Jatropha Genome Database
- JcCB0013291.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0013291.20 - phase: 0 /pseudo/partial
(157 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01034988001 assembled CDS 158 1e-39
GSVIVT01035409001 assembled CDS 93 6e-20
GSVIVT01008413001 assembled CDS 91 2e-19
GSVIVT01021884001 assembled CDS 91 3e-19
GSVIVT01019821001 assembled CDS 89 1e-18
GSVIVT01033779001 assembled CDS 87 3e-18
GSVIVT01009192001 assembled CDS 79 7e-16
GSVIVT01034710001 assembled CDS 72 1e-13
GSVIVT01029147001 assembled CDS 64 2e-11
GSVIVT01036758001 assembled CDS 61 2e-10
GSVIVT01030194001 assembled CDS 60 3e-10
GSVIVT01029055001 assembled CDS 60 4e-10
GSVIVT01012895001 assembled CDS 60 6e-10
GSVIVT01023958001 assembled CDS 59 1e-09
GSVIVT01001690001 assembled CDS 56 8e-09
GSVIVT01008728001 assembled CDS 55 1e-08
GSVIVT01002332001 assembled CDS 52 9e-08
GSVIVT01006142001 assembled CDS 52 9e-08
GSVIVT01035584001 assembled CDS 52 1e-07
GSVIVT01012116001 assembled CDS 50 4e-07
GSVIVT01007240001 assembled CDS 50 5e-07
GSVIVT01032389001 assembled CDS 46 7e-06
GSVIVT01020712001 assembled CDS 46 8e-06
>GSVIVT01034988001 assembled CDS
Length = 732
Score = 158 bits (399), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 83/91 (91%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WELATEKIPWDNLN+MQVIGAVGFMNQRL+IPK+VD +WAS IESCWHS+P+ RP+FQE
Sbjct: 642 LWELATEKIPWDNLNTMQVIGAVGFMNQRLDIPKEVDLRWASIIESCWHSDPRSRPTFQE 701
Query: 127 LLEKLRDLQRQYAIQFQAARSAAGDNTQKEL 157
LL K +D+ RQ +QFQAAR+AAGDNTQKEL
Sbjct: 702 LLGKFKDILRQQTMQFQAARAAAGDNTQKEL 732
>GSVIVT01035409001 assembled CDS
Length = 876
Score = 92.8 bits (229), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WELAT +IPW +N MQV+GAVGF ++RLEIP++VDP A I CW P+ RPSF +
Sbjct: 792 LWELATLRIPWSGMNPMQVVGAVGFQDRRLEIPEEVDPMVAQIINDCWEVEPRKRPSFSQ 851
Query: 127 LLEKLRDLQRQYAIQFQAARSA 148
L+ +L+ LQ + ++R A
Sbjct: 852 LMSRLKHLQHLVFERASSSRQA 873
>GSVIVT01008413001 assembled CDS
Length = 898
Score = 90.9 bits (224), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WEL+T + PW +N MQV+GAVGF ++RL+IP D+DP A I CWH+NP+ RP+F E
Sbjct: 797 LWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDMDPVVADIIRRCWHTNPKMRPTFAE 856
Query: 127 LLEKLRDLQRQYAIQFQAARSAAGDNTQKE 156
++ L+ LQ+ Q R +A ++ +E
Sbjct: 857 IMATLKPLQKPITSS-QVPRPSAAISSGQE 885
>GSVIVT01021884001 assembled CDS
Length = 876
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WELAT ++PW +N MQV+GAVGF N+RL+IPK+VDP A I CW ++P RPSF +
Sbjct: 781 LWELATLRLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVARIIWECWQTDPNLRPSFAQ 840
Query: 127 LLEKLRDLQR 136
L L+ LQR
Sbjct: 841 LTVALKPLQR 850
>GSVIVT01019821001 assembled CDS
Length = 695
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WEL T+ IPW +LNS+QV+G VGFM++RL++P+ +DP+ +S I+ CW +NP+ RPSF +
Sbjct: 608 LWELMTQSIPWVHLNSLQVVGIVGFMDRRLDLPEGLDPRVSSLIQDCWKTNPEQRPSFVD 667
Query: 127 LLEKLRDLQRQYAIQ-FQAAR 146
L+ + L + +A + Q AR
Sbjct: 668 LIHCVTSLIQTFATESVQEAR 688
>GSVIVT01033779001 assembled CDS
Length = 745
Score = 87.0 bits (214), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WELAT + PW NLN QV+ AVGF +RLEIP+D++PQ AS IE+CW + P RPSF
Sbjct: 661 LWELATLQQPWSNLNPAQVVAAVGFKGKRLEIPRDLNPQVASIIEACWANEPWKRPSFFN 720
Query: 127 LLEKLRDL 134
++E L+ L
Sbjct: 721 IMESLKPL 728
>GSVIVT01009192001 assembled CDS
Length = 905
Score = 79.3 bits (194), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WEL T + PW+ L+ QV+GAV F N+RL IP++ P AS +ESCW +P RPSF
Sbjct: 825 LWELVTMQQPWNGLSPAQVVGAVAFQNRRLSIPQNTSPVLASLMESCWADDPAQRPSFSS 884
Query: 127 LLEKLRDL 134
++E L+ L
Sbjct: 885 IVETLKKL 892
>GSVIVT01034710001 assembled CDS
Length = 758
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WEL T + PW +LN QV+ AV F +RLEIP +V+ Q A IE+CW + P RP F
Sbjct: 671 LWELVTLQRPWKHLNPAQVVAAVAFKGKRLEIPAEVNHQVAYLIEACWANEPSKRPPFSF 730
Query: 127 LLEKLRDLQRQYAIQFQAARS 147
+ E L+ L FQ + S
Sbjct: 731 IKEYLQPLISSSPQPFQGSHS 751
>GSVIVT01029147001 assembled CDS
Length = 978
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
MWEL T P+ +++ +IG + R +IP+ +P+W +ESCW S+P RPSF E
Sbjct: 904 MWELLTGDEPYADMHCASIIGGIVNNTLRPQIPRWCEPEWKYLMESCWASDPAERPSFSE 963
Query: 127 LLEKLRDL 134
+ +KLR++
Sbjct: 964 ISQKLRNM 971
>GSVIVT01036758001 assembled CDS
Length = 1045
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WE+ T + P+ N++ +IG + R +P DP+W + +E CW NP RPSF E
Sbjct: 963 LWEILTGEEPYANMHYGAIIGGIVSNTLRPTVPSSCDPEWRTLMEQCWAPNPAVRPSFTE 1022
Query: 127 LLEKLR 132
+ +LR
Sbjct: 1023 ITGRLR 1028
>GSVIVT01030194001 assembled CDS
Length = 337
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 68 WELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQEL 127
WEL T ++P++ ++++Q A F +R +P+D+ P A I+SCW +P RPSF ++
Sbjct: 216 WELLTNRMPFEGMSNLQAAYAAAFKQERPSLPEDISPDLAFIIQSCWVEDPNMRPSFSQI 275
Query: 128 LEKL 131
+ L
Sbjct: 276 IRML 279
>GSVIVT01029055001 assembled CDS
Length = 952
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
MWE+ T + P+ N++ +IG + R IP+ DP W +E CW +P RPSF E
Sbjct: 871 MWEILTGEEPYANMHCGAIIGGIVSNTLRPPIPERCDPDWRKLMEECWSPDPAARPSFTE 930
Query: 127 LLEKLR 132
+ +LR
Sbjct: 931 ITNRLR 936
>GSVIVT01012895001 assembled CDS
Length = 489
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
MWEL T + P+ +L+ +IG + R +P+ DP+W + +E CW S P RPSF E
Sbjct: 405 MWELLTGEEPYADLHYGAIIGGIVSNTLRPSVPEFCDPEWRALMERCWSSEPSERPSFTE 464
Query: 127 LLEKLRDLQRQYAIQFQAAR 146
+ +LR + + + Q ++
Sbjct: 465 IANQLRSMAAKIPPKGQISQ 484
>GSVIVT01023958001 assembled CDS
Length = 580
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKDVDPQWASTIESCWHSNPQCRPSF 124
+WEL T K+P++ L +Q AVG + + R +PK+ P+ A +E CW +P RP F
Sbjct: 485 LWELLTGKLPYEYLTPLQ--AAVGVVQKGLRPTMPKNTHPKLAELLERCWQQDPTLRPDF 542
Query: 125 QELLEKLRDLQRQ 137
E++E L+ + ++
Sbjct: 543 SEIIEILQQIAKE 555
>GSVIVT01001690001 assembled CDS
Length = 550
Score = 55.8 bits (133), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGF-MNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQ 125
+WEL T KIP+DN+ +Q A+G R ++P++ P+ ++ CW + P RPSF
Sbjct: 470 LWELTTAKIPYDNMTPLQ--AALGVRQGLRPDLPENTHPKLVDMMQRCWEAVPGNRPSFS 527
Query: 126 ELLEKLRDLQRQ 137
E+ +L +L ++
Sbjct: 528 EITVELEELLQE 539
>GSVIVT01008728001 assembled CDS
Length = 522
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQ--RLEIPKDVDPQWASTIESCWHSNPQCRPSF 124
+WEL T K+P+++L +Q AVG + + R IP P I+ CWH P RP F
Sbjct: 431 LWELLTGKLPYEHLTPLQ--AAVGVVQKGLRPTIPSHTYPSLVKLIKRCWHQEPSLRPEF 488
Query: 125 QELLEKLRDL 134
E++E L+ +
Sbjct: 489 TEIMEILQQI 498
>GSVIVT01002332001 assembled CDS
Length = 231
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLE--IPKDVDPQWASTIESCWHSNPQCRPSF 124
+WEL T ++P+ L +Q AVG + + L +PK P+ A +E CW +P RP F
Sbjct: 135 LWELLTGELPYSFLTPLQ--AAVGVVQKGLRPTVPKHTHPKIAGLLERCWWQDPTLRPDF 192
Query: 125 QELLEKLRDL 134
+LE L L
Sbjct: 193 STILEILHQL 202
>GSVIVT01006142001 assembled CDS
Length = 127
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLE--IPKDVDPQWASTIESCWHSNPQCRPSF 124
+WEL T ++P+ L +Q AVG + + L +PK P+ A +E CW +P RP F
Sbjct: 31 LWELLTGELPYSFLTPLQ--AAVGVVQKGLRPTVPKHTHPKIAGLLERCWWQDPTLRPDF 88
Query: 125 QELLEKLRDL 134
+LE L L
Sbjct: 89 STILEILHQL 98
>GSVIVT01035584001 assembled CDS
Length = 125
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WEL T +P+ N+ ++Q AV R IP D P + + CW +NP+ RP F E
Sbjct: 34 LWELITGLLPFQNMTAVQAAFAVVNKGVRPIIPSDCLPVLSDIMTRCWDANPEVRPPFTE 93
Query: 127 LLEKLRDLQRQYAIQFQAAR 146
++ L + + + + AR
Sbjct: 94 VVRMLENAEIEIMTTVRKAR 113
>GSVIVT01012116001 assembled CDS
Length = 1238
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WE+ T + P+ +++ +IG + R +P D +W +E CW +P RPSF E
Sbjct: 1149 LWEILTGEEPYAHMHYGAIIGGIVNNTLRPPVPSYCDSEWKLLMEQCWAPDPIGRPSFTE 1208
Query: 127 LLEKLRDL 134
+ +LR +
Sbjct: 1209 IARRLRAM 1216
>GSVIVT01007240001 assembled CDS
Length = 118
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WEL T +P+ + +Q AV N R +P P A I+ CW +NP RP F
Sbjct: 11 LWELTTALLPFQGMTPVQAAFAVSEKNARPPLPASCQPALAHLIKRCWAANPSKRPDFSS 70
Query: 127 LLEKL 131
++ L
Sbjct: 71 IVSAL 75
>GSVIVT01032389001 assembled CDS
Length = 352
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
+WEL K+P++ ++++Q A F N R +D+ A + SCW +P RP+F +
Sbjct: 223 LWELVHNKLPFEGMSNLQAAYAAAFKNMRPSA-EDLPEDLALIVTSCWKEDPNTRPNFSQ 281
Query: 127 LLEKL 131
+++ L
Sbjct: 282 IIQML 286
>GSVIVT01020712001 assembled CDS
Length = 817
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 67 MWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPQWASTIESCWHSNPQCRPSFQE 126
MWEL T PW+ + +V+ AV RL+IP+ I CW + P RPS ++
Sbjct: 749 MWELCTLNRPWEGVPPERVVYAVAHEGSRLDIPEG---PLGMLIADCW-AEPHQRPSCED 804
Query: 127 LLEKLRDLQ 135
+L +L+D +
Sbjct: 805 ILSRLQDCE 813