Jatropha Genome Database

JcCA0316031.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0316031.10 - phase: 0 
         (165 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01035072001 assembled CDS                                       147   2e-36
GSVIVT01035071001 assembled CDS                                       147   3e-36
GSVIVT01035062001 assembled CDS                                       139   5e-34
GSVIVT01035055001 assembled CDS                                       139   6e-34
GSVIVT01035059001 assembled CDS                                       138   1e-33
GSVIVT01035060001 assembled CDS                                       138   1e-33
GSVIVT01035061001 assembled CDS                                       137   2e-33
GSVIVT01035074001 assembled CDS                                       136   4e-33
GSVIVT01035066001 assembled CDS                                       113   4e-26
GSVIVT01035076001 assembled CDS                                       110   4e-25
GSVIVT01035054001 assembled CDS                                       106   4e-24
GSVIVT01035069001 assembled CDS                                       106   4e-24
GSVIVT01035075001 assembled CDS                                        93   5e-20
GSVIVT01028061001 assembled CDS                                        83   8e-17
GSVIVT01035068001 assembled CDS                                        65   1e-11
GSVIVT01020183001 assembled CDS                                        50   5e-07

>GSVIVT01035072001 assembled CDS
          Length = 159

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 110/165 (66%), Gaps = 7/165 (4%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG +TYE ++  S PPAK+FK  VL+    +PKVLP AIK    ++GDGGPGT+++I F 
Sbjct: 1   MGAITYEMEVTSSIPPAKMFKAFVLDVDNLIPKVLPQAIKCVEIIEGDGGPGTIKKINFG 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           EGS  +++K  +D++D+ENF + Y+II GD A++D   +E + +++K   SPDG ++CK 
Sbjct: 61  EGSQFNYVKHWIDSLDKENFTYCYTIIEGD-ALMDN--LESIYYEVKLVASPDGGSICKN 117

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPDA 165
             K +T   +++ ED+I+   EK M    G FK  EAY LANPDA
Sbjct: 118 ISKYHTKGDIQITEDQIKAGKEKAM----GMFKAIEAYLLANPDA 158


>GSVIVT01035071001 assembled CDS
          Length = 159

 Score =  147 bits (370), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 110/165 (66%), Gaps = 7/165 (4%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG ++YE +I  S PPAK+FK  +L+    +PKVLP AIK    ++GDGGPG++++ITF 
Sbjct: 1   MGVISYEHEIISSIPPAKIFKAFILDSDNLIPKVLPQAIKCVEIIEGDGGPGSIKKITFG 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           EGS  +++K  VD ID+ENF + YS+I GD A++ T  +E +S+++K   SP G ++CK 
Sbjct: 61  EGSQFNYVKHRVDGIDKENFTYSYSVIEGD-ALMGT--LESISYEVKLVASPSGGSICKS 117

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPDA 165
           + K +T    E+ ED+I+   EK +    G FK  EAY LANPDA
Sbjct: 118 TSKYHTKGDFEITEDQIKAGKEKAL----GLFKAVEAYLLANPDA 158


>GSVIVT01035062001 assembled CDS
          Length = 159

 Score =  139 bits (351), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 104/165 (63%), Gaps = 7/165 (4%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG  TYE ++  S PPAK+FK  +L+    +PKV P AIKS   +QG+GGPGT+++I F 
Sbjct: 1   MGVFTYESEVTSSIPPAKMFKAAILDSDNLIPKVRPQAIKSVEIIQGEGGPGTIKKIHFG 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           EGS    +   VDAID+ENF F Y+++ GD   + T  +E +S ++K   SPDG ++ K 
Sbjct: 61  EGSKFKSMTHRVDAIDKENFTFSYTVVDGD---VLTGGIESISHELKVVASPDGGSIYKN 117

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPDA 165
           + K +T   VE+ E+ I+G  E+ + +    FK  EAY LA+PDA
Sbjct: 118 TSKYHTKGDVEISEEHIKGGKEEALAL----FKAIEAYVLAHPDA 158


>GSVIVT01035055001 assembled CDS
          Length = 159

 Score =  139 bits (350), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 104/165 (63%), Gaps = 7/165 (4%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG  TYE ++  S PPAK+FK  +L+    +PKV P AIKS   +QG+GGPGT+++I F 
Sbjct: 1   MGVFTYESEVTSSVPPAKMFKAAILDSDNLIPKVRPQAIKSVETIQGEGGPGTIKKIHFG 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           EGS    +   VDAID+ENF F Y+++ GD   + T  +E +S ++K   SPDG ++ K 
Sbjct: 61  EGSKFKSMTHRVDAIDKENFTFSYTVVDGD---VLTGGIESISHELKVVASPDGGSIYKN 117

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPDA 165
           + K +T   VE+ E+ ++G  E+ + +    FK  EAY LA+PDA
Sbjct: 118 TSKYHTKGDVEICEEHVKGGKEEALAL----FKAIEAYVLAHPDA 158


>GSVIVT01035059001 assembled CDS
          Length = 159

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 103/165 (62%), Gaps = 7/165 (4%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG  TYE ++  S PPAK+FK  +L+    +PK+ P  IKS   LQG GGPGT+++I F 
Sbjct: 1   MGVFTYESEVTSSVPPAKMFKAAILDSDNLIPKIRPQDIKSVEILQGQGGPGTIKKIHFG 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           EG     +   VDAID+ENF F Y++I GD   + TS +E +S ++K   SPDG  + K 
Sbjct: 61  EGRKFKSMTHRVDAIDKENFTFSYTVIDGD---VLTSGIESISHELKVVASPDGGCIYKN 117

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPDA 165
           + K +T  GVE+ E+ ++G  E+++ +    FK  EAY LA+PDA
Sbjct: 118 TKKYHTKAGVEISEEHVKGGKEESLAL----FKAIEAYVLAHPDA 158


>GSVIVT01035060001 assembled CDS
          Length = 159

 Score =  138 bits (347), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 103/165 (62%), Gaps = 7/165 (4%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG  TYE ++  S PPAK+FK  +L+    +PK+ P  IKS   LQG GGPGT+++I F 
Sbjct: 1   MGVFTYESEVTSSVPPAKMFKAAILDSDNLIPKIRPQDIKSVEILQGQGGPGTIKKIHFG 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           EG     +   VDAID+ENF F Y++I GD   + TS +E +S ++K   SPDG  + K 
Sbjct: 61  EGRKFKSMTHRVDAIDKENFSFSYTVIDGD---VLTSGIESLSHEVKVVASPDGGCIFKN 117

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPDA 165
           + K +T  GVE+ E+ ++G  E+++ +    FK  EAY LA+PDA
Sbjct: 118 TKKYHTKAGVEISEEHVKGGKEESLAL----FKAIEAYLLAHPDA 158


>GSVIVT01035061001 assembled CDS
          Length = 159

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 103/165 (62%), Gaps = 7/165 (4%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG  TYE ++  S PPAK+FK  +L+    +PK+ P  IKS   LQG GGPGT+++I F 
Sbjct: 1   MGVFTYESEVTSSVPPAKMFKASILDSDNLIPKIRPQDIKSVEILQGQGGPGTIKKIHFG 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           EG     +   +DAID+ENF F Y++I GD   + TS +E +S ++K   SPDG  + K 
Sbjct: 61  EGRKFKSMTHRIDAIDKENFSFSYTVIDGD---VLTSGIESISHELKVVASPDGGCIYKN 117

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPDA 165
           + K +T  GVE+ E+ ++G  E+++ V    FK  EAY LA+PDA
Sbjct: 118 TKKYHTKAGVEISEEHVKGGKEESLAV----FKAIEAYILAHPDA 158


>GSVIVT01035074001 assembled CDS
          Length = 158

 Score =  136 bits (343), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 105/165 (63%), Gaps = 7/165 (4%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG VTY  ++    P  +LFK ++LE    LPK++P AIKS   ++G+GGPGT++Q+ F 
Sbjct: 1   MGVVTYTDELTSPVPAPRLFKALILEADSLLPKIVPQAIKSIETVEGNGGPGTIKQLNFA 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           EGS   ++K  +D +D+E  I++Y++I GD A++D   +E +S++I FE SPDG    K 
Sbjct: 61  EGSQFKYVKHRIDELDKEKMIYKYTLIEGD-ALMDK--IEYISYEISFEASPDGGCKSKN 117

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPDA 165
               ++  GVE+KE+EI+   EK   V    FK  EAY LANPDA
Sbjct: 118 VSVYHSKPGVEIKEEEIKDGKEKAAAV----FKAVEAYLLANPDA 158


>GSVIVT01035066001 assembled CDS
          Length = 132

 Score =  113 bits (283), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 86/165 (52%), Gaps = 34/165 (20%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG +TYE ++  S PPAK+FK  VL+    +PK+LP AIK+   +QGDGGPGT+++I F 
Sbjct: 1   MGVITYEMEVTSSIPPAKMFKASVLDADNLIPKILPQAIKNVEIIQGDGGPGTIKKIYFG 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           EGS    +   VD ID+ENF + Y                              R++CK 
Sbjct: 61  EGSQFKSVTHRVDGIDKENFTYSY------------------------------RSICKN 90

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPDA 165
             K +T D   + E++I+   EK      G FK  EAY LANPDA
Sbjct: 91  ISKYHTKDDAVIDEEQIKAGKEKAS----GMFKAIEAYLLANPDA 131


>GSVIVT01035076001 assembled CDS
          Length = 159

 Score =  110 bits (274), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 99/163 (60%), Gaps = 8/163 (4%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG  ++  +      P+++FK ++L+    +PK+LP  I+S   +QGDGG GT+ Q+ F 
Sbjct: 1   MGVTSFTQEFTCPIAPSRIFKALILDSNNLIPKLLPQTIRSIDVVQGDGGAGTIEQVNFT 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           E S + ++K  ++ +D+ENF+ +Y +I GD  ++   L E ++ ++KFE + DG ++CK 
Sbjct: 61  EASNLKYVKHQIEELDKENFVCKYRMIEGD--VLGEEL-ESIAHEVKFE-AADGGSICKM 116

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANP 163
           + + +T    E+KE+EI+    + M    G +K+ EAY L NP
Sbjct: 117 ASEYHTKGKFEIKEEEIKAGKARAM----GIYKVVEAYLLENP 155


>GSVIVT01035054001 assembled CDS
          Length = 160

 Score =  106 bits (265), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 95/164 (57%), Gaps = 7/164 (4%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG  T+  +      PA++FK +V++  I +P+++P ++KS   ++GDGG G++ Q  F 
Sbjct: 1   MGVTTFTQEFVTPVSPARMFKALVVDSHILVPRLVPESVKSIEFVEGDGGAGSITQTNFS 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
             S   +LK  ++A+D+E     Y++I G   ++   L E + +++KFE S DG  +CK 
Sbjct: 61  GDSDCEYLKYKINAVDKEKLECRYTLIEG--GVLGDQL-ESIVYEMKFEESGDGGCICKT 117

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPD 164
             + +T    E+KE+ IR   EK M    G +KL EAY LANPD
Sbjct: 118 RSEYHTKGEFEIKEESIREGKEKAM----GVYKLVEAYLLANPD 157


>GSVIVT01035069001 assembled CDS
          Length = 109

 Score =  106 bits (265), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 78/108 (72%), Gaps = 3/108 (2%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG +TYE +I  S PPAK+FK  +L+    +PK+LP AIKS   ++GDGGPG++++ITF 
Sbjct: 1   MGVITYEHEITSSIPPAKMFKAFILDSDKLIPKILPQAIKSTEIIEGDGGPGSIKKITFR 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKF 108
           EGS  +++K  VD ID+ENF + YS+I GD A++ T  +E +S+++K 
Sbjct: 61  EGSQFNYVKHRVDGIDKENFTYTYSVIEGD-ALMGT--LESISYEVKL 105


>GSVIVT01035075001 assembled CDS
          Length = 161

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 6/165 (3%)

Query: 1   MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
           MG      +      P ++FK ++L+     PK++  +IKS   L+G+G  G+++QI F 
Sbjct: 1   MGVTRLSQKYATHVTPGRMFKALILDSHNLCPKLMFSSIKSIEFLEGEGEVGSIKQINFT 60

Query: 61  EGSPISHLKETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           E SP++++K  +DA+D+E     Y++   D  I+D   +E +++ +KFE    G  VC  
Sbjct: 61  EASPLTYMKHRIDALDKEKLTCTYTMFETDALIMDK--IEYITYDVKFEPYGFGGCVCNL 118

Query: 121 SCKAYTVDGVEVKEDEIRGSLEKTMQVFFGSFKLYEAYALANPDA 165
           +    T   VE++E++I    ++ +    G +++ EAY +A+P A
Sbjct: 119 TSVYKTKGDVEIREEDIEHGKDRAI----GMYEVLEAYLMAHPRA 159


>GSVIVT01028061001 assembled CDS
          Length = 163

 Score = 82.8 bits (203), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 74/112 (66%), Gaps = 6/112 (5%)

Query: 11  EGSTP--PAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFPEGSPISHL 68
           E +TP  PA +FK ++++    +P ++P +IKS   ++GDGG G+++Q  FPEGS   +L
Sbjct: 56  EITTPIAPAIMFKALIVDSHNLVPTLMP-SIKSIEFVEGDGGVGSIKQTNFPEGSHFKYL 114

Query: 69  KETVDAIDEENFIFEYSIIGGDPAIIDTSLVEKMSFQIKFEISPDGRTVCKR 120
           K  +DAID +N+  +Y++I G+  + DT  +E +S+++KFE S  G  +C R
Sbjct: 115 KHRIDAIDHDNYSCKYTLIEGE-VLGDT--LESISYEVKFEASGSGSGLCAR 163


>GSVIVT01035068001 assembled CDS
          Length = 86

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 42/63 (66%)

Query: 1  MGTVTYEGQIEGSTPPAKLFKMIVLEPQIYLPKVLPGAIKSFVNLQGDGGPGTLRQITFP 60
          MG +TYE +I  S PPAK+FK  VL+    +PK+LP  IK    ++GDGG G ++++TF 
Sbjct: 1  MGVITYENEITSSIPPAKMFKAFVLDVDKLIPKILPQTIKCVEIIEGDGGAGIIKKVTFG 60

Query: 61 EGS 63
          EG 
Sbjct: 61 EGC 63


>GSVIVT01020183001 assembled CDS
          Length = 153

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 9/95 (9%)

Query: 31  LPKVLPGAIKSFVNLQGDGGP-GTLRQITFPEGSP-ISHLKETVDAIDEENFIFEYSIIG 88
            PK  P   K    L+GDG   G++R IT+ EGSP +   +E VD +DE +    YS+IG
Sbjct: 29  FPKAFPDQYKCIKVLEGDGKSVGSVRHITYGEGSPLVKESEERVDIVDEADKKVSYSVIG 88

Query: 89  GDPAIIDTSLVEKMSFQIKFEISPDGR-TVCKRSC 122
           GD       L    +F+    I+P G  ++ K +C
Sbjct: 89  GDL------LKYYKNFKATLVITPKGDGSLVKWTC 117