Jatropha Genome Database
- JcCB0044181.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0044181.20 + phase: 0 /pseudo/partial
(233 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01031067001 assembled CDS 348 2e-96
GSVIVT01007770001 assembled CDS 92 3e-19
GSVIVT01000266001 assembled CDS 89 2e-18
GSVIVT01020856001 assembled CDS 87 7e-18
GSVIVT01008708001 assembled CDS 84 7e-17
GSVIVT01018213001 assembled CDS 83 1e-16
GSVIVT01002278001 assembled CDS 78 3e-15
GSVIVT01033394001 assembled CDS 70 6e-13
GSVIVT01000590001 assembled CDS 69 2e-12
GSVIVT01025490001 assembled CDS 50 1e-06
GSVIVT01017032001 assembled CDS 48 3e-06
GSVIVT01029025001 assembled CDS 47 7e-06
>GSVIVT01031067001 assembled CDS
Length = 535
Score = 348 bits (892), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/219 (80%), Positives = 185/219 (84%), Gaps = 21/219 (9%)
Query: 1 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN 60
MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN
Sbjct: 1 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN 60
Query: 61 TLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVAL 120
TLLKEMQIQNPTAIMIARTAVAQDD SGDGTTSTV+FIGELMKQSERYIDEG
Sbjct: 61 TLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERYIDEG-------- 112
Query: 121 NLIIGLLHCMHPRVLVDGFEVAKRATLQFLEKFKTPVIMGDEPDKEILKMVARTTLRTKL 180
MHPRVLVDGFE+AKRATLQFLEKFKTPV+MGDEPDKEILKMVARTTLRTKL
Sbjct: 113 ---------MHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTKL 163
Query: 181 YEALADQLTDIVVNAV----SLRTSVDFFFFQVFKGKSK 215
YEA+ADQLTDIVVNAV +D F ++ + K
Sbjct: 164 YEAMADQLTDIVVNAVLCIRKPEEGIDLFMVEIMHMRHK 202
>GSVIVT01007770001 assembled CDS
Length = 557
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 20/182 (10%)
Query: 16 SAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIM 75
S H NI A+K + D+++T LGP+ +KML+ G I +T DGN++L+E+ + +P A
Sbjct: 18 SKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDGNSILRELDLAHPAAKS 77
Query: 76 IARTAVAQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVL 135
+ + QD+ GDGTTS ++ GE++ +E +ID+ HP V+
Sbjct: 78 MIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKN-----------------FHPTVI 120
Query: 136 VDGFEVAKRATLQFLEKFKTPVIMGDEPDKEILKMVARTTLRTKLYEALADQLTDIVVNA 195
+ A + L+K PV + D +L MV ++ + TK D + D+ ++A
Sbjct: 121 CRAYNKALEDAIAVLDKIAAPVDVNDR--VAMLGMV-KSCIGTKFTGQFGDLIADLALDA 177
Query: 196 VS 197
+
Sbjct: 178 TT 179
>GSVIVT01000266001 assembled CDS
Length = 557
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 21/189 (11%)
Query: 16 SAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIM 75
S H NI A+K + D+++T LGP+ +KML+ G I +T DGN +L+E+ + +P A
Sbjct: 18 SKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDGNAILRELDLAHPAAKS 77
Query: 76 IARTAVAQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVL 135
+ + QD+ GDGTTS ++ GE++ +E +ID+ HP V+
Sbjct: 78 MIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKS-----------------YHPTVI 120
Query: 136 VDGFEVAKRATLQFLEKFKTPVIMGDEPDKEILKMVARTTLRTKLYEALADQLTDIVVNA 195
+ A + L+K + D D+ + + ++ + TK D + D+ ++A
Sbjct: 121 CRAYNKALEDAIAVLDKIAMSI---DVKDRSTVLGLVKSCIGTKFTSQFGDLIADLAIDA 177
Query: 196 VSLRTSVDF 204
++ VD
Sbjct: 178 -TMTVGVDL 185
>GSVIVT01020856001 assembled CDS
Length = 535
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A NI+A K + +L+T+LGPKG K+L GD+ +T DG T+L++M + N A ++
Sbjct: 29 AQKANISAGKAVARILRTSLGPKGMDKILQSPDGDVTITNDGATILEQMDVDNQIAKLMV 88
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVD 137
+ +QD GDGTT V+ G L++Q+E ++ G +HP + +
Sbjct: 89 ELSRSQDYEIGDGTTGVVVLAGALLEQAEGLLERG-----------------IHPIRVAE 131
Query: 138 GFEVAKRATLQFLEKFKTPVIMGDEPDKEILKMVARTTLRTKLYEALADQLTDIVVNAV 196
G+E+A R ++ LE G + E L TTL +K+ L +I V AV
Sbjct: 132 GYEMACRIAVEHLEHIAQKFEFG-VTNIEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAV 189
>GSVIVT01008708001 assembled CDS
Length = 527
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 36/197 (18%)
Query: 26 AKGLQDVLKTNLGPKGTIKML--VGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQ 83
A + D++KT LGPKG K+L G + +T DG T+LK + I NP A ++ + Q
Sbjct: 27 AMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGATILKSLHIDNPAAKVLVDISKVQ 86
Query: 84 DDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVDGF---- 139
DD GDGTTS V+ GEL++++E+ VA + HP ++ G+
Sbjct: 87 DDEVGDGTTSVVVLAGELLREAEK---------LVAAKI--------HPMTIISGYRMAA 129
Query: 140 EVAKRATLQFLEKFKTPVIMGDEPDKEILKM----VARTTLRTKLYEALADQLTDIVVNA 195
E A+ A LQ +M ++ D E K+ +A TTL +K+ + + V+A
Sbjct: 130 ECARNALLQ--------KVMDNKEDAEKFKLDLMKIAMTTLSSKILSQDKEHFAKLAVDA 181
Query: 196 V-SLRTSVDFFFFQVFK 211
V L+ S + Q+ K
Sbjct: 182 VMRLKGSTNLESIQIIK 198
>GSVIVT01018213001 assembled CDS
Length = 546
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 95/176 (53%), Gaps = 21/176 (11%)
Query: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
N+ A + + +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A
Sbjct: 24 NVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAE 83
Query: 82 AQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVDGFEV 141
QD GDGTTS VI EL+K++ + + +HP ++ G+ +
Sbjct: 84 LQDREVGDGTTSVVIVAAELLKRANDLV-----------------RNKIHPTSIISGYRL 126
Query: 142 AKRATLQFL-EKFKTPVIMGDEPDKEILKMVARTTLRTKLYEALADQLTDIVVNAV 196
A R +++ EK V ++ K+ L A+T++ +KL +D +VV+AV
Sbjct: 127 AMREACKYVDEKLAVKV---EKLGKDSLINCAKTSMSSKLIAGDSDFFASLVVDAV 179
>GSVIVT01002278001 assembled CDS
Length = 562
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 94/182 (51%), Gaps = 20/182 (10%)
Query: 17 AALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMI 76
A L NI+A + DV++T LGP+G K++ G+ ++ DG T++K + I +P A ++
Sbjct: 23 AQLVSNISACTVVADVVRTTLGPRGMDKLIHDDKGNTTISNDGATIMKLLDIVHPAAKIL 82
Query: 77 ARTAVAQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLV 136
A +QD GDGTT+ V+ GE +K+++ +I++G +HP+ L+
Sbjct: 83 VDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDG-----------------VHPQNLI 125
Query: 137 DGFEVAKRATLQFLEKFKTPVIMGD--EPDKEILKMVARTTLRTKLYEALADQLTDIVVN 194
+ A ++ +++ I G E K +L A TTL +KL + +VV+
Sbjct: 126 RSYRTASYLAIEKIKELAVS-IEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVD 184
Query: 195 AV 196
+V
Sbjct: 185 SV 186
>GSVIVT01033394001 assembled CDS
Length = 545
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Query: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
A+ NI+A K L + +T+LGP G KM++ I +T D T++ E+++Q+P A ++
Sbjct: 27 AVLKNIDACKQLSVITRTSLGPNGMNKMVINHLDKIFVTNDAATIVNELEVQHPAAKILV 86
Query: 78 RTAVAQDDISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALNLIIGLLHCMHPRVLVD 137
+ AQ + GDG T+ F GEL++ +E I G +HP ++
Sbjct: 87 LASKAQQEEIGDGANLTISFAGELLQNAEELIRMG-----------------LHPSEIIS 129
Query: 138 GFEVAKRATLQFLEKF 153
G+ A T++ LE+
Sbjct: 130 GYSKAINKTVEILEEL 145
>GSVIVT01000590001 assembled CDS
Length = 480
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 45 MLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQ 104
ML GD+ +T DG T+L++M + N A ++ + +QD GDGTT V+ G L++Q
Sbjct: 1 MLQSPDGDVTITNDGATILEQMDVDNQIAKLVVELSRSQDYEIGDGTTGVVVMAGALLEQ 60
Query: 105 SERYIDEGCFKFFVALNLIIGLLHCMHPRVLVDGFEVAKRATLQFLEKFKTPVIMGDEPD 164
+ER ++ G +HP + +G+E+A R ++ LE G +
Sbjct: 61 AERLLERG-----------------IHPIRISEGYEMASRIAVEHLEHIAQKFDFG-VTN 102
Query: 165 KEILKMVARTTLRTKLYEALADQLTDIVVNAV 196
E L TTL +K+ L +I V AV
Sbjct: 103 IEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAV 134
>GSVIVT01025490001 assembled CDS
Length = 608
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPT----AIMIARTAVAQD 84
L D++ LGPKG +L G K+ DG T+ KE+++++P A ++ + A +
Sbjct: 86 LADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 145
Query: 85 DISGDGTTSTVIFIGELMKQSERYIDEGCFKFFV 118
D++GDGTT++V+ L+ + + + G +
Sbjct: 146 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLI 179
>GSVIVT01017032001 assembled CDS
Length = 609
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPT----AIMIARTAVAQD 84
L D++ LGPKG +L G K+ DG T+ +E+++++P A ++ + A +
Sbjct: 87 LADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENIGARLVRQAASKTN 146
Query: 85 DISGDGTTSTVIFIGELMKQSERYIDEGC 113
D++GDGTT++V+ L+ + + + G
Sbjct: 147 DLAGDGTTTSVVLAQGLITEGVKVVAAGA 175
>GSVIVT01029025001 assembled CDS
Length = 575
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQ----IQNPTAIMIARTAVAQD 84
L D ++ +GPKG +L G K+TKDG T+ K ++ I+N A ++ + A A +
Sbjct: 54 LADAVRVTMGPKGRNVVLEQSFGAPKVTKDGVTVAKSIEFKDRIKNVGASLVKQVANATN 113
Query: 85 DISGDGTTSTVIFIGELMKQSERYIDEGCFKFFVALN 121
D++GDGTT + + EGC +N
Sbjct: 114 DVAGDGTTCATVL-------TRAIFTEGCKSVAAGMN 143