRIEAMLYKETFE 237

Query: 119 TQVDDLRCNLNTINNAAREVKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKL 178
            +V  LR + + +  A +E++ S    ++++ +L  GN +N GT RG A  FKLD+LLKL
Sbjct: 238 DEVVHLRKSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKL 297

Query: 179 SDTRARNNKMTLMHYLCK 196
           SD +  + K TL+H++ +
Sbjct: 298 SDVKGTDGKTTLLHFVVQ 315


>GSVIVT01038194001 assembled CDS
          Length = 651

 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 105/186 (56%), Gaps = 1/186 (0%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           +D +++ N  I+L  + V + E+  A+L  ++ +L  + +E+L+K  PTKEE   LK + 
Sbjct: 461 LDPKKSQNIAILLRALNVTIDEVCEALLEGNTDTLGTELLESLLKMAPTKEEECKLKEFK 520

Query: 83  GDKEM-LGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKES 141
            +    LG  E+F   ++ +P    ++    +   F ++V+ L+ + +T+  A  E++ S
Sbjct: 521 DESPFKLGPAERFLRAVLDIPFAFKRVDAMLYIANFDSEVEYLKRSFDTLEAACEELRNS 580

Query: 142 AKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKVDLQN 201
               ++++ +L  GN +N GT RG A  FKLD+LLKL D +  + K TL+H++ +  ++ 
Sbjct: 581 RMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRA 640

Query: 202 LNSESC 207
             S +C
Sbjct: 641 EGSLAC 646


>GSVIVT01014581001 assembled CDS
          Length = 499

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 2/173 (1%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           +D +++ N  I+L  + V   E  +A+   + + L ++ ++ L+K  PT EE   L+ ++
Sbjct: 108 IDSKKSQNLAILLRALNVTTEEFCDAIQ--EGNELPVELLQTLLKMAPTAEEELKLRLFS 165

Query: 83  GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
           G+   LG  E+F   L+ +P    +L    F  +    +  L+ +  T+  A +E+K S 
Sbjct: 166 GNLSQLGPAERFLKVLVDIPFAFKRLESLLFMGSLQEDISMLKESFATLEAACKELKSSR 225

Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLC 195
              ++++ +L  GN +N GT RG A  FKLD+LLKL+D +  + K TL+H++ 
Sbjct: 226 LFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGVDGKTTLLHFVV 278


>GSVIVT01030643001 assembled CDS
          Length = 638

 Score = 90.9 bits (224), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 96/173 (55%), Gaps = 2/173 (1%)

Query: 23  VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
           ++ ++A N  I+L  + V   E+ +A+   + + L  + ++ L+K  PT +E   L+ ++
Sbjct: 291 INPKKAQNLSILLRALNVTTEEVYDALK--EGNELPAELLQTLLKMAPTPDEELKLRLFS 348

Query: 83  GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
           G+   LG  E+F   L+++P    ++    F  +   +V  ++ +   +  A +E++ S 
Sbjct: 349 GNTSQLGPAERFLKVLVEIPFAFKRMEALLFMSSLQEEVSGIKESFAALEVACKELRNSR 408

Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLC 195
              ++++ +L  GN +N GT RG A  FKLD+LLKLSD +  + K TL+H++ 
Sbjct: 409 LFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGIDGKTTLLHFVV 461