Jatropha Genome Database

JcCB0001721.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0001721.20 - phase: 0 
         (811 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01032165001 assembled CDS                                      1343   0.0  
GSVIVT01007826001 assembled CDS                                      1023   0.0  

>GSVIVT01032165001 assembled CDS
          Length = 868

 Score = 1343 bits (3476), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/781 (79%), Positives = 703/781 (90%), Gaps = 1/781 (0%)

Query: 31  RTETIETLLNRLDSKQASASVQESAAKGVLKRLLPSHVHSFKFKIISKDVCGGKSCFLIN 90
            +E IE LL+RL +K+A+ SVQESAAK VL+RLLP+H+ SF+F+I+SKDVCGGKSCF I+
Sbjct: 87  HSEAIEALLSRLATKRAAPSVQESAAKAVLQRLLPTHLDSFQFEIVSKDVCGGKSCFWIS 146

Query: 91  NYKESNQNGPEIIIKGTTGVDLASGLHWYIKYWCGAHLSWDKTGGAQIGSIPKQGSLPLI 150
           NY  S++NGPEI+IKGTT V++ASGLHWYIKYWCGAH+SWDKTG  QI SIPK GSLPL+
Sbjct: 147 NYNVSSKNGPEIMIKGTTAVEIASGLHWYIKYWCGAHVSWDKTGSIQIASIPKPGSLPLV 206

Query: 151 KDGGVMIQRPVPWNYYQNVVTSSYSYVWWDWERWEKEIDWMAFQGINLPLAFTGQEAIWQ 210
           KD GV+IQRPVPWNYYQNVVTSSYSYVWWDWERWEKEIDWMA QG+NLPLAF GQEAIWQ
Sbjct: 207 KDEGVLIQRPVPWNYYQNVVTSSYSYVWWDWERWEKEIDWMALQGVNLPLAFNGQEAIWQ 266

Query: 211 KVFMNFNVSAEDLKDFFGGPAFLAWARMGNLHAWGGPLSQNWLNQQLRLQKQIVSRMLEL 270
           KVFM+FN+S +DL  FFGGPAFLAWARMGNLH WGGPLSQNWL++QL LQKQI+ RMLEL
Sbjct: 267 KVFMDFNISKKDLNGFFGGPAFLAWARMGNLHGWGGPLSQNWLDEQLVLQKQILCRMLEL 326

Query: 271 GMTPVLPSFSGNVPAALKKIFPSANITRLGDWNTVNKNPRWCCTYLLAPSDPLFVEIGEA 330
           GMTPVLPSFSGNVP ALKKIFPSANITRLG+WNTV+ N RWCCTYLL  SDPLF++IG+A
Sbjct: 327 GMTPVLPSFSGNVPEALKKIFPSANITRLGEWNTVDNNTRWCCTYLLDASDPLFIQIGKA 386

Query: 331 FIRQQIKEYGDVTDIYNCDTFNENTPPTNDSAYISSLGAAVYKAMSKGDEDAVWLMQGWL 390
           FIRQQIKEYGDVTDIYNCDTFNEN+PPTND AYISSLGAA+YKAMS+GD+D+VWLMQGWL
Sbjct: 387 FIRQQIKEYGDVTDIYNCDTFNENSPPTNDPAYISSLGAAIYKAMSQGDKDSVWLMQGWL 446

Query: 391 FYSDSSFWKPPQMKALLHSVPFGKMVVLDLFADVKPIWSNSSQFYGTPYVWCMLHNFGGN 450
           FYSDS FWKPPQMKALLHSVPFGKMVVLDLFAD KPIW  SSQFYGTPY+WCMLHNFGGN
Sbjct: 447 FYSDSGFWKPPQMKALLHSVPFGKMVVLDLFADAKPIWRTSSQFYGTPYIWCMLHNFGGN 506

Query: 451 IEMYGILDAISSGPVDARVSENSTMVGVGMCMEGIEHNPVVYELMSEMAFRSEKVQVLEW 510
           IEMYGILDA+SSGPVDAR+S+NSTMVGVGMCMEGIE NPV YELMSEMAFRSEKVQ++EW
Sbjct: 507 IEMYGILDAVSSGPVDARISKNSTMVGVGMCMEGIEQNPVAYELMSEMAFRSEKVQLVEW 566

Query: 511 LKSYSRRRYGKAVHHVEAAWKILHRTIYNCTDGIADHNTDFIVKFPDWDPSANSGSEVSK 570
           LK+YS RRYGKAVHHVEAAW+IL+RTIYNCTDGIADHNTDF+V FPDWDPS N  S++SK
Sbjct: 567 LKTYSYRRYGKAVHHVEAAWEILYRTIYNCTDGIADHNTDFMVNFPDWDPSLNPSSDISK 626

Query: 571 EVE-IHSFLPIPGTRRFLFQEPNSKLPRAHLWYATQEVVNALQLFLDAGNDLLGSLTYRY 629
           E   I   L   G R+ LFQE +S LP++HLWY+T EVVNAL+LFLDAGN+L  S TYRY
Sbjct: 627 EQHIIQKILTQTGRRKILFQETSSDLPQSHLWYSTHEVVNALRLFLDAGNELSKSSTYRY 686

Query: 630 DLVDLTRQVLSKLANQAYIDSIIAFQRKDANALNLHSRKFIQLIKDIDLLLASDDNFLLG 689
           DLVDLTRQVLSKL NQ Y+D++IAF++KDA   +LHS+KF+QL+KDID LLASDDNFLLG
Sbjct: 687 DLVDLTRQVLSKLGNQVYLDAVIAFRQKDAKNFHLHSQKFVQLVKDIDTLLASDDNFLLG 746

Query: 690 TWLKSAKELAVNPSEMRQYEWNARTQVTMWYDTTKTNQSKLHDYANKFWSGLLKDYYLPR 749
           TWL+SAK+LAVNP EM QYEWNARTQ+TMW+  TKTNQSKLHDYANKFWSGLL++YYLPR
Sbjct: 747 TWLESAKKLAVNPREMEQYEWNARTQLTMWFYVTKTNQSKLHDYANKFWSGLLENYYLPR 806

Query: 750 ASIYFDHLLKSLKGNKKFKIEEWRKEWIEFSNKWQADTKLYPMKAKGDALAISKVLYEKY 809
           AS+YF +L K+L  NK FK+EEWR+EWI +SNKWQA  +LYP++AKGD LAIS+ LYEKY
Sbjct: 807 ASMYFSYLAKALTENKNFKLEEWRREWISYSNKWQAGKELYPVRAKGDTLAISRALYEKY 866

Query: 810 F 810
           F
Sbjct: 867 F 867


>GSVIVT01007826001 assembled CDS
          Length = 846

 Score = 1023 bits (2645), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/810 (59%), Positives = 601/810 (74%), Gaps = 36/810 (4%)

Query: 35  IETLLNRLDSKQASASVQESAAKGVLKRLLPSHVHSFKFKIISKDVCGGKSCFLINNYKE 94
           I  LL   D ++A  SVQ +AA GVL RLLPSH  SF+F I+SK+ CGG SCF+I+N+  
Sbjct: 31  ISRLLEIQDRERAPPSVQIAAAYGVLHRLLPSHSSSFEFGIVSKEQCGGDSCFMISNHPS 90

Query: 95  SNQNG-PEIIIKGTTGVDLASGLHWYIKYWCGAHLSWDKTGGAQIGSIPKQGSLPLIKDG 153
           S+ +G PEI+I G TGV++ +GLHWY+KYWCG+H+SWDKTGGAQ+ S+P  GS P +++ 
Sbjct: 91  SSGHGAPEILITGVTGVEIMAGLHWYLKYWCGSHISWDKTGGAQLLSVPDSGSFPRVQEA 150

Query: 154 GVMIQRPVPWNYYQNVVTSSYSYVWWDWERWEKEIDWMAFQGINLPLAFTGQEAIWQKVF 213
           G++IQRP+PWNYYQN VTSSY++ WWDW+RWEKEIDWMA QGINLPLAFTGQEAIWQKVF
Sbjct: 151 GILIQRPIPWNYYQNAVTSSYTFAWWDWKRWEKEIDWMALQGINLPLAFTGQEAIWQKVF 210

Query: 214 MNFNVSAEDLKDFFGGPAFLAWARMGNLHAWGGPLSQNWLNQQLRLQKQIVSRMLELGMT 273
            NFN+S  DLKDFFGGPAFL+W+RMGNLH WGGPL Q+WL+QQL LQK+I++RM ELGMT
Sbjct: 211 RNFNISHLDLKDFFGGPAFLSWSRMGNLHGWGGPLPQSWLDQQLLLQKKILARMYELGMT 270

Query: 274 PVLPSFSGNVPAALKKIFPSANITRLGDWNTVNKNPRWCCTYLLAPSDPLFVEIGEAFIR 333
           PVLP+FSGNVPAALK IFPSA ITRLG+W TV  NPRWCCTYLL  +DPLF+EIG+AFI+
Sbjct: 271 PVLPAFSGNVPAALKYIFPSAKITRLGNWFTVGGNPRWCCTYLLDATDPLFIEIGKAFIQ 330

Query: 334 QQIKEYGDVTDIYNCDTFNENTPPTNDSAYISSLGAAVYKAMSKGDEDAVWLMQGWLFYS 393
           QQ+KEYG    IYNCDTF+ENTPP +D  YISSLGAA+++ M  GD +A+WLMQGWLF  
Sbjct: 331 QQLKEYGRTGHIYNCDTFDENTPPVDDPEYISSLGAAIFRGMQSGDSNAIWLMQGWLFSY 390

Query: 394 DSSFWKPPQMKALLHSVPFGKMVVLDLFADVKPIWSNSSQFYGTPYVW------------ 441
           D  FW+PPQMKALLHSVP G++VVLDLFA+VKPIW  S QFYG PY+W            
Sbjct: 391 D-PFWRPPQMKALLHSVPMGRLVVLDLFAEVKPIWITSEQFYGVPYIWKVTKSGRQQSLK 449

Query: 442 --------------------CMLHNFGGNIEMYGILDAISSGPVDARVS-ENSTMVGVGM 480
                               CMLHNF GNIEMYGILDA++SGP+  R     S +VGVGM
Sbjct: 450 FTNEKCCSFFRSHSPDSEVLCMLHNFAGNIEMYGILDAVASGPILLRAKYAESAVVGVGM 509

Query: 481 CMEGIEHNPVVYELMSEMAFRSEKVQVLEWLKSYSRRRYGKAVHHVEAAWKILHRTIYNC 540
            MEGIE NPVVY+LMSEMAF+  KV V  W+  YS RRYGK+V  ++ AW IL+ T+YNC
Sbjct: 510 SMEGIEQNPVVYDLMSEMAFQHSKVDVKVWIALYSTRRYGKSVPEIQDAWNILYHTVYNC 569

Query: 541 TDGIADHNTDFIVKFPDWDPSANSGSEVSKEVEIHSFLPIPGTRRFLFQEPNSKLPRAHL 600
           TDG  D N D IV FPD DPS     ++S     H +     +RR + +E  +   + HL
Sbjct: 570 TDGSYDKNRDVIVAFPDIDPSFIPTPKLSMPGGYHRYGK-SVSRRTVLKEITNSFEQPHL 628

Query: 601 WYATQEVVNALQLFLDAGNDLLGSLTYRYDLVDLTRQVLSKLANQAYIDSIIAFQRKDAN 660
           WY+T EV +AL LF+ +G  LLGS TYRYDLVDLTRQ L+K ANQ +++ I A+Q  D  
Sbjct: 629 WYSTSEVKDALGLFIASGGQLLGSNTYRYDLVDLTRQALAKYANQLFLEVIEAYQLNDVR 688

Query: 661 ALNLHSRKFIQLIKDIDLLLASDDNFLLGTWLKSAKELAVNPSEMRQYEWNARTQVTMWY 720
               HS+KF++L++D+D LLA  D FLLG WL+SAK+LA +  +  Q+EWNARTQ+TMW+
Sbjct: 689 GAACHSQKFLELVEDMDTLLACHDGFLLGPWLESAKQLAQDEQQEIQFEWNARTQITMWF 748

Query: 721 DTTKTNQSKLHDYANKFWSGLLKDYYLPRASIYFDHLLKSLKGNKKFKIEEWRKEWIEFS 780
           D T+   S L DY NK+WSGLL+DYY PRA+IYF +LL+SL+   +F +++WR+EWI+ +
Sbjct: 749 DNTEDEASLLRDYGNKYWSGLLRDYYGPRAAIYFKYLLESLETGNEFALKDWRREWIKLT 808

Query: 781 NKWQADTKLYPMKAKGDALAISKVLYEKYF 810
           N WQ     YP+++ G+A+  S+ LY KY 
Sbjct: 809 NDWQNSRNAYPVRSSGNAIDTSRRLYNKYL 838