Jatropha Genome Database
- JcCB0025591.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0025591.20 - phase: 0 /partial
(548 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01025749001 assembled CDS 538 e-153
GSVIVT01025748001 assembled CDS 536 e-153
GSVIVT01010025001 assembled CDS 307 9e-84
GSVIVT01011756001 assembled CDS 270 1e-72
GSVIVT01031663001 assembled CDS 239 3e-63
GSVIVT01019126001 assembled CDS 180 2e-45
GSVIVT01011347001 assembled CDS 174 8e-44
GSVIVT01008430001 assembled CDS 170 1e-42
GSVIVT01019110001 assembled CDS 162 5e-40
GSVIVT01029266001 assembled CDS 145 6e-35
GSVIVT01011755001 assembled CDS 144 2e-34
>GSVIVT01025749001 assembled CDS
Length = 557
Score = 538 bits (1385), Expect = e-153, Method: Compositional matrix adjust.
Identities = 312/561 (55%), Positives = 359/561 (63%), Gaps = 117/561 (20%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI+ DLY VLT+VVPLYVAMILAYGSV+WWKIFSPDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MIAITDLYHVLTSVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
TNDPYAMN+RFIAADTLQKII+LV L IW+ + G LEW IT+FSLSTLPNTLVMGIPL
Sbjct: 61 TNDPYAMNYRFIAADTLQKIIVLVVLAIWSRVSSRGCLEWSITLFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
L MYGEYSG+LMVQ+VVLQCIIWYTL+LFLFEYRGA++LI+EQFP+TA SI+SF+VDSD
Sbjct: 121 LKGMYGEYSGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFRVDSD 180
Query: 181 VVSLDGQDFLETDAEIGDDGKLHVTVRKSNASR------RSLGPGSFSALTPRPSNLTGA 234
V+SLDG++ L+T+AE+G+DGKLHVTVRKS +SR RS GP S +LTPRPSNLT
Sbjct: 181 VISLDGKEPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGVSLTPRPSNLTN- 239
Query: 235 EIYSLSSSRNPTPRGSNFNTSDFYNMMGVQGFPGGRLSNFGPADLYSVQSSRGPTPRPSN 294
A++YS+QSSR PTPR S+
Sbjct: 240 ------------------------------------------AEIYSLQSSRNPTPRGSS 257
Query: 295 FEENCAPMATISSPRFGFYPAQTVPTSYPAP-NPEFSSTVSTKNTKNXXXXXXXXXXXXX 353
F FY ++ YPAP + S V K
Sbjct: 258 FNHT------------DFY---SMGGGYPAPPSAGIFSPVGGPGAKK------------- 289
Query: 354 XXXXXNTKAN--HDAKELHMFVWSSSASPVSD----VFGGNDFGAPQQPGRSDQGAKEIR 407
KAN K+LHMFVWSSSASPVS+ VF G D+G G Q K+
Sbjct: 290 -------KANGADGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNEVAGGVLPQ-TKDYD 341
Query: 408 MLVADHPQNGESKAIANAGDFPGEDFSFAXXXXXXXXXXXXXXAPGLNKLGSSSTAELHP 467
D G ++ +AN GD G S KLGSSSTAEL+P
Sbjct: 342 ESRQDEFSFG-NRPVANGGDREGAMMS---------------------KLGSSSTAELNP 379
Query: 468 KVGGPPESGANKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLISFRWHVAMPK 527
K + MPPASVMTRLILIMVWRKLIRNPNTYSSLIGL WSL+SF+W + MP
Sbjct: 380 KAAAQSKP---TSMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKWGIEMPA 436
Query: 528 IIKQSISILSDAGLGMAMFSL 548
II +SISILSDAGLGMAMFSL
Sbjct: 437 IIAKSISILSDAGLGMAMFSL 457
>GSVIVT01025748001 assembled CDS
Length = 555
Score = 536 bits (1382), Expect = e-153, Method: Compositional matrix adjust.
Identities = 310/566 (54%), Positives = 359/566 (63%), Gaps = 129/566 (22%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MIS DLY VLTAVVPLYVAMILAYGSV+WWKIFSPDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1 MISITDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
TN+PYAMN+RFIAADTLQKII+LV L IW+ + G LEW IT+FSLSTLPNTLVMGIPL
Sbjct: 61 TNNPYAMNYRFIAADTLQKIIVLVVLAIWSRTSSRGCLEWSITLFSLSTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDSD 180
+ MYGE SG+LMVQ+VVLQCIIWYTL+LFLFEYRGA++LI+EQFP+TA SI+SF+VDSD
Sbjct: 121 MKGMYGEASGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFRVDSD 180
Query: 181 VVSLDGQDFLETDAEIGDDGKLHVTVRKSNASR------RSLGPGSFSALTPRPSNLTGA 234
++SLDG++ L+T+AE+G+DGKLHVTVRKS +SR RS GP S +LTPRPSNLT
Sbjct: 181 IISLDGKEPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGVSLTPRPSNLTN- 239
Query: 235 EIYSLSSSRNPTPRGSNFNTSDFYNMMGVQGFPGGRLSNFGPADLYSVQSSRGPTPRPSN 294
A++YS+QSSR PTPR S+
Sbjct: 240 ------------------------------------------AEIYSLQSSRNPTPRGSS 257
Query: 295 FEENCAPMATISSPRFGFYPAQTVPTSYPAP-NPEFSSTVSTKNTKNXXXXXXXXXXXXX 353
F FY ++ YPAP + S V+ K
Sbjct: 258 FNHT------------DFY---SMGGGYPAPPSAGIFSPVAGPGAKK------------- 289
Query: 354 XXXXXNTKAN--HDAKELHMFVWSSSASPVSD----VFGGNDFG-----APQQPGRSDQG 402
KAN K+LHMFVWSSSASPVS+ VF G D+G P + G
Sbjct: 290 -------KANGADGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNELGGVPHTKDYDEFG 342
Query: 403 AKEIRMLVADHPQNGESKAIANAGDFPGEDFSFAXXXXXXXXXXXXXXAPGLNKLGSSST 462
E ++A N GD G P ++KLGSSST
Sbjct: 343 QDEFSF---------GNRASVNGGDREG---------------------PTMSKLGSSST 372
Query: 463 AELHPKVGGPPESGANKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLISFRWH 522
ELHPK P+S MPPASVMTRLILIMVWRKLIRNPNTYSSLIGL WSL+SF+W
Sbjct: 373 TELHPKTA--PQSKPT-SMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKWE 429
Query: 523 VAMPKIIKQSISILSDAGLGMAMFSL 548
+ MP II +SISILSDAGLGMAMFSL
Sbjct: 430 IEMPAIIAKSISILSDAGLGMAMFSL 455
>GSVIVT01010025001 assembled CDS
Length = 527
Score = 307 bits (786), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 167/298 (56%), Positives = 214/298 (71%), Gaps = 27/298 (9%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MIS +D Y V+ A+VPLY AM++AYGSV+W KIFSP+QCSGINRFVA+FAVP+LSFHFIS
Sbjct: 1 MISADDFYKVMCAMVPLYFAMLVAYGSVKWCKIFSPEQCSGINRFVAVFAVPVLSFHFIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
N+PY M+ +FI ADTL K+++LV L +W K G L+W+IT+FSL+TLPNTLVMGIPL
Sbjct: 61 QNNPYEMDTKFIVADTLSKLLVLVLLSVWAILFKGG-LDWLITLFSLATLPNTLVMGIPL 119
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFP-ETAASIVSFKVDS 179
L AMYG+++ SLMVQ+VVLQCIIWYTLLLFLFEYR A +LI QFP TAASI F++D
Sbjct: 120 LNAMYGDFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATLLIKNQFPGSTAASISKFEIDG 179
Query: 180 DVVSLDGQDFLETDAEIGDDGKLHVTVRKSNASRRSLGPGSFSALTPRPSNLTGAEIYSL 239
DV+SLDG+D + T++EI +G++ V +R+S +S S +TPR SNL+GAEI+S+
Sbjct: 180 DVISLDGRDPVRTESEIDGNGRIRVRIRRSTSSAPDSALSSSMGITPRASNLSGAEIFSV 239
Query: 240 SSSRNPTPRGSNFNTSDFYNMMGVQGFPGGRLSNFGPADLYSVQSSRGPTPRPSNFEE 297
++ P P RLS + +D YS+Q PTPR SNF E
Sbjct: 240 NT---PAP------------------LHDPRLSGYASSDAYSLQ----PTPRASNFNE 272
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 60/77 (77%)
Query: 472 PPESGANKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQ 531
P + + MP VM RLIL MV RKL RNPNTYSS++GL+WSLISF+W+V MP ++K
Sbjct: 351 PKATATGQDMPRTHVMLRLILTMVGRKLSRNPNTYSSVLGLLWSLISFKWNVGMPSLVKY 410
Query: 532 SISILSDAGLGMAMFSL 548
SI I+SDAGLGMAMFSL
Sbjct: 411 SIKIISDAGLGMAMFSL 427
>GSVIVT01011756001 assembled CDS
Length = 287
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 150/187 (80%), Gaps = 9/187 (4%)
Query: 371 MFVWSSSASPVSD-----VFGGNDFGAPQQPGRSDQGAKEIRMLVADHP---QNGESKAI 422
MFVWSSSASPVS+ VFGG DFGA +Q GRSDQGAKEIRMLVADHP QNGESKAI
Sbjct: 1 MFVWSSSASPVSEGGGLHVFGGTDFGAAEQSGRSDQGAKEIRMLVADHPPHPQNGESKAI 60
Query: 423 ANAGDFPGEDFSFAXXXXXXXXXXXXXXAP-GLNKLGSSSTAELHPKVGGPPESGANKQM 481
A DF GEDF+F P GL+KLGSSSTAELHPK+ G PESGA KQM
Sbjct: 61 PEAEDFGGEDFTFVGNRGVEGEEEREKEGPIGLSKLGSSSTAELHPKMLGAPESGAGKQM 120
Query: 482 PPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQSISILSDAGL 541
PPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLI++RW VAMP IIKQSISILSDAGL
Sbjct: 121 PPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLIAYRWDVAMPTIIKQSISILSDAGL 180
Query: 542 GMAMFSL 548
GMAMFSL
Sbjct: 181 GMAMFSL 187
>GSVIVT01031663001 assembled CDS
Length = 463
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 138/171 (80%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MIS DLY VL+AVVPLYV M LAY SV+WW +FSPDQC+GINRFVAIFA+PLLSF IS
Sbjct: 1 MISIKDLYGVLSAVVPLYVTMFLAYASVKWWNVFSPDQCAGINRFVAIFAIPLLSFEVIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
+PY M+F FIAAD + K+++L+ L W F+K GSL+W IT+FS+STLPNTLVMGIPL
Sbjct: 61 RINPYKMDFLFIAADGVSKVLILIILFSWAKFSKRGSLDWTITLFSISTLPNTLVMGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAAS 171
L +MYG+ L++Q VVLQCIIWYTLLLFLFEYR A++ I+ +F +++ S
Sbjct: 121 LKSMYGDDKEYLIIQAVVLQCIIWYTLLLFLFEYREARIFILNKFKDSSVS 171
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%)
Query: 478 NKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQSISILS 537
N +S M + I+ VW KL+RNPN+Y+S++GL W+L S RW + P+I++ S++ILS
Sbjct: 293 NMDSSTSSAMLKQIMKRVWFKLVRNPNSYASVLGLAWALASCRWDIKKPQILENSVTILS 352
Query: 538 DAGLGMAMFSL 548
+AGLGMAMFSL
Sbjct: 353 NAGLGMAMFSL 363
>GSVIVT01019126001 assembled CDS
Length = 356
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 111/155 (71%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI W D+Y V+ A++PLYVA++L YGSV+WW+IF+PDQC INR V F +PL +F F +
Sbjct: 1 MIGWEDVYKVVVAMLPLYVALVLGYGSVKWWRIFTPDQCDAINRLVCYFTLPLFTFEFTA 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
DP+ MN+ FI AD + K+I+++ L +W + GS W IT FSL+TL N+LV+G+PL
Sbjct: 61 HVDPFKMNYLFIGADAVSKLIIVLVLALWAKCSSKGSYCWSITSFSLATLTNSLVVGVPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYR 155
+ AMYG L+VQ V+Q IIW TLLLF+ E+R
Sbjct: 121 IKAMYGPLGVDLVVQSSVVQAIIWLTLLLFVLEFR 155
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 12/98 (12%)
Query: 455 NKLGSSSTAELHPKVGGPPESGANKQMPPASVMTRL----ILIMVWRKLIRNPNTYSSLI 510
+G S E+ P G + + V TRL ++ VW KL +NPN+Y+ +I
Sbjct: 165 TTMGDSGVIEVEP--------GKDLETNEMVVSTRLSFWSLMRKVWLKLAQNPNSYACII 216
Query: 511 GLVWSLISFRWHVAMPKIIKQSISILSDAGLGMAMFSL 548
G+VW+ I+ RWH MP I++ SI I+S AG G AMFS+
Sbjct: 217 GIVWAFIANRWHFEMPSIMEGSILIMSRAGTGTAMFSM 254
>GSVIVT01011347001 assembled CDS
Length = 357
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 108/145 (74%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MIS D+Y V+ A +PLY MILAY SV+WWKIF+P+QCSGIN+FVA F++PLLSF IS
Sbjct: 1 MISLADVYHVVAATIPLYFVMILAYISVKWWKIFTPEQCSGINKFVAKFSIPLLSFQLIS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNFTKNGSLEWMITIFSLSTLPNTLVMGIPL 120
N+PY MN R I +D LQK++ L+ L GSL W+IT SLSTLPNTL++GIPL
Sbjct: 61 ENNPYQMNMRLILSDFLQKLLALILLATIAKINSRGSLTWVITGLSLSTLPNTLILGIPL 120
Query: 121 LIAMYGEYSGSLMVQVVVLQCIIWY 145
L AMYG+ + L+ Q+VVLQ ++WY
Sbjct: 121 LKAMYGDKAAGLLSQIVVLQSLVWY 145
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 47/59 (79%)
Query: 490 LILIMVWRKLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQSISILSDAGLGMAMFSL 548
LIL +V RKL+ NPNT+++++ L+W+ I FRW+V +P ++ SISILS GLGMAMFSL
Sbjct: 199 LILRIVGRKLMMNPNTHATIVSLIWACIRFRWNVKLPGVVDDSISILSKGGLGMAMFSL 257
>GSVIVT01008430001 assembled CDS
Length = 283
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 119/191 (62%), Gaps = 32/191 (16%)
Query: 359 NTKANHDAKELHMFVWSSSASPVSDVFGGNDFGAPQQPGRSDQGAKEIRMLVADHPQNGE 418
K + ++LHMFVWSSSASPVSDVFGG+++GA +DQ KE R+ V+ G
Sbjct: 24 QQKPDEGTRDLHMFVWSSSASPVSDVFGGHEYGA------NDQNVKE-RVAVSPGKVEGH 76
Query: 419 SKAIANAGDF-PGEDFSFAXXXXXXXXXXXXXXAPGLNKLGSSSTAELHPKVGGPPESGA 477
+ N D+ +DFSF G L KVG G
Sbjct: 77 RE---NQEDYLERDDFSF-----------------GNRVLAQEMNNHEGEKVG----DGK 112
Query: 478 NKQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQSISILS 537
K MPPASVMTRLILIMVWRKLIRNPNTYSSLIGL+WSL+SF+W V MP II++SI+ILS
Sbjct: 113 AKAMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVSFKWKVQMPAIIEKSIAILS 172
Query: 538 DAGLGMAMFSL 548
DAGLGMAMFSL
Sbjct: 173 DAGLGMAMFSL 183
>GSVIVT01019110001 assembled CDS
Length = 361
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 129/222 (58%), Gaps = 24/222 (10%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI W D+Y V+ A+ PLYVA++L Y SVRWW +FS DQC+ INRF+ F P SF F S
Sbjct: 1 MIEWGDVYKVVEAMAPLYVALLLGYASVRWWHMFSSDQCAAINRFICYFIFPFYSFDFTS 60
Query: 61 TNDPYAMNFRFIAADTLQKIIMLVALGIWTNF-TKNGSLEWMITIFSLSTLPNTLVMGIP 119
DP++MN++++ AD + K I + ALG+W ++ GS W +T FSL T+ N+L +G+P
Sbjct: 61 HIDPFSMNYKYMGADIMSKFICVAALGLWCKCSSRTGSYGWFVTCFSLCTMTNSLFIGVP 120
Query: 120 LLIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAASIVSFKVDS 179
+L AMYG +L++Q V+Q II+ T+ L L E+ + + + + PE DS
Sbjct: 121 ILEAMYGRTGVNLVLQASVVQVIIYSTVFLILLEFWKSFVSLNKTIPE----------DS 170
Query: 180 DVVSLDGQDFLETDAEIGDDGKLHVTVRKSNASRRSLGPGSF 221
++ + + +D + H T S +S GP SF
Sbjct: 171 NIAPVGAAE---------EDLEGHRTTEVSESS----GPSSF 199
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 40/51 (78%)
Query: 498 KLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQSISILSDAGLGMAMFSL 548
KL++NPN Y+ ++GL+W+ +S RWH+ MPKI++ S+ I+S AG AMFSL
Sbjct: 209 KLVKNPNIYACVLGLIWAFLSKRWHIGMPKIVEGSVQIMSRAGTSTAMFSL 259
>GSVIVT01029266001 assembled CDS
Length = 437
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 139/291 (47%), Gaps = 56/291 (19%)
Query: 272 SNFGPADLYSVQSSRGPTPR----PSNFEENCAPMATISSPRFGFYPAQTVPTSYPAPNP 327
S+F D Y++ +S+ +PR A + ++ S + + +SYP PNP
Sbjct: 89 SSFNQTDFYAMFASKTASPRHGSIGGVGAGGGADVFSLQSMSGELFHGGLL-SSYPPPNP 147
Query: 328 EFSSTVSTKNTKNXXXXXXXXXXXXXXXXXXNTKANHDAKELHMFVWSSSASPVSDVFGG 387
FS + S K KELHMFVWSSSASPVS+ G
Sbjct: 148 MFSGSTSGGPKKKES----------------GGGGAMPNKELHMFVWSSSASPVSE---G 188
Query: 388 NDFGAPQQPGRSDQGAKEIRMLVADHPQNGESKAIANAGDFPGEDFSFAXXXXXXXXXXX 447
N + +D G + V + S+ + + D
Sbjct: 189 NLRHTVNRAESADFGVIDSSKAVLQQ-EIAASRGMLDFND-------------------- 227
Query: 448 XXXAPGLN--KLGSSSTAELHPKVGGPPESGANK--------QMPPASVMTRLILIMVWR 497
+P +N + + + G P SG K QMPP SVMTRLI+IMVWR
Sbjct: 228 -TISPRVNGDREADMEDGSIRTQAAGTPYSGQKKADMQAKKQQMPPTSVMTRLIMIMVWR 286
Query: 498 KLIRNPNTYSSLIGLVWSLISFRWHVAMPKIIKQSISILSDAGLGMAMFSL 548
KLIRNPNTY+SLIGL+WSL+SFRW++ MP I+ SISILSDAGLGMAMFSL
Sbjct: 287 KLIRNPNTYASLIGLIWSLVSFRWNIKMPTIVSGSISILSDAGLGMAMFSL 337
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/69 (78%), Positives = 61/69 (88%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MI D+Y VL A+VPLYVAMILAYGSVRWWKIF+P+QC+GINRFVA+FAVPLLSFHFIS
Sbjct: 1 MIRGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPEQCAGINRFVAVFAVPLLSFHFIS 60
Query: 61 TNDPYAMNF 69
ND Y MN+
Sbjct: 61 LNDIYNMNY 69
>GSVIVT01011755001 assembled CDS
Length = 110
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/70 (94%), Positives = 68/70 (97%)
Query: 1 MISWNDLYTVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
MISWNDLY VLTAV+PLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS
Sbjct: 1 MISWNDLYVVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60
Query: 61 TNDPYAMNFR 70
N+PYAMNFR
Sbjct: 61 QNNPYAMNFR 70