Jatropha Genome Database

JcCB0008631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0008631.10 - phase: 0 
         (446 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01011171001 assembled CDS                                       684   0.0  
GSVIVT01032803001 assembled CDS                                       660   0.0  
GSVIVT01024726001 assembled CDS                                       565   e-161
GSVIVT01024725001 assembled CDS                                       514   e-146
GSVIVT01025364001 assembled CDS                                       183   2e-46
GSVIVT01003874001 assembled CDS                                       118   7e-27
GSVIVT01033502001 assembled CDS                                        97   2e-20

>GSVIVT01011171001 assembled CDS
          Length = 439

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/451 (75%), Positives = 376/451 (83%), Gaps = 18/451 (3%)

Query: 1   MASWVLSECGLKPLPQFFARPRTGAVL--RTNSSKPRFLQTSKTVTDL--RQPFSFG-ER 55
           MASWVLSECG++PLPQ + RPRTG +   + N S+ RF  ++++ TDL  R+P     ER
Sbjct: 1   MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDLKFREPIGCSKER 60

Query: 56  SWRVKVSAPYRVXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLSDIRAAIPKHCWVK 115
           +W +KVSAP RV                       FDPGAPPPFKL+DIRAAIPKHCWVK
Sbjct: 61  NWALKVSAPLRVEVNGVEEQPE-------------FDPGAPPPFKLADIRAAIPKHCWVK 107

Query: 116 DPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSN 175
           DPW+SMSYVVRD                    PLYWAAQGTMFWALFVLGHDCGHGSFSN
Sbjct: 108 DPWRSMSYVVRDVVVVCGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSN 167

Query: 176 NPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFRNLDNITRK 235
           NP LNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPE+I++NLD +TR 
Sbjct: 168 NPTLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERIYKNLDVVTRM 227

Query: 236 LRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGL 295
           LRFTVPFPMLAYPFYLW+RSPGKTGSHF P SDLF+P+ERK+VITSTICWTAMAALLVGL
Sbjct: 228 LRFTVPFPMLAYPFYLWSRSPGKTGSHFDPSSDLFVPSERKNVITSTICWTAMAALLVGL 287

Query: 296 SFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRD 355
           SFVMGPIQ+LKLYG+PYW FVMWLDFVTYLHHHGH++KLPWYRG EWSYLRGGLTTLDRD
Sbjct: 288 SFVMGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHDDKLPWYRGKEWSYLRGGLTTLDRD 347

Query: 356 YGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPEKSGPLPFHLIGSL 415
           YGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREP+ SGPLPFHLIGSL
Sbjct: 348 YGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKGSGPLPFHLIGSL 407

Query: 416 VRSLRKDHYVSDTGDVVYYQTDRQLSGSTSE 446
           VRSL+KDHYV+DT ++VYYQ+D QLSGS++ 
Sbjct: 408 VRSLKKDHYVNDTDEIVYYQSDPQLSGSSNS 438


>GSVIVT01032803001 assembled CDS
          Length = 449

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/446 (73%), Positives = 358/446 (80%), Gaps = 4/446 (0%)

Query: 1   MASWVLSECGLKPLPQFFARPRTG-AVLRTNSSKPRFLQTSKTVTDLRQPFSFGERS--W 57
           MASWV+SECGL+PLP+ + RPRTG +   T+  K R L   K         S G RS  W
Sbjct: 1   MASWVVSECGLRPLPRIYPRPRTGISSTETSQLKCRALPLCKNGKAPSLWVSGGSRSREW 60

Query: 58  RVKVSAPYRVXXXXXXXXXXXXXXXXXXXXXXXFDPGAPPPFKLSDIRAAIPKHCWVKDP 117
            +KVSAP  V                       FDPGAPPPF+L++IRAAIPKHCW+KDP
Sbjct: 61  GLKVSAPLMVGSVDEEFREGEAINGVSDGDGG-FDPGAPPPFRLAEIRAAIPKHCWMKDP 119

Query: 118 WKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNNP 177
           W+SMSYVVRD                    PLYW AQGTMFWALFVLGHDCGHGSFS+NP
Sbjct: 120 WRSMSYVVRDVAVVFGLAAAAAYFNHWAVWPLYWFAQGTMFWALFVLGHDCGHGSFSSNP 179

Query: 178 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFRNLDNITRKLR 237
           KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPL EKI+R+LD  TR LR
Sbjct: 180 KLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRSLDTATRTLR 239

Query: 238 FTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGLSF 297
           FT+PFPMLAYP YLW RSPGKTGSHF P+SDLF+PNERKDVITST+CW+AMAALLV LSF
Sbjct: 240 FTLPFPMLAYPLYLWGRSPGKTGSHFDPNSDLFIPNERKDVITSTVCWSAMAALLVCLSF 299

Query: 298 VMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRDYG 357
           VMGP+Q+LKLYGIPYW FVMWLD VTYLHHHGHEEKLPWYRG EWSYLRGGLTTLDRDYG
Sbjct: 300 VMGPVQMLKLYGIPYWIFVMWLDLVTYLHHHGHEEKLPWYRGKEWSYLRGGLTTLDRDYG 359

Query: 358 WINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPEKSGPLPFHLIGSLVR 417
            INNIHHDIGTHVIHHLFPQIPHYHL+EAT+AAKPVLGKYYREP+KSGPLPFHL+GSL+R
Sbjct: 360 VINNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPKKSGPLPFHLLGSLIR 419

Query: 418 SLRKDHYVSDTGDVVYYQTDRQLSGS 443
           S+++DHYVSDTGDVVYYQ D QL GS
Sbjct: 420 SMKQDHYVSDTGDVVYYQKDPQLPGS 445


>GSVIVT01024726001 assembled CDS
          Length = 446

 Score =  565 bits (1457), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 260/354 (73%), Positives = 301/354 (85%)

Query: 91  FDPGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPLY 150
           FDP APPPF+L+++RA IPKHCWVKDPWKSMSYV RD                    PLY
Sbjct: 88  FDPSAPPPFRLAEVRAVIPKHCWVKDPWKSMSYVFRDFIVIFGLAIAAIYLDRWVVWPLY 147

Query: 151 WAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHG 210
           WAAQGTMFWALFVLGHDCGHGSFS+NP LNS+VGHLLHS+ILVPY+GWRISHRTHHQN G
Sbjct: 148 WAAQGTMFWALFVLGHDCGHGSFSDNPMLNSMVGHLLHSTILVPYNGWRISHRTHHQNQG 207

Query: 211 HVENDESWHPLPEKIFRNLDNITRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHPDSDLF 270
           HVENDESW P PEK++R+LD  TR LRFT+PFPM AYP YLW RSPGK GSHF+P SD+F
Sbjct: 208 HVENDESWVPFPEKLYRSLDAKTRTLRFTLPFPMFAYPLYLWYRSPGKEGSHFNPYSDMF 267

Query: 271 LPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFVMWLDFVTYLHHHGH 330
             +ERK V+TST+CW+ M ALL+ LSFV GP+Q+LKLYG+PYW F+MWLDFVTYL HHG+
Sbjct: 268 PISERKAVLTSTVCWSIMVALLLVLSFVAGPVQVLKLYGVPYWVFIMWLDFVTYLQHHGY 327

Query: 331 EEKLPWYRGNEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAA 390
           E+KLPWYRG EWSYLRGGLTT+DRDYGW N+I H+ GTHVIHHLFPQIPHYHLIEATEAA
Sbjct: 328 EQKLPWYRGKEWSYLRGGLTTVDRDYGWFNSIQHNTGTHVIHHLFPQIPHYHLIEATEAA 387

Query: 391 KPVLGKYYREPEKSGPLPFHLIGSLVRSLRKDHYVSDTGDVVYYQTDRQLSGST 444
           KPVLGKYYREP+KSGP+P HL+ +L++S+++DHYVSDTGD++YYQTD +L  S+
Sbjct: 388 KPVLGKYYREPKKSGPIPAHLVKTLIKSMKEDHYVSDTGDILYYQTDPELYPSS 441


>GSVIVT01024725001 assembled CDS
          Length = 329

 Score =  514 bits (1323), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 245/320 (76%), Positives = 274/320 (85%)

Query: 121 MSYVVRDXXXXXXXXXXXXXXXXXXXXPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLN 180
           MSYV+RD                    PLYWAAQGTMFWALFVLGHDCGHGSFS+NPKLN
Sbjct: 1   MSYVLRDVVVVFGLAVAAIYSDSWLVWPLYWAAQGTMFWALFVLGHDCGHGSFSDNPKLN 60

Query: 181 SVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFRNLDNITRKLRFTV 240
           S+VGHLLHS ILVPYHGWRISHRTHHQNHGHVENDESW PLPEK+++NLDN TR  RFTV
Sbjct: 61  SIVGHLLHSWILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKMYKNLDNSTRIFRFTV 120

Query: 241 PFPMLAYPFYLWNRSPGKTGSHFHPDSDLFLPNERKDVITSTICWTAMAALLVGLSFVMG 300
           PFP+ AYP YLW+RSPGK GSHF+P+SDLF  +ERK V+TST+CW  M ALLV +SFV+G
Sbjct: 121 PFPIFAYPMYLWHRSPGKKGSHFNPNSDLFPTSERKAVLTSTLCWCMMVALLVCVSFVVG 180

Query: 301 PIQLLKLYGIPYWGFVMWLDFVTYLHHHGHEEKLPWYRGNEWSYLRGGLTTLDRDYGWIN 360
             Q+LKLYG+PY  FVMWLDFVTYLHHHG+E+KLPWYRG EWSYLRGGLTT+DRDYGW N
Sbjct: 181 LPQVLKLYGVPYLVFVMWLDFVTYLHHHGYEQKLPWYRGKEWSYLRGGLTTVDRDYGWFN 240

Query: 361 NIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPEKSGPLPFHLIGSLVRSLR 420
           NIHHDIGTHVIHHLFPQIPHYHLIEAT+AA+PVLGKYYREP+KSGP+P HL+ +L RS++
Sbjct: 241 NIHHDIGTHVIHHLFPQIPHYHLIEATKAARPVLGKYYREPKKSGPIPIHLLKNLTRSIK 300

Query: 421 KDHYVSDTGDVVYYQTDRQL 440
           +DHYVSDTGDVVYYQTD  L
Sbjct: 301 QDHYVSDTGDVVYYQTDPHL 320


>GSVIVT01025364001 assembled CDS
          Length = 412

 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/325 (35%), Positives = 159/325 (48%), Gaps = 28/325 (8%)

Query: 93  PGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXX----- 147
           P   PPF L  I+ AIP HC+ +   +S SYV  D                         
Sbjct: 62  PHTKPPFTLGQIKKAIPPHCFQRSIPRSFSYVAYDLSLAFLFYYIATSYFSLLPSWLTYL 121

Query: 148 --PLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTH 205
             PLYW  QG     ++V+ H+CGH +FS+   L+  VG +LHSS+LVPY  W+ISHR H
Sbjct: 122 AWPLYWTLQGCTLTGVWVIAHECGHHAFSDYQWLDDTVGLILHSSLLVPYFSWKISHRRH 181

Query: 206 HQNHGHVENDESWHPLPEKIFRNLDNITRKLRFTVPFPMLAYPFYLWNRSPGKTGSHFHP 265
           H N G                 +L+ +T  +  T+ +P L   F +  R   +   H+ P
Sbjct: 182 HSNTG-----------------SLEPLTLVITLTLGWP-LYLAFNVSGRPYNRFACHYDP 223

Query: 266 DSDLFLPNERKDVITSTICWTAMAALLVGLSFVMGPIQLLKLYGIPYWGFVMWLDFVTYL 325
              ++   ER  +  S       + +L  L    G   ++ +YGIP      +L  +TYL
Sbjct: 224 YGPIYSDRERLQIYISDAGIFTASYVLYRLILAKGLAWVVCMYGIPLLIVNAFLVLITYL 283

Query: 326 HHHGHEEKLPWYRGNEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLI 384
            H      LP Y   EW +LRG L T+DRDYG +N + H+I  THV HHLF  +PHYH +
Sbjct: 284 QH--THPTLPHYDSLEWDWLRGALATVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAM 341

Query: 385 EATEAAKPVLGKYYREPEKSGPLPF 409
           EAT A KP+LG+YY+   K  P+ +
Sbjct: 342 EATRAIKPILGEYYQFDGKLCPITY 366


>GSVIVT01003874001 assembled CDS
          Length = 441

 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 127/263 (48%), Gaps = 27/263 (10%)

Query: 148 PLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQ 207
           PL WA  GT     FV+GHDC H SFS N  L  +VG L    ++ PY  WR  H  HH 
Sbjct: 147 PLAWAWTGTAVTGFFVIGHDCAHKSFSRNKLLEDIVGTLAFLPLIYPYEPWRFKHDRHHA 206

Query: 208 NHGHVENDESWHPLPEKIFRNLDNITRKLRF----TVPFPMLAYPFYLWNRSPGKTGSHF 263
               +  D +WHP+ ++ F +   + + + +      P+  +A+ + +W           
Sbjct: 207 KTNMLSEDTAWHPVLKEEFDSSPTLRKAIIYGYGPIRPWMSIAH-WLIW----------- 254

Query: 264 HPDSDLFLPNERKDVITSTICWTAMAA----LLVGLSFVMGPIQLLKLYGIPYWGFVMWL 319
           H D + + PNE K V  S  C  A  A    L++  + VMG I   K + +P+ G+  W+
Sbjct: 255 HFDLNKYRPNEIKRVKISLACVFAFMAIGWPLIIYKTGVMGWI---KFWLMPWLGYHFWM 311

Query: 320 DFVTYLHHHGHEEKLPWYRGNEWSYLRGGLT-TLDRDY-GWINNIHHDIGTHVIHHLFPQ 377
              T +HH      +P+   +EW+  +  L  T+  DY  WI  + H I  H+ HH+ P+
Sbjct: 312 STFTMVHHTA--PHIPFKSSDEWNAAQAQLNGTVHCDYPRWIEILCHYINVHIPHHISPR 369

Query: 378 IPHYHLIEATEAAKPVLGKYYRE 400
           IP Y+L  A ++ +   GKY  E
Sbjct: 370 IPSYNLRAAHQSLQENWGKYLNE 392


>GSVIVT01033502001 assembled CDS
          Length = 286

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 71/135 (52%), Gaps = 7/135 (5%)

Query: 93  PGAPPPFKLSDIRAAIPKHCWVKDPWKSMSYVVRDXXXXXXXXXXXXXXXXXXXXPL--- 149
           P + P F LS ++ AIP HC+ +    S SYV+ D                    PL   
Sbjct: 49  PHSKPQFTLSQLKKAIPPHCFQRSVLHSFSYVISDLTWASLLYYIATNYFHLLPHPLSYL 108

Query: 150 ----YWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTH 205
               YWA QG +   ++V+ H+CGH +FS+   L+  VG +LHSS+LVPY  W+ SHR H
Sbjct: 109 AWPIYWAFQGCILTGVWVIAHECGHHAFSDYQWLDDTVGLILHSSLLVPYFSWKYSHRRH 168

Query: 206 HQNHGHVENDESWHP 220
           H N G +E DE + P
Sbjct: 169 HSNTGSLEKDEVFVP 183



 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 53/100 (53%), Gaps = 11/100 (11%)

Query: 342 WSYLRGGLTTLDRDYGWINNI-HHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYRE 400
           W Y R        DYG +N + HH   THV HHLF  +PHYH +EAT+A KPVLG YY  
Sbjct: 191 WRYSRFACHFDPHDYGILNKVFHHITDTHVAHHLFSTLPHYHAMEATKAIKPVLGDYY-- 248

Query: 401 PEKSGPLPFHLIGSLVRSLRKDHYVSDTGD----VVYYQT 436
             +    PF+   ++ R  ++  YV   GD    V +YQ 
Sbjct: 249 --QFDGTPFY--KAMWREAKECVYVQSDGDKSKGVFWYQN 284