Jatropha Genome Database

JcCB0040361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0040361.10 + phase: 0 
         (165 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01035071001 assembled CDS                                       130   3e-31
GSVIVT01035074001 assembled CDS                                       127   2e-30
GSVIVT01035072001 assembled CDS                                       124   2e-29
GSVIVT01035062001 assembled CDS                                       112   1e-25
GSVIVT01035060001 assembled CDS                                       111   2e-25
GSVIVT01035055001 assembled CDS                                       110   2e-25
GSVIVT01035059001 assembled CDS                                       110   3e-25
GSVIVT01035061001 assembled CDS                                       109   5e-25
GSVIVT01035076001 assembled CDS                                        97   5e-21
GSVIVT01035066001 assembled CDS                                        91   3e-19
GSVIVT01035069001 assembled CDS                                        87   4e-18
GSVIVT01035054001 assembled CDS                                        85   2e-17
GSVIVT01035075001 assembled CDS                                        85   2e-17
GSVIVT01028061001 assembled CDS                                        66   8e-12
GSVIVT01035068001 assembled CDS                                        48   3e-06

>GSVIVT01035071001 assembled CDS
          Length = 159

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 104/165 (63%), Gaps = 7/165 (4%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG++S E +   SI  AKIF+  +L+++  + KV+P AI     ++GDGGPG++++ITF 
Sbjct: 1   MGVISYEHEIISSIPPAKIFKAFILDSDNLIPKVLPQAIKCVEIIEGDGGPGSIKKITFG 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +G   +YVK  VD +DKENF + Y++I GD AL+ T  +E +S+ V    SP+GG+ICK 
Sbjct: 61  EGSQFNYVKHRVDGIDKENFTYSYSVIEGD-ALMGT--LESISYEVKLVASPSGGSICKS 117

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPDA 165
           + K +     E+ ED+I+A  E       G  K  EAY LANPDA
Sbjct: 118 TSKYHTKGDFEITEDQIKAGKEKA----LGLFKAVEAYLLANPDA 158


>GSVIVT01035074001 assembled CDS
          Length = 158

 Score =  127 bits (319), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 101/165 (61%), Gaps = 7/165 (4%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+V+   +    + A ++F+ ++LE ++ L K+VP AI +   ++G+GGPGT++Q+ F 
Sbjct: 1   MGVVTYTDELTSPVPAPRLFKALILEADSLLPKIVPQAIKSIETVEGNGGPGTIKQLNFA 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +G    YVK  +D +DKE  I+ YT+I GD AL+D   IE +S+ ++FE SP GG   K 
Sbjct: 61  EGSQFKYVKHRIDELDKEKMIYKYTLIEGD-ALMDK--IEYISYEISFEASPDGGCKSKN 117

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPDA 165
               +   GVE+KE+EI+   E    VF    K  EAY LANPDA
Sbjct: 118 VSVYHSKPGVEIKEEEIKDGKEKAAAVF----KAVEAYLLANPDA 158


>GSVIVT01035072001 assembled CDS
          Length = 159

 Score =  124 bits (310), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 99/165 (60%), Gaps = 7/165 (4%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG ++ E +   SI  AK+F+  VL+ +  + KV+P AI     ++GDGGPGT+++I F 
Sbjct: 1   MGAITYEMEVTSSIPPAKMFKAFVLDVDNLIPKVLPQAIKCVEIIEGDGGPGTIKKINFG 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +G   +YVK  +D +DKENF + YTII GD AL+D   +E + + V    SP GG+ICK 
Sbjct: 61  EGSQFNYVKHWIDSLDKENFTYCYTIIEGD-ALMDN--LESIYYEVKLVASPDGGSICKN 117

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPDA 165
             K +    +++ ED+I+A  E       G  K  EAY LANPDA
Sbjct: 118 ISKYHTKGDIQITEDQIKAGKEKA----MGMFKAIEAYLLANPDA 158


>GSVIVT01035062001 assembled CDS
          Length = 159

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 7/165 (4%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+ + E +   SI  AK+F+  +L+++  + KV P AI +   +QG+GGPGT+++I F 
Sbjct: 1   MGVFTYESEVTSSIPPAKMFKAAILDSDNLIPKVRPQAIKSVEIIQGEGGPGTIKKIHFG 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +G     +   VD +DKENF F YT++ GD   + T  IE +S  +    SP GG+I K 
Sbjct: 61  EGSKFKSMTHRVDAIDKENFTFSYTVVDGD---VLTGGIESISHELKVVASPDGGSIYKN 117

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPDA 165
           + K +    VE+ E+ I+   E    +F    K  EAY LA+PDA
Sbjct: 118 TSKYHTKGDVEISEEHIKGGKEEALALF----KAIEAYVLAHPDA 158


>GSVIVT01035060001 assembled CDS
          Length = 159

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 7/165 (4%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+ + E +   S+  AK+F+  +L+++  + K+ P  I +   LQG GGPGT+++I F 
Sbjct: 1   MGVFTYESEVTSSVPPAKMFKAAILDSDNLIPKIRPQDIKSVEILQGQGGPGTIKKIHFG 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +G     +   VD +DKENF F YT+I GD   + T+ IE +S  V    SP GG I K 
Sbjct: 61  EGRKFKSMTHRVDAIDKENFSFSYTVIDGD---VLTSGIESLSHEVKVVASPDGGCIFKN 117

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPDA 165
           + K +   GVE+ E+ ++   E +  +F    K  EAY LA+PDA
Sbjct: 118 TKKYHTKAGVEISEEHVKGGKEESLALF----KAIEAYLLAHPDA 158


>GSVIVT01035055001 assembled CDS
          Length = 159

 Score =  110 bits (276), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 7/165 (4%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+ + E +   S+  AK+F+  +L+++  + KV P AI +   +QG+GGPGT+++I F 
Sbjct: 1   MGVFTYESEVTSSVPPAKMFKAAILDSDNLIPKVRPQAIKSVETIQGEGGPGTIKKIHFG 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +G     +   VD +DKENF F YT++ GD   + T  IE +S  +    SP GG+I K 
Sbjct: 61  EGSKFKSMTHRVDAIDKENFTFSYTVVDGD---VLTGGIESISHELKVVASPDGGSIYKN 117

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPDA 165
           + K +    VE+ E+ ++   E    +F    K  EAY LA+PDA
Sbjct: 118 TSKYHTKGDVEICEEHVKGGKEEALALF----KAIEAYVLAHPDA 158


>GSVIVT01035059001 assembled CDS
          Length = 159

 Score =  110 bits (276), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 7/165 (4%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+ + E +   S+  AK+F+  +L+++  + K+ P  I +   LQG GGPGT+++I F 
Sbjct: 1   MGVFTYESEVTSSVPPAKMFKAAILDSDNLIPKIRPQDIKSVEILQGQGGPGTIKKIHFG 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +G     +   VD +DKENF F YT+I GD   + T+ IE +S  +    SP GG I K 
Sbjct: 61  EGRKFKSMTHRVDAIDKENFTFSYTVIDGD---VLTSGIESISHELKVVASPDGGCIYKN 117

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPDA 165
           + K +   GVE+ E+ ++   E +  +F    K  EAY LA+PDA
Sbjct: 118 TKKYHTKAGVEISEEHVKGGKEESLALF----KAIEAYVLAHPDA 158


>GSVIVT01035061001 assembled CDS
          Length = 159

 Score =  109 bits (273), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 94/165 (56%), Gaps = 7/165 (4%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+ + E +   S+  AK+F+  +L+++  + K+ P  I +   LQG GGPGT+++I F 
Sbjct: 1   MGVFTYESEVTSSVPPAKMFKASILDSDNLIPKIRPQDIKSVEILQGQGGPGTIKKIHFG 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +G     +   +D +DKENF F YT+I GD   + T+ IE +S  +    SP GG I K 
Sbjct: 61  EGRKFKSMTHRIDAIDKENFSFSYTVIDGD---VLTSGIESISHELKVVASPDGGCIYKN 117

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPDA 165
           + K +   GVE+ E+ ++   E +  VF    K  EAY LA+PDA
Sbjct: 118 TKKYHTKAGVEISEEHVKGGKEESLAVF----KAIEAYILAHPDA 158


>GSVIVT01035076001 assembled CDS
          Length = 159

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 8/163 (4%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+ S   +    I  ++IF+ ++L++   + K++P  I +   +QGDGG GT+ Q+ F 
Sbjct: 1   MGVTSFTQEFTCPIAPSRIFKALILDSNNLIPKLLPQTIRSIDVVQGDGGAGTIEQVNFT 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +   + YVK  ++ +DKENF+  Y +I GD   +    +E ++  V FE +  GG+ICK 
Sbjct: 61  EASNLKYVKHQIEELDKENFVCKYRMIEGD---VLGEELESIAHEVKFE-AADGGSICKM 116

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANP 163
           + + +     E+KE+EI+A          G  K+ EAY L NP
Sbjct: 117 ASEYHTKGKFEIKEEEIKAGKARA----MGIYKVVEAYLLENP 155


>GSVIVT01035066001 assembled CDS
          Length = 132

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 34/165 (20%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+++ E +   SI  AK+F+  VL+ +  + K++P AI N   +QGDGGPGT+++I F 
Sbjct: 1   MGVITYEMEVTSSIPPAKMFKASVLDADNLIPKILPQAIKNVEIIQGDGGPGTIKKIYFG 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +G     V   VD +DKENF + Y                               +ICK 
Sbjct: 61  EGSQFKSVTHRVDGIDKENFTYSYR------------------------------SICKN 90

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPDA 165
             K +  D   + E++I+A  E  +    G  K  EAY LANPDA
Sbjct: 91  ISKYHTKDDAVIDEEQIKAGKEKAS----GMFKAIEAYLLANPDA 131


>GSVIVT01035069001 assembled CDS
          Length = 109

 Score = 87.0 bits (214), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 73/106 (68%), Gaps = 3/106 (2%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+++ E +   SI  AK+F+  +L+++  + K++P AI +   ++GDGGPG++++ITF 
Sbjct: 1   MGVITYEHEITSSIPPAKMFKAFILDSDKLIPKILPQAIKSTEIIEGDGGPGSIKKITFR 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHV 106
           +G   +YVK  VD +DKENF + Y++I GD AL+ T  +E +S+ V
Sbjct: 61  EGSQFNYVKHRVDGIDKENFTYTYSVIEGD-ALMGT--LESISYEV 103


>GSVIVT01035054001 assembled CDS
          Length = 160

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 85/164 (51%), Gaps = 7/164 (4%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+ +   +    +  A++F+ +V+++   + ++VP ++ +   ++GDGG G++ Q  F 
Sbjct: 1   MGVTTFTQEFVTPVSPARMFKALVVDSHILVPRLVPESVKSIEFVEGDGGAGSITQTNFS 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
                 Y+K  ++ VDKE     YT+I G    +  + +E + + + FE S  GG ICK 
Sbjct: 61  GDSDCEYLKYKINAVDKEKLECRYTLIEGG---VLGDQLESIVYEMKFEESGDGGCICKT 117

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPD 164
             + +     E+KE+ IR   E       G  KL EAY LANPD
Sbjct: 118 RSEYHTKGEFEIKEESIREGKEKA----MGVYKLVEAYLLANPD 157


>GSVIVT01035075001 assembled CDS
          Length = 161

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 86/165 (52%), Gaps = 6/165 (3%)

Query: 1   MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
           MG+     +    +   ++F+ ++L++     K++  +I +   L+G+G  G+++QI F 
Sbjct: 1   MGVTRLSQKYATHVTPGRMFKALILDSHNLCPKLMFSSIKSIEFLEGEGEVGSIKQINFT 60

Query: 61  QGGPVSYVKETVDVVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
           +  P++Y+K  +D +DKE     YT+   D  ++D   IE +++ V FE    GG +C  
Sbjct: 61  EASPLTYMKHRIDALDKEKLTCTYTMFETDALIMDK--IEYITYDVKFEPYGFGGCVCNL 118

Query: 121 SGKAYIIDGVEVKEDEIRADLEHTTQVFFGTLKLYEAYALANPDA 165
           +        VE++E+    D+EH      G  ++ EAY +A+P A
Sbjct: 119 TSVYKTKGDVEIREE----DIEHGKDRAIGMYEVLEAYLMAHPRA 159


>GSVIVT01028061001 assembled CDS
          Length = 163

 Score = 65.9 bits (159), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 4/107 (3%)

Query: 14  IRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFVQGGPVSYVKETVD 73
           I  A +F+ +++++   +  ++P +I +   ++GDGG G+++Q  F +G    Y+K  +D
Sbjct: 61  IAPAIMFKALIVDSHNLVPTLMP-SIKSIEFVEGDGGVGSIKQTNFPEGSHFKYLKHRID 119

Query: 74  VVDKENFIFDYTIIGGDPALIDTNLIEKMSFHVTFEISPTGGTICKR 120
            +D +N+   YT+I G+  L DT  +E +S+ V FE S +G  +C R
Sbjct: 120 AIDHDNYSCKYTLIEGE-VLGDT--LESISYEVKFEASGSGSGLCAR 163


>GSVIVT01035068001 assembled CDS
          Length = 86

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 39/62 (62%)

Query: 1  MGIVSCEGQTELSIRAAKIFRMVVLETETYLSKVVPGAIANFVNLQGDGGPGTLRQITFV 60
          MG+++ E +   SI  AK+F+  VL+ +  + K++P  I     ++GDGG G ++++TF 
Sbjct: 1  MGVITYENEITSSIPPAKMFKAFVLDVDKLIPKILPQTIKCVEIIEGDGGAGIIKKVTFG 60

Query: 61 QG 62
          +G
Sbjct: 61 EG 62