Jatropha Genome Database
- JcCB0025551.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0025551.30 - phase: 1 /partial
(102 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01015089001 assembled CDS 190 1e-49
GSVIVT01034027001 assembled CDS 165 3e-42
GSVIVT01016387001 assembled CDS 158 6e-40
GSVIVT01036535001 assembled CDS 98 8e-22
GSVIVT01008161001 assembled CDS 93 2e-20
GSVIVT01026498001 assembled CDS 87 2e-18
GSVIVT01009080001 assembled CDS 86 4e-18
GSVIVT01003216001 assembled CDS 80 2e-16
GSVIVT01008676001 assembled CDS 62 4e-11
GSVIVT01038360001 assembled CDS 57 1e-09
GSVIVT01012779001 assembled CDS 57 1e-09
GSVIVT01020912001 assembled CDS 57 2e-09
GSVIVT01023934001 assembled CDS 56 3e-09
GSVIVT01008502001 assembled CDS 55 7e-09
GSVIVT01032027001 assembled CDS 54 2e-08
GSVIVT01008921001 assembled CDS 53 2e-08
GSVIVT01000555001 assembled CDS 53 3e-08
GSVIVT01005930001 assembled CDS 53 3e-08
GSVIVT01004715001 assembled CDS 52 4e-08
GSVIVT01009174001 assembled CDS 47 2e-06
GSVIVT01011740001 assembled CDS 46 4e-06
>GSVIVT01015089001 assembled CDS
Length = 634
Score = 190 bits (482), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 87/102 (85%), Positives = 97/102 (95%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSEV 60
ALQSDVFVYTYD NMAKAVQGHRRFE+FKKTI+P+K+NFVKLVD+LDEGKI+W+ FSS+V
Sbjct: 533 ALQSDVFVYTYDGNMAKAVQGHRRFENFKKTISPEKMNFVKLVDDLDEGKITWKKFSSKV 592
Query: 61 KELHKDRIGAPYQREPGEFPKLEESFYANPLPGCICERTPEK 102
K+LHKDR GAPY REPGEFPKLEESFYANPLPGCICE TP+K
Sbjct: 593 KKLHKDRAGAPYLREPGEFPKLEESFYANPLPGCICETTPQK 634
>GSVIVT01034027001 assembled CDS
Length = 515
Score = 165 bits (418), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 87/102 (85%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSEV 60
AL+SDVFVYTYD NMAKAVQGHRRFE F+KTINPD+ NFV+L+D+LD G ISWE FS EV
Sbjct: 398 ALESDVFVYTYDGNMAKAVQGHRRFEGFRKTINPDRQNFVRLIDQLDGGAISWEMFSQEV 457
Query: 61 KELHKDRIGAPYQREPGEFPKLEESFYANPLPGCICERTPEK 102
K LH +R+GAPY R+ GE P+LEE+F+ANP PGC+C ++ E+
Sbjct: 458 KSLHTNRLGAPYLRQAGESPRLEENFFANPFPGCVCNKSQEQ 499
>GSVIVT01016387001 assembled CDS
Length = 457
Score = 158 bits (399), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 70/98 (71%), Positives = 82/98 (83%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSEV 60
A++SDVFVYTYD NMAKAVQGHRRFE F+KTINPD NFV+L+D+ D G +SWE FSS+V
Sbjct: 355 AVESDVFVYTYDGNMAKAVQGHRRFEGFRKTINPDTRNFVRLIDKWDNGTLSWEKFSSKV 414
Query: 61 KELHKDRIGAPYQREPGEFPKLEESFYANPLPGCICER 98
+ LH +R GAPY R PGE PK EE+FYANPLPGCIC +
Sbjct: 415 RFLHANRTGAPYHRMPGESPKQEENFYANPLPGCICNK 452
>GSVIVT01036535001 assembled CDS
Length = 520
Score = 97.8 bits (242), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSEV 60
+L+SD+FV TYD NMAK V+GHRRF FKKTI D+ V LVDE G +SW+ FSS V
Sbjct: 419 SLESDIFVPTYDGNMAKVVEGHRRFLGFKKTIQLDRRLLVNLVDEYKNGSLSWDEFSSTV 478
Query: 61 KELHKDRIGAPYQREP-GEFPKLEESFYANP 90
KE H R+G+P +R + PK E+ FY+NP
Sbjct: 479 KEAHAYRVGSPSRRVVIPDRPKEEDYFYSNP 509
>GSVIVT01008161001 assembled CDS
Length = 514
Score = 93.2 bits (230), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSEV 60
+L+SD+FV TYD NMAK V+GHRRF FKKTI D+ V L+D+ +G +SW+ FSS V
Sbjct: 409 SLESDIFVPTYDGNMAKVVEGHRRFLGFKKTILLDRRLLVDLIDQYTKGSLSWDEFSSAV 468
Query: 61 KELHKDRIGAPYQR-EPGEFPKLEESFYANP 90
KE H DR+G P +R + PK E+ FYANP
Sbjct: 469 KESHGDRMGNPIKRLVIPDRPKEEDYFYANP 499
>GSVIVT01026498001 assembled CDS
Length = 499
Score = 86.7 bits (213), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 10/105 (9%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKI-SWETFSSE 59
+++SDVF+ ++ NMA+AV+GHRRF KTI PD+ V + D+L+ G++ + S
Sbjct: 391 SIESDVFIPSHSGNMARAVEGHRRFLGHGKTITPDRKGLVDIFDKLEAGQLKEGSSLSYL 450
Query: 60 VKELHKDRIGAPYQREPGEFP--------KLEESFYANPLPGCIC 96
V ++HK+R GAP +R G P + EESFY NP P CIC
Sbjct: 451 VTQMHKNRQGAPRKRG-GSLPGVKGRARFRTEESFYENPYPECIC 494
>GSVIVT01009080001 assembled CDS
Length = 536
Score = 85.5 bits (210), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/109 (40%), Positives = 71/109 (65%), Gaps = 9/109 (8%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVN-FVKLVDELDEGKI-SWETFSS 58
+++SDVF+ +Y NMA+AV+GHRRF +KTI+PD+ + V L D+++ G + + S+
Sbjct: 418 SVESDVFIPSYSGNMARAVEGHRRFLGHRKTISPDRQDSLVHLFDKIERGSLKEGKNLSN 477
Query: 59 EVKELHKDRIGAPYQRE-PGEFPK------LEESFYANPLPGCICERTP 100
++ ELH+ R G+P +R+ P K EE+FY NP+P C+C + P
Sbjct: 478 KIMELHRKRQGSPRKRKGPISGTKGMDRFRSEEAFYVNPIPDCLCHKEP 526
>GSVIVT01003216001 assembled CDS
Length = 504
Score = 80.1 bits (196), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSEV 60
++ S++F+ TYD NMAK V+GHRR+ F+K+I + V+L+D G +SW F V
Sbjct: 391 SISSNIFIPTYDGNMAKLVEGHRRYLGFRKSILLHRKALVELLDLHQNGTLSWSEFEVSV 450
Query: 61 KELHKDRIGAPYQREPGEFP---KLEESFYANPLPGCICERT 99
+ H R+G P +R P K E+ FYANP C+CER
Sbjct: 451 RRAHDQRMGQPTRRR--VIPDKRKEEDYFYANP-QECLCERA 489
>GSVIVT01008676001 assembled CDS
Length = 573
Score = 62.4 bits (150), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 3 QSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSEVKE 62
+SDVFV + NMAK + G RR+ K TI P+ +L L++G SWE F+S V+
Sbjct: 407 ESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKKLSRLF--LNKGNTSWEVFASRVRI 464
Query: 63 LHKDRIGAPYQREPGEFPKLEESFYANPLPGCICERT 99
+ +G P + PG F+ NP CICE +
Sbjct: 465 YQRGFMGEPNEVRPG-----RGEFHENP-SSCICEES 495
>GSVIVT01038360001 assembled CDS
Length = 520
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 2 LQSDVFVYTYD--ENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSE 59
L SD+F+ TYD N A + GHR + F+ TI PD+ + + G+ S F +
Sbjct: 386 LLSDIFMPTYDGPSNFANNLMGHRLYYGFRTTITPDRKALAPIFIAQENGRTS--GFEAA 443
Query: 60 VKE-LHKDRIGAPYQR-EPGEFPKLEESFYANPLPGCICERTPE 101
V+ + ++G P++R P ESFY N P C C+ +P+
Sbjct: 444 VRRVMFNSKLGGPHKRVHP-------ESFYTNSWPECFCQTSPK 480
>GSVIVT01012779001 assembled CDS
Length = 492
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 2 LQSDVFVYTYDENMAKAVQGHRR--FEDFKKTINPDKVNFVKLVDELDEGKISWETFSSE 59
L S+VFV T N + GHRR + KTI PDK L D D ISW+ F S+
Sbjct: 388 LHSEVFVTTQGGNFPHFLMGHRRYLYGGHAKTIKPDKRKLALLFDSPD---ISWDNFKSQ 444
Query: 60 VKEL--HKDRIGAPYQREPGEFPKLEESFYANPLPGCICERT 99
++++ H D G+ E K S Y P+P C+C++
Sbjct: 445 MQDMLRHSDSKGS-------ELRKPSSSLYTFPMPDCMCKQA 479
>GSVIVT01020912001 assembled CDS
Length = 564
Score = 56.6 bits (135), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 2 LQSDVFVYTYD--ENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSE 59
L SD+F+ TYD N A + GHR + F+ T+ PD+ + + + G+++ F
Sbjct: 427 LLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTLRPDRKALAPIFIDRENGRLA--GFEEA 484
Query: 60 VKELHKD-RIGAPYQREPGEFPKLEESFYANPLPGCICERTPE 101
V+ + + G P++R P ESFY N P C C+ +P+
Sbjct: 485 VRRVMLNTNFGGPHKRVP------PESFYTNSWPECFCQMSPK 521
>GSVIVT01023934001 assembled CDS
Length = 613
Score = 56.2 bits (134), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 3 QSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSEVKE 62
+SDVFV + NMA+ + G RR+ K TI P+ +L ++ ++WE F+S V+
Sbjct: 455 ESDVFVTNNNGNMARMLAGRRRYFGHKPTIRPNAKKLYRLF--MNRNNMTWEEFASGVRS 512
Query: 63 LHKDRIGAPYQREPGEFPKLEESFYANPLPGCICE 97
+G P + PG F+ NP CICE
Sbjct: 513 RQIGFMGEPNEVRPG-----RGEFHENP-SSCICE 541
>GSVIVT01008502001 assembled CDS
Length = 562
Score = 55.1 bits (131), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSEV 60
+L SDVF+ ++ NM +A+QGHR + +K + PDK + ++ IS F S +
Sbjct: 463 SLSSDVFLPSHGGNMGRAMQGHRAYVGHRKFVKPDKREMIAF---FEDASISEAEFRSIM 519
Query: 61 KELHKDRIGAPYQREPGEFPKLEESFYANPLPGCICERT 99
++LH G P +R + A P+P C+C +
Sbjct: 520 RKLHSRYQGQPEKRTN---KRSTRDVIAYPVPECMCRHS 555
>GSVIVT01032027001 assembled CDS
Length = 536
Score = 53.5 bits (127), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 3 QSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVK--LVDELDEGKISWETFSSEV 60
+SDVF+ ++ NM A+QGHR + KK I P+K + L L E + F+ +
Sbjct: 440 KSDVFIPSHGGNMGHAIQGHRAYAGHKKYITPNKRQMIPYFLNSPLPEAE-----FNRVI 494
Query: 61 KELHKDRIGAPYQREPGEFPKLEESFYANPLPGCICERT 99
ELH+D G P R K P+P C+C T
Sbjct: 495 MELHRDSFGQPELRA----TKAGRDVTKYPVPECMCNST 529
>GSVIVT01008921001 assembled CDS
Length = 585
Score = 53.1 bits (126), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRR--FEDFKKTINPDKVNFVKLVDELDEGKISWETFSS 58
L S+VFV T N + GHRR F KTI PDK V L+ ++D ISW+ F +
Sbjct: 465 CLFSEVFVTTQGGNFPHFLMGHRRFLFGGHAKTIQPDKRKLVILLQDMD---ISWKAFKN 521
Query: 59 EVKEL--HKDRIGAPYQREPGEFPKLEESFYANPLPGCIC 96
E++ + DR G R + + S Y PLP C C
Sbjct: 522 EMESMLIESDRKGMNVPRIKKS--RRKSSIYTYPLPECRC 559
>GSVIVT01000555001 assembled CDS
Length = 552
Score = 52.8 bits (125), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFK-KTINPDKVNFVKLVDELDEGKISWETFSSE 59
L+SDVFV T+ N AK + G RR+ + K+I PDK K + + W TF +
Sbjct: 463 CLKSDVFVMTHGGNFAKLIIGARRYMGHQLKSIKPDKGLMSK---SFGDPYMGWATFVED 519
Query: 60 VKELHKDRIGAPYQREPGEFPKLEESFYANPLPGCICE 97
V H+ R G P + FP + + NPL C+C
Sbjct: 520 VVVTHQTRTGLPEE----TFPNYD--LWENPLTPCMCR 551
>GSVIVT01005930001 assembled CDS
Length = 510
Score = 52.8 bits (125), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGK-ISWETFSSE 59
++ SD+F+ NM A+ GHR +E+ KTI P+ + L+ +L K I W F
Sbjct: 423 SMHSDIFISASPGNMHNALVGHRTYENL-KTIRPN----MALLGQLFLNKSIGWSEFQQA 477
Query: 60 VKELHKDRIGAPYQREPGEFPKLEESFYANPLPGCIC 96
V E H++R G R K E+S Y P P C+C
Sbjct: 478 VVEGHENRQGQIRLR------KSEQSLYTYPAPDCMC 508
>GSVIVT01004715001 assembled CDS
Length = 572
Score = 52.4 bits (124), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 3 QSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGKISWETFSSEVKE 62
+SDVFV + NMAK + G RR+ K+TI P+ L + K+ W+TF+ +VK
Sbjct: 423 ESDVFVTNNNGNMAKILAGRRRYMGHKRTIRPNAKKLSALF--MARNKMDWDTFAKKVKS 480
Query: 63 LHKDRIGAPYQREPGEFPKLEESFYANPLPGCICER 98
+ +G EP E F+ P C+C +
Sbjct: 481 YQRGFMG-----EPDEMRSGRGEFHEFPY-SCVCHK 510
>GSVIVT01009174001 assembled CDS
Length = 515
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 1 ALQSDVFVYTYDENMAKAVQGHRRFEDFKKTINPDKVNFVKLVDELDEGK-ISWETFSSE 59
++ SD+F+ NM A+ GHR +++ KTI P+ + L+ +L K I W F
Sbjct: 428 SMHSDIFISASPGNMHNALVGHRAYKNL-KTIRPN----MALLGQLFLNKSIEWSEFQQA 482
Query: 60 VKELHKDRIGAPYQREPGEFPKLEESFYANPLPGCICE 97
V HK R G F K +S Y P+ C+C+
Sbjct: 483 VLNGHKSRQGQI------RFRKENQSIYTYPITDCMCQ 514
>GSVIVT01011740001 assembled CDS
Length = 561
Score = 45.8 bits (107), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 2 LQSDVFVYTYDENMAKAVQGHRR--FEDFKKTINPDKVNFVKLVDELDEGKISWETFSSE 59
L S+VFV T N + GHRR + KT+ PDK KL D I W++F +
Sbjct: 459 LHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTVRPDK---RKLALLFDNPNIGWKSFKRQ 515
Query: 60 VKEL--HKDRIGAPYQREPGEFPKLEESFYANPLPGCIC 96
+ + H D G E + +S Y P P C+C
Sbjct: 516 MLNMRAHSDAKGF-------ELKRPNDSIYTFPCPDCMC 547