Jatropha Genome Database
- JcCB0017941.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0017941.10 + phase: 0 /pseudo/partial
(688 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01035095001 assembled CDS 766 0.0
GSVIVT01035853001 assembled CDS 105 5e-23
GSVIVT01023350001 assembled CDS 105 8e-23
GSVIVT01008734001 assembled CDS 104 1e-22
GSVIVT01027587001 assembled CDS 102 5e-22
GSVIVT01016876001 assembled CDS 102 7e-22
GSVIVT01019879001 assembled CDS 97 2e-20
GSVIVT01015542001 assembled CDS 79 5e-15
GSVIVT01015543001 assembled CDS 77 2e-14
GSVIVT01005195001 assembled CDS 75 1e-13
GSVIVT01017317001 assembled CDS 63 4e-10
>GSVIVT01035095001 assembled CDS
Length = 1121
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/565 (66%), Positives = 435/565 (76%), Gaps = 20/565 (3%)
Query: 125 MKDELDRQKYPRMPWHDVHCALWGPPCRDVARHFVQRWNHAKRSKAPNEKTIXXXXXXXX 184
MKDELDR KYPRMPWHDVHCALWGPPCRDVARHFVQRWN+AKR+KAPNE+ I
Sbjct: 576 MKDELDRGKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPNEQAIPLLMPQQH 635
Query: 185 XXXXXXXGRSKDMDIEKKNAEENEKDIARQDCFS-LSPLQDVPLLLPQEADAAVPASVDQ 243
GRS++M++EKKN E N KDI + D FS S QD+PLLLPQE D +
Sbjct: 636 MVIPHYMGRSREMEVEKKNVENNYKDIKKLDSFSSRSSFQDIPLLLPQEPDGLDSPHGES 695
Query: 244 KLTTEYKTKDTLDQPTGFCGRSIFSFQKSKVEGLVPDSPVKDLVDELDFLDLQSSSQISD 303
KL + + LDQPT FSF+KSK+E P D
Sbjct: 696 KLNGFDSSSNLLDQPTRVSRSLSFSFRKSKIE-----PPGMRTCDR-------------- 736
Query: 304 EWSETLEEDNHHVSAGEHGQVGPRIPCHCQVIRSVSQWSAGVGQPEESIHNAYCTLIQKA 363
EW ET E N +SA E GQVGP +PC CQVIRSVSQWSAG Q E+S HNAYC+LI+KA
Sbjct: 737 EWWETQERGNQVLSADETGQVGPCVPCRCQVIRSVSQWSAGTSQVEDSTHNAYCSLIEKA 796
Query: 364 QHFIYIENQFFISGLCGDEIIQNRVVDALYKRILQAYKEQKCFRVIVVIPLLPGFQGGLV 423
+HFIYIENQFFISGL GDEII+NRV++ LY+RI+QAY ++KCFRVI+VIPLLPGFQGGL
Sbjct: 797 EHFIYIENQFFISGLSGDEIIRNRVLEVLYRRIMQAYNDKKCFRVIIVIPLLPGFQGGLD 856
Query: 424 DGGAATVRAIMHWQYRTISREKTSILYKLSEDLGPKTHDYISFYGLRKYGRLFKDGPVAT 483
DGGAA+VRAIMHWQYRTI R SIL L + +G KTHDYISFYGLR YGRLF GPVA+
Sbjct: 857 DGGAASVRAIMHWQYRTICRGNNSILQNLYDVIGHKTHDYISFYGLRAYGRLFDGGPVAS 916
Query: 484 SQVYVHSKVMIVDDHLALIGSSNINDRSLLGSRDSEIGVVIEDKEFVDSSMNGEPWKAGK 543
SQVYVHSK+MIVDD LIGS+NINDRSLLGSRDSEIGV+IEDKE VDS M G+P KAGK
Sbjct: 917 SQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVLIEDKELVDSYMGGKPKKAGK 976
Query: 544 FTHSLRCSLWSEHLGLNAGEINKINDPVVETTYKDLWLTTAKDNTKIYQDVFACLPNDLI 603
F HSLR SLWSEHLGL GEI++I DPVV++TY+D+W+ TAK N+ IYQDVF+C+PNDLI
Sbjct: 977 FAHSLRLSLWSEHLGLRGGEIDQIKDPVVDSTYRDVWMATAKTNSTIYQDVFSCIPNDLI 1036
Query: 604 HSRAALRQSMNYWREKLSHTTIDLGIAPDKIEYHDSGEIKVINPMDKLKSIKGHLVSFPL 663
HSRAA+RQ M W+EKL HTTIDLGIAP K+E +D+G++K I PM++L+S+KGHLV FPL
Sbjct: 1037 HSRAAMRQHMAIWKEKLGHTTIDLGIAPMKLESYDNGDMKTIEPMERLESVKGHLVYFPL 1096
Query: 664 EFMCQEDLRPVFNESEFYASPQVFH 688
+FMC+EDLRPVFNESE+YASPQVFH
Sbjct: 1097 DFMCKEDLRPVFNESEYYASPQVFH 1121
>GSVIVT01035853001 assembled CDS
Length = 752
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 36/237 (15%)
Query: 349 EESIHNAYCTLIQKAQHFIYIENQFFISG---------LCGDEIIQNRVVDALYKRILQA 399
+ SI +AY I++A+HFIYIENQ+FI D N + L +I+
Sbjct: 440 DRSIQDAYINAIRRARHFIYIENQYFIGSSFDWAAKDIKVEDINALNLIPKELSLKIVSK 499
Query: 400 YKEQKCFRVIVVIPLLPGFQGGLVDGGAATVRAIMHWQYRTISREKTSILYKL-SEDLGP 458
+ + F V +VIPL P G+ + +A+V+AI+ WQ RT+ T I+ L + +
Sbjct: 500 IEAGERFTVYIVIPLWPE---GIPE--SASVQAILDWQRRTMEMMYTDIVQALQARGIHA 554
Query: 459 KTHDYISFYGLRKYGRLF------KDGPVATS-----------QVYVHSKVMIVDDHLAL 501
DY++F+ L + K+ P S +YVHSK+MIVDD +
Sbjct: 555 NPRDYLTFFCLGNRELINADEYKPKEKPAEGSDYMRAQQSRRFMIYVHSKMMIVDDEYII 614
Query: 502 IGSSNINDRSLLGSRDSEIGVVIEDKEFVDSSMNGEPWKAGKFTHSLRCSLWSEHLG 558
IGS+NIN RS+ G RD+EI + + ++ G H R +LW EHLG
Sbjct: 615 IGSANINQRSMDGGRDTEIAMGGYQPHHLAATEEG----GRGAIHGFRLALWYEHLG 667
>GSVIVT01023350001 assembled CDS
Length = 842
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 110/238 (46%), Gaps = 38/238 (15%)
Query: 349 EESIHNAYCTLIQKAQHFIYIENQFFISGLC------GDEIIQNRVVDALYKRILQAYKE 402
+ SIH AY I+ AQHFIYIENQ+F+ N + L +I
Sbjct: 532 DRSIHAAYVKAIRSAQHFIYIENQYFLGSAYHWPSYKNAAGADNLIPMELALKISSKISA 591
Query: 403 QKCFRVIVVIPLLPGFQGGLVDG--GAATVRAIMHWQYRTISREKTSILYKLSEDLGPKT 460
+ FRV +V+P+ P +G +A+V+ I+ WQ +T+S I + + T
Sbjct: 592 NEHFRVYIVVPMWP-------EGVPTSASVQEILFWQGQTMSMMYQIIGQAIHKAGLSDT 644
Query: 461 H---DYISFYGLRKYGRLFKDGPVATSQ-----------------VYVHSKVMIVDDHLA 500
H DY++FY L K + TS +YVH+K MIVDD
Sbjct: 645 HHPQDYLNFYCLGKREASSTESSAQTSNSSENRALGLAQKFRRFMIYVHAKGMIVDDEYV 704
Query: 501 LIGSSNINDRSLLGSRDSEIGVVIEDKEFVDSSMNGEPWKAGKFTHSLRCSLWSEHLG 558
LIGS+NIN RSL GSRD+EI + + S P + R SLW+EHLG
Sbjct: 705 LIGSANINQRSLDGSRDTEIAMGAYQPSYTWSGKKTHPHGQ---VYGYRMSLWAEHLG 759
>GSVIVT01008734001 assembled CDS
Length = 823
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 116/235 (49%), Gaps = 34/235 (14%)
Query: 349 EESIHNAYCTLIQKAQHFIYIENQFFISGLCGDEIIQNRVVDALYK-----RILQAYKEQ 403
++SI AY I+ AQHFIYIENQ+FI +N D L +I + +
Sbjct: 517 DKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKNAGADNLIPMELALKIASKIRAK 576
Query: 404 KCFRVIVVIPLLPGFQGGLVDGGAATVRAIMHWQYRTISREKTSILYKLS----EDLGPK 459
+ F V VVIP+ P +G + A+V+ I+ WQ +T+ I +L ED P+
Sbjct: 577 ERFSVYVVIPMWP--EG---NPSCASVQEILFWQGQTMQMMYDIIAQELQSMQLEDAHPQ 631
Query: 460 THDYISFYGLRKYGRLFKDGPVATSQ---------------VYVHSKVMIVDDHLALIGS 504
DY++FY L K+ + +Q +YVH+K MIVDD ++GS
Sbjct: 632 --DYLNFYCLGNREEPPKEVSSSNTQASDGVSTSKKFHRFMIYVHAKGMIVDDEYVILGS 689
Query: 505 SNINDRSLLGSRDSEIGVVIEDKEFVDSSMNGEPWKAGKFTHSLRCSLWSEHLGL 559
+NIN RS+ GSRD+EI + + P G+ + R SLW+EHLG+
Sbjct: 690 ANINQRSMAGSRDTEIAMGAYQPRHTWAKKKKHP--HGQI-YGYRMSLWAEHLGM 741
>GSVIVT01027587001 assembled CDS
Length = 940
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 118/243 (48%), Gaps = 52/243 (21%)
Query: 351 SIHNAYCTLIQKAQHFIYIENQFFIS---------GLCGDEIIQNRVVDALYKRILQAYK 401
SIH AY I+ AQHFIYIENQ+FI L D II + + +I +
Sbjct: 632 SIHTAYVKAIRAAQHFIYIENQYFIGSSFNWTSYKNLGADNIIPMEIALKIANKI----R 687
Query: 402 EQKCFRVIVVIPLLPGFQGGLVDGGAATVRAIMHWQYRTISREKTSILYK------LSED 455
+ F +V+P+ P +G V GAAT R I+ WQ++T+ +I YK L E
Sbjct: 688 ANERFAAYIVVPMWP--EG--VPTGAATQR-ILFWQHKTMQMMYETI-YKALVEVGLEEA 741
Query: 456 LGPKTHDYISFYGLRKYGRLFKDG---PVATS-----------------QVYVHSKVMIV 495
P+ DY++F+ L R DG P TS +YVHSK MIV
Sbjct: 742 FTPQ--DYLNFFCLGN--REAVDGSETPGTTSPTAANTPQAHSRKNRRFMIYVHSKGMIV 797
Query: 496 DDHLALIGSSNINDRSLLGSRDSEIGVVIEDKEFVDSSMNGEPWKAGKFTHSLRCSLWSE 555
DD ++GS+NIN RS+ G+RD+EI + + + P G+ + R SLW+E
Sbjct: 798 DDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARKLSNP--RGQI-YGYRMSLWAE 854
Query: 556 HLG 558
H G
Sbjct: 855 HTG 857
>GSVIVT01016876001 assembled CDS
Length = 950
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 123/261 (47%), Gaps = 52/261 (19%)
Query: 333 QVIRSVSQWSAG----VGQPEESIHNAYCTLIQKAQHFIYIENQFFISGLCGDEIIQ--- 385
QV RS+ SA E+SIH AY I++A+ FIYIENQ+FI G E Q
Sbjct: 624 QVYRSIDHVSASHLPRNFAVEQSIHEAYVEAIRRAERFIYIENQYFIGGCHLWEKDQHAG 683
Query: 386 --NRVVDALYKRILQAYKEQKCFRVIVVIPLLPGFQGGLVDGGAATV--RAIMHWQYRTI 441
N + + ++ + ++ F V ++IP+ P +G + + I+HW
Sbjct: 684 CRNLIPIEIALKVASKIRAKERFAVYILIPMWP-------EGAPESEPGQDILHW----- 731
Query: 442 SREKTSILYKLS----EDLGPKTH--DYISFY--------GLRKYGRLFKDGPVATS--- 484
+RE +++Y+L ++ G H DY++F+ G +Y P
Sbjct: 732 TRETMAMMYRLIGEAIDENGGSGHPRDYLNFFCLANREEKGKGEYASPHPPHPATQYWNA 791
Query: 485 ------QVYVHSKVMIVDDHLALIGSSNINDRSLLGSRDSEIGVVIEDKEFVDSSMNGEP 538
VYVHSK+MIVDD LIGS+N+N RS+ G RD+EI V S NGE
Sbjct: 792 QKHRRFMVYVHSKLMIVDDTYILIGSANVNQRSMDGQRDTEIAVGCY------QSKNGEN 845
Query: 539 WKAGKFTHSLRCSLWSEHLGL 559
H+ R SLW EH GL
Sbjct: 846 EMCRGDIHAYRMSLWYEHTGL 866
>GSVIVT01019879001 assembled CDS
Length = 839
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 54/273 (19%)
Query: 331 HCQVIRSVSQWSAGVGQPEE-------------------SIHNAYCTLIQKAQHFIYIEN 371
H QV RS+ S G P+E SIH AY I+ AQHFIYIEN
Sbjct: 495 HVQVFRSIDSTSVE-GFPKEPKEATSKNLVCGKNILIDMSIHTAYVKAIRAAQHFIYIEN 553
Query: 372 QFFISGLCG-----DEIIQNRVVDALYKRILQAYKEQKCFRVIVVIPLLPGFQGGLVDGG 426
Q+F+ D N + + +I + ++ F +VIP+ P +G V
Sbjct: 554 QYFLGSSYNWASYKDLGANNLIPMEIALKIANKIRAKERFSAYIVIPMWP--EG--VPTS 609
Query: 427 AATVRAIMHWQYRTISREKTSILYKLSEDLGPKTH----DYISFY--GLRKYG------- 473
T R I+ WQ++T+ + ++YK +++G + DY++F+ G R+ G
Sbjct: 610 TPTQR-ILFWQHKTM-QMMYEMVYKALQEVGLENQYHPQDYLNFFCLGNREEGVDTSNAG 667
Query: 474 -RLFKDGPVATSQ------VYVHSKVMIVDDHLALIGSSNINDRSLLGSRDSEIGVVIED 526
+ + P A ++ +YVHSK MIVDD +IGS+NIN RS+ G+RD+EI +
Sbjct: 668 NQSAANTPQALARKSRRFMIYVHSKGMIVDDEYLIIGSANINQRSMEGTRDTEIAMGAYQ 727
Query: 527 KEFVDSSMNGEPWKAGKFTHSLRCSLWSEHLGL 559
+ P G+ + R SLW+EH G+
Sbjct: 728 PHHTWARKQSSP--HGQI-YGYRMSLWAEHTGV 757
>GSVIVT01015542001 assembled CDS
Length = 703
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 55/220 (25%)
Query: 349 EESIHNAYCTLIQKAQHFIYIENQFFISGLCGDEIIQNRVVD---------ALYKRILQA 399
+ SI +AY I++A++FIYIENQ+F+ G + +V D L +I+
Sbjct: 446 DRSIQDAYINAIRRAKNFIYIENQYFLGSSFGWNLDGLKVEDIGALHLIPKELSLKIVSK 505
Query: 400 YKEQKCFRVIVVIPLLPGFQGGLVDGGAATVRAIMHWQYRTISREKTSILYKLSEDLGPK 459
+ + F V VVIP+ P G+ + A +
Sbjct: 506 IEAGERFSVYVVIPMWPE---GVPESSCA------------------------------Q 532
Query: 460 THDYISFYGLRKYGRLFKDGPVATSQVYVHSKVMIVDDHLALIGSSNINDRSLLGSRDSE 519
+ D+ + Y + R F +YVH+K+MIVDD + GS+NIN RS+ G+RDSE
Sbjct: 533 SPDHDTNYHRAQQSRRF--------MIYVHAKMMIVDDEYIITGSANINQRSMDGARDSE 584
Query: 520 IGVVIEDKEFVDSSMNGEPWKAGKFTHSLRCSLWSEHLGL 559
I + + S A H R +LW EHLGL
Sbjct: 585 IAMGAYQPYHLASKQ-----PARGHIHGFRMALWYEHLGL 619
>GSVIVT01015543001 assembled CDS
Length = 604
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 68/227 (29%)
Query: 349 EESIHNAYCTLIQKAQHFIYIENQFFIS--------GLCGDEIIQNRVV-DALYKRILQA 399
+ SI +AY I+KA++FIYIENQ+F+ GL ++I + ++ L +++
Sbjct: 346 DRSIQDAYIHAIRKAKNFIYIENQYFLGSSFCWNSDGLKVEDIGASHLIPKELSLKVVSK 405
Query: 400 YKEQKCFRVIVVIPLLPGFQGGLVDGGAATVRAIMHWQYRTISREKTSILYKLSEDLGPK 459
+ + F + VV+P+ P E Y+ P+
Sbjct: 406 IETGERFSIYVVVPMWP---------------------------EGIPEKYE-----PPE 433
Query: 460 THDYISFYGLRKYGRLFKDGPVATSQVYVHSKVMIVDDHLALIGSSNINDRSLLGSRDSE 519
+ D+ + Y + R F +YVH+K+MIVDD +IGS+NIN RS+ G+RDSE
Sbjct: 434 SPDHDTDYYRAQQSRRF--------MIYVHAKMMIVDDEYIVIGSANINQRSMDGARDSE 485
Query: 520 IGVVIEDKEFVDSSMNG-EPWK------AGKFTHSLRCSLWSEHLGL 559
I +M G +P+ A H R +LW EHLGL
Sbjct: 486 I------------AMGGYQPYHLATKQPARGQIHGFRMALWYEHLGL 520
>GSVIVT01005195001 assembled CDS
Length = 1607
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 42/207 (20%)
Query: 386 NRVVDALYKRILQAYKEQKCFRVIVVIPLLPGFQGGLVDGGAATVRAIMHWQ-------Y 438
N + L +I + ++ F V +VIP+ P +G D + TV+ I+ WQ Y
Sbjct: 1339 NLIPMELALKIASKIRAKERFAVYIVIPMWP--EG---DPKSNTVQEILFWQAQTMQMMY 1393
Query: 439 RTISREKTSILYKLSEDLGPKTHDYISFYGLRKYGRLFK-------------DGPVATSQ 485
I++E S+ + S L DY++FY L + K D +A+++
Sbjct: 1394 EVIAKELKSMQLEDSHPL-----DYLNFYCLGNREGVTKEMSEKASPTPANADAVLASAK 1448
Query: 486 -----VYVHSKVMIVDDHLALIGSSNINDRSLLGSRDSEIGVVIEDKEFVDSSMNGEPWK 540
+YVH+K MIVDD ++GS+NIN RS+ G++D+EI + + + P
Sbjct: 1449 FRRFMIYVHAKGMIVDDEYLIMGSANINQRSMAGTKDTEIAMGAYQRHHTWAEKKKHPHG 1508
Query: 541 AGKFTHSLRCSLWSEHLGLNAGEINKI 567
+ R SLW+EHLG+ +NK+
Sbjct: 1509 Q---VYGYRMSLWAEHLGM----VNKL 1528
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 349 EESIHNAYCTLIQKAQHFIYIENQFFISGLCG-----DEIIQNRVVDALYKRILQAYKEQ 403
++SI AY I+ AQHFIYIENQ+F+ D N + L +I K +
Sbjct: 1220 DKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKDAGADNLIPMELALKIASKIKAK 1279
Query: 404 KCFRVIVVIPLLPGFQGGLVDGGAATVRAIMHWQ 437
+ F V +VIP+ P +G D + TV+ I+ WQ
Sbjct: 1280 ERFAVYIVIPMWP--EG---DPKSNTVQEILFWQ 1308
>GSVIVT01017317001 assembled CDS
Length = 154
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 486 VYVHSKVMIVDDHLALIGSSNINDRSLLGSRDSEIGVVIEDKEFVDSSMNGEPWKAGKFT 545
+YVH+K+MIVDD +IGS+NIN RS+ G+RDSEI + + S +P +
Sbjct: 2 IYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLASR---QPARGQ--I 56
Query: 546 HSLRCSLWSEHLGL 559
H R SLW EHLG+
Sbjct: 57 HGFRMSLWYEHLGM 70