Jatropha Genome Database

JcCA0316871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316871.10 - phase: 0 
         (201 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01015242001 assembled CDS                                       325   1e-89
GSVIVT01001596001 assembled CDS                                       243   5e-65
GSVIVT01004308001 assembled CDS                                       240   3e-64
GSVIVT01011889001 assembled CDS                                       224   3e-59
GSVIVT01005850001 assembled CDS                                       172   9e-44
GSVIVT01011918001 assembled CDS                                       148   2e-36
GSVIVT01031052001 assembled CDS                                       139   1e-33
GSVIVT01030541001 assembled CDS                                       130   5e-31
GSVIVT01015396001 assembled CDS                                       117   3e-27
GSVIVT01017099001 assembled CDS                                       105   1e-23

>GSVIVT01015242001 assembled CDS
          Length = 1179

 Score =  325 bits (832), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 158/194 (81%), Positives = 181/194 (93%)

Query: 1   MLHRSFKPGKCKTALKLAVSRIKLLKNKRDSQVKHLKRELAQLLDSGQDQTARIRVEHVV 60
           MLHRSFKP KCKT+LKLAVSRIKLLKN+R++Q+K +KR+LAQLL SGQDQTARIRVEHVV
Sbjct: 1   MLHRSFKPAKCKTSLKLAVSRIKLLKNRREAQLKQMKRDLAQLLQSGQDQTARIRVEHVV 60

Query: 61  REEKTMAAYDLIEIYCELIVARLPIIESQKNCPIDLKEAISSVIFASPRCADIPELMDVR 120
           REEKTMAAYDLIE+YCE+I ARLPIIESQKNCPIDLKEAI+S+IFASPRC+DIPELM++R
Sbjct: 61  REEKTMAAYDLIEVYCEMIAARLPIIESQKNCPIDLKEAITSIIFASPRCSDIPELMEIR 120

Query: 121 KHFTAKYGKEFVSAAVELRPDCGVSRLLVEKLSAKAPDGPTKIKVLSAIAEEHDVKWDPT 180
           KHFTAKYGK+F+S A+ELRP+CGVSR LVEKLSA APDG TKIK+L+AIAEEH++KW+P 
Sbjct: 121 KHFTAKYGKDFISVALELRPECGVSRNLVEKLSATAPDGQTKIKILAAIAEEHNIKWEPK 180

Query: 181 SFGEKEMKPPEDLL 194
           SF E E KPPE LL
Sbjct: 181 SFEENESKPPEVLL 194


>GSVIVT01001596001 assembled CDS
          Length = 388

 Score =  243 bits (619), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 113/194 (58%), Positives = 150/194 (77%)

Query: 1   MLHRSFKPGKCKTALKLAVSRIKLLKNKRDSQVKHLKRELAQLLDSGQDQTARIRVEHVV 60
             ++ FK  KCKT LKL + RIKLL+N+R+ Q+K ++R++A+LL++GQ+ TARIRVEH++
Sbjct: 7   FFNKGFKGSKCKTLLKLTIPRIKLLRNRREIQIKQMRRDIAKLLETGQEATARIRVEHII 66

Query: 61  REEKTMAAYDLIEIYCELIVARLPIIESQKNCPIDLKEAISSVIFASPRCADIPELMDVR 120
           REE  MAA ++IE+YCELI  RLPIIE+Q+ CP+DLKEAISS+ FA+PRCAD+PEL+ V+
Sbjct: 67  REENMMAAQEIIELYCELISVRLPIIETQRECPLDLKEAISSLCFAAPRCADLPELLQVQ 126

Query: 121 KHFTAKYGKEFVSAAVELRPDCGVSRLLVEKLSAKAPDGPTKIKVLSAIAEEHDVKWDPT 180
               +KYGKEFV+AA EL PDCGV R L+E LS +AP    K+K+L  IAEEH + WDP 
Sbjct: 127 MLMASKYGKEFVAAATELMPDCGVCRQLIELLSVRAPSPDVKLKLLKEIAEEHGLDWDPA 186

Query: 181 SFGEKEMKPPEDLL 194
           +   +  KP EDLL
Sbjct: 187 ASETEFFKPHEDLL 200


>GSVIVT01004308001 assembled CDS
          Length = 360

 Score =  240 bits (612), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 107/194 (55%), Positives = 152/194 (78%)

Query: 1   MLHRSFKPGKCKTALKLAVSRIKLLKNKRDSQVKHLKRELAQLLDSGQDQTARIRVEHVV 60
           +  R F   KCKT  K+A++RIKLL+NKR++ V+ ++R++A LL SGQD TARIRVEHV+
Sbjct: 7   IFRRGFSSSKCKTMAKMAMARIKLLRNKREAVVRQMRRDIALLLQSGQDATARIRVEHVI 66

Query: 61  REEKTMAAYDLIEIYCELIVARLPIIESQKNCPIDLKEAISSVIFASPRCADIPELMDVR 120
           RE+  +AA + +E++CELI+ARL II  Q++CP DLKE ISS+IFA+PRC+DIPEL+ +R
Sbjct: 67  REQNILAANEFLELFCELIIARLTIISKQRDCPADLKEGISSLIFAAPRCSDIPELLAIR 126

Query: 121 KHFTAKYGKEFVSAAVELRPDCGVSRLLVEKLSAKAPDGPTKIKVLSAIAEEHDVKWDPT 180
            +F  KYGK+FVSAA +LRP CGV+R+L++KLS + P G  K+KV+  IA+E+ ++WD T
Sbjct: 127 DNFEKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRTPMGEVKLKVMKEIAKEYQIEWDTT 186

Query: 181 SFGEKEMKPPEDLL 194
               + +KPPE+L+
Sbjct: 187 ESENELLKPPEELI 200


>GSVIVT01011889001 assembled CDS
          Length = 329

 Score =  224 bits (570), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 97/194 (50%), Positives = 146/194 (75%)

Query: 1   MLHRSFKPGKCKTALKLAVSRIKLLKNKRDSQVKHLKRELAQLLDSGQDQTARIRVEHVV 60
           + +R     KCKT L LA+SRIKLL+NKR   +K +++E+AQ L +GQ+  ARIRVEHV+
Sbjct: 7   LFNRGILGAKCKTCLNLAISRIKLLQNKRSLHLKQMRKEIAQFLQTGQEAIARIRVEHVI 66

Query: 61  REEKTMAAYDLIEIYCELIVARLPIIESQKNCPIDLKEAISSVIFASPRCADIPELMDVR 120
           RE+   AAY+++E++CE ++AR+PI+E+Q+ CP +L+EA++S+IFA+PRC+D+P+L+ ++
Sbjct: 67  REQNIWAAYEILELFCEFVLARVPILETQRECPTELREAVASIIFAAPRCSDVPDLLQIK 126

Query: 121 KHFTAKYGKEFVSAAVELRPDCGVSRLLVEKLSAKAPDGPTKIKVLSAIAEEHDVKWDPT 180
             F AKYGKEF+ AA ELRPD  V+R ++EKLS   P G  K+K L  IA+E++++WD +
Sbjct: 127 NLFAAKYGKEFILAASELRPDTSVNRAIIEKLSVSTPTGEAKLKQLKEIAQEYNLEWDSS 186

Query: 181 SFGEKEMKPPEDLL 194
           +   +  K  EDLL
Sbjct: 187 NTEAEFSKKHEDLL 200


>GSVIVT01005850001 assembled CDS
          Length = 759

 Score =  172 bits (436), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 74/138 (53%), Positives = 107/138 (77%), Gaps = 1/138 (0%)

Query: 58  HVVR-EEKTMAAYDLIEIYCELIVARLPIIESQKNCPIDLKEAISSVIFASPRCADIPEL 116
           HV + E+  +AA + +E++CELI+ARL II  Q++CP DLKE ISS+IFA+PRC+DIPEL
Sbjct: 6   HVPKLEQNILAANEFLELFCELIIARLTIISKQRDCPADLKEGISSLIFAAPRCSDIPEL 65

Query: 117 MDVRKHFTAKYGKEFVSAAVELRPDCGVSRLLVEKLSAKAPDGPTKIKVLSAIAEEHDVK 176
           + +R +F  KYGK+FVSAA +LRP CGV+R+L++KLS + P G  K+KV+  IA+E+ ++
Sbjct: 66  LAIRDNFEKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRTPMGEVKLKVMKEIAKEYQIE 125

Query: 177 WDPTSFGEKEMKPPEDLL 194
           WD T    + +KPPE+L+
Sbjct: 126 WDTTESENELLKPPEELI 143


>GSVIVT01011918001 assembled CDS
          Length = 407

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 114/175 (65%)

Query: 1   MLHRSFKPGKCKTALKLAVSRIKLLKNKRDSQVKHLKRELAQLLDSGQDQTARIRVEHVV 60
           +L R+FK  K +  + LA+SR  +LK +R  +    + ++ QLL+ G  + A IRVE V+
Sbjct: 8   LLGRNFKTSKFRALVNLAISRAAILKKQRQVRCSQARSDVVQLLNLGHHERALIRVEQVI 67

Query: 61  REEKTMAAYDLIEIYCELIVARLPIIESQKNCPIDLKEAISSVIFASPRCADIPELMDVR 120
           +E+  +  Y +IE YC L+V R+ IIE +K CP +LKEA S +++++ RC +  EL ++R
Sbjct: 68  KEQNMLDVYAMIEGYCLLLVERVSIIEEEKVCPDELKEAASGLLYSTSRCGEFQELREIR 127

Query: 121 KHFTAKYGKEFVSAAVELRPDCGVSRLLVEKLSAKAPDGPTKIKVLSAIAEEHDV 175
              T++YGKEFV+ AVELR +CGV+  L++KLS + PD   ++  L  IA E+ +
Sbjct: 128 AVLTSRYGKEFVARAVELRNNCGVNPRLIQKLSVRPPDVEVRLNELKEIASENGI 182


>GSVIVT01031052001 assembled CDS
          Length = 156

 Score =  139 bits (349), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 101/145 (69%), Gaps = 1/145 (0%)

Query: 1   MLHRSFKPGKCKTALKLAVSRIKLLKNKRDSQVKHLKRELAQLLDSGQDQTARIRVEHVV 60
           +L RSFK  K KT + LA+SR+ +LKN+R  +  H + ++ QLL+ G  + A +RVE+V+
Sbjct: 8   LLGRSFKISKLKTLVNLAISRLAVLKNQRQVRCSHARTDVIQLLNLGHQEPALLRVEYVI 67

Query: 61  REEKTMAAYDLIEIYCELIVARLPIIESQKNCPIDLKEAISSVIFASPRCADIPELMDVR 120
           +E+  +  + +IE YC L++ R+ + ++ K CP +LKEA+SS+IFA+ RC   PEL  +R
Sbjct: 68  KEQNMLDVFLMIEAYCHLLIERITLFQN-KECPDELKEAVSSLIFATSRCGGFPELQQIR 126

Query: 121 KHFTAKYGKEFVSAAVELRPDCGVS 145
           + F +++GKEF + A EL+ +CGV+
Sbjct: 127 EMFVSRFGKEFAARAAELQNNCGVN 151


>GSVIVT01030541001 assembled CDS
          Length = 233

 Score =  130 bits (326), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 103/175 (58%)

Query: 7   KPGKCKTALKLAVSRIKLLKNKRDSQVKHLKRELAQLLDSGQDQTARIRVEHVVREEKTM 66
           K  KCK  +     R+KLLKNKR   V+ L+ ++A+LL +G    A  R E + ++E  +
Sbjct: 38  KASKCKKLIMRVQCRLKLLKNKRCCIVRQLREDVAELLKNGHQDVAFKRAEQLFKDESIV 97

Query: 67  AAYDLIEIYCELIVARLPIIESQKNCPIDLKEAISSVIFASPRCADIPELMDVRKHFTAK 126
           A Y+L++ +CE I   L  I   K+CP D+ EAISS+IFAS RC D+PEL  +RK F  +
Sbjct: 98  AVYELLDHFCEFITINLSYIRRHKDCPNDINEAISSLIFASARCGDLPELRAIRKLFGER 157

Query: 127 YGKEFVSAAVELRPDCGVSRLLVEKLSAKAPDGPTKIKVLSAIAEEHDVKWDPTS 181
           YG+ F  +AVEL P   V+  + E LS K+     K +++  IA  + ++  P +
Sbjct: 158 YGQRFAMSAVELYPGNLVNCQVKENLSIKSVSDDMKHRLVDEIARSNSLQQLPLA 212


>GSVIVT01015396001 assembled CDS
          Length = 726

 Score =  117 bits (294), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 109/189 (57%), Gaps = 10/189 (5%)

Query: 1   MLHRSFKPGKCKTALKLAVSRIKLLKNKRDSQVKHLKRELAQLLDSGQDQTARIRVEHVV 60
           +L R F   KCK+ +K   +RI +++ KRD+  K LK+++A LL +G D  A  RVE ++
Sbjct: 5   LLGRGFT-SKCKSWIKGTRTRIDVIRRKRDATQKFLKKDVADLLANGLDINAFGRVEGLL 63

Query: 61  REEKTMAAYDLIEIYCELIVARLPIIESQKNCPIDLKEAISSVIFASPRCADIPELMDVR 120
           +E      YD +E  C+ I+  L I++ Q  CP + +EA+SS++FA+ R +D+PEL D+R
Sbjct: 64  KELMLSWCYDFVEQSCDCILKHLSIMQKQSECPEECREAVSSLMFAAARFSDLPELRDLR 123

Query: 121 KHFTAKYGKEFVSAAVELRPDCGVSRLLVEKLSAKAPDGPTKIKVLSAIAEEHDVKWDPT 180
             F  KYG  +V           V++   E L++K P    KI+++  IA E  ++WD  
Sbjct: 124 NIFQEKYGN-YVEHF--------VNKEFAENLTSKPPTREKKIQLMQDIASEFSIRWDSR 174

Query: 181 SFGEKEMKP 189
           +F +   KP
Sbjct: 175 TFEQTMSKP 183


>GSVIVT01017099001 assembled CDS
          Length = 204

 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 10/190 (5%)

Query: 1   MLHRSFKPGKCKTALKLAVSRIKLLKNKRDSQVKHLKRELAQLLDSGQDQTARIRVEHVV 60
           +L R F   KCK+++K  ++RI++++ +R +    L  ++  LL  G D  A  + E + 
Sbjct: 5   LLGRKF-SSKCKSSIKPTMARIEMVRKRRKAMQNFLTNDIGDLLRRGLDTNAYSKAEGLC 63

Query: 61  REEKTMAAYDLIEIYCELIVARLPIIESQKNCPIDLKEAISSVIFASPRCADIPELMDVR 120
            E   ++ YD I+ +C  I+  L  ++ ++ CP + +EA+SS+IFA+ R AD+PEL ++R
Sbjct: 64  AELNQISCYDFIDQFCGCILDHLSAMQKERECPKECREAVSSLIFAAARMADVPELRELR 123

Query: 121 KHFTAKYGKEFVSAAVELRPDCGVSRLLVEKLSAKAPDGPTKIKVLSAIAEEHDVKWDPT 180
              T +YG    S          V++   EKL +K+     K+++L  IA+E  ++WD  
Sbjct: 124 NILTERYGNSLESF---------VNKEFAEKLKSKSSSKDMKLQLLRDIAQESSIEWDSK 174

Query: 181 SFGEKEMKPP 190
           +  +K   PP
Sbjct: 175 ALEQKLFNPP 184