Jatropha Genome Database
- JcCA0309871.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0309871.30 + phase: 0
(254 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01033794001 assembled CDS 127 7e-30
GSVIVT01014791001 assembled CDS 101 4e-22
GSVIVT01033984001 assembled CDS 100 5e-22
GSVIVT01035820001 assembled CDS 100 7e-22
GSVIVT01014793001 assembled CDS 94 5e-20
GSVIVT01035823001 assembled CDS 93 1e-19
GSVIVT01022062001 assembled CDS 89 1e-18
GSVIVT01001131001 assembled CDS 69 1e-12
GSVIVT01033580001 assembled CDS 64 7e-11
GSVIVT01017512001 assembled CDS 52 2e-07
GSVIVT01016554001 assembled CDS 48 5e-06
>GSVIVT01033794001 assembled CDS
Length = 441
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 120/232 (51%), Gaps = 15/232 (6%)
Query: 21 FEINVQELASYLQE-----KRLSNSPLSTQSCIYRVPSVLSSHKEHLFEPNLVSIGPYHR 75
+E+N + LA Q+ + L S + CI+RVP L ++P+++SIGPYHR
Sbjct: 13 WEVNKERLARMQQKISEEPRLLRKSAGRSSCCIFRVPRTLVEINSRSYQPHIISIGPYHR 72
Query: 76 CNLKLQPFEKIKLWYLDRLIARAPTLQTNLECFIQSIGTNAENCYKHYSQELYMSVDEFI 135
L+ E+ K YL LIAR L+ +++++ + YS+ +++ +F+
Sbjct: 73 GEPHLKMIEEHKWLYLGSLIARTQRHGLGLQDYLRALQPLEMEARECYSEIIHLDTHDFL 132
Query: 136 EMLIIDGCFIIEFFRRKEGIVTPRADDPFFRMPWTIKAVTRDLFLLENQIPFLVLESLYN 195
EML++DGCFII+FFR+ + DDP M W RDL LLENQ+PF VL+ L++
Sbjct: 133 EMLVLDGCFIIDFFRKIGKMHPFEPDDPLVSMSWVFSFFLRDLLLLENQLPFFVLQRLFD 192
Query: 196 LTNTTTMPFSQIAYDSLHENALRNYRNPRVIVDSTLQ------NKHLLDLHR 241
LT MP + + SL L + N D LQ KH LDL R
Sbjct: 193 LTK---MP-GEESGPSLASLVLGFFNNTLQRPDEILQKHCNLKGKHFLDLLR 240
>GSVIVT01014791001 assembled CDS
Length = 482
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 21/242 (8%)
Query: 25 VQELASYLQEKRLSNSPLSTQSCIYRVPSVLSSHKEHLFEPNLVSIGPYHRCNLKLQPFE 84
V E+ + ++E L +S S +YRVP + +++ F P ++SIGP+H + L+ E
Sbjct: 32 VIEMNNEIKEGLLCDSGKSW--TVYRVPKSMRGIQKNAFLPKIISIGPFHNKDPGLRIME 89
Query: 85 KIKLWYLDRLIARAP-----------------TLQTNLECFIQSIGTNAENCYKHYSQEL 127
+ K+ YL RL+ P LE +S+ + ++YS++L
Sbjct: 90 EHKMRYLLRLLESGPRENGERVEDSAQQVPQVVKAIRLEDLAESMRMLEQKTRENYSEDL 149
Query: 128 YMSVDEFIEMLIIDGCFIIEFFRRKEGIVTPR-ADDPFFRMPWTIKAVTRDLFLLENQIP 186
+ DE I+M++IDGCF++E R +DP F W ++ + RDL LENQ+P
Sbjct: 150 QIDSDELIQMMVIDGCFVLELLRLYFKFDNEEEVEDPIFTTRWMLRTLQRDLLKLENQLP 209
Query: 187 FLVLESLYNLTNTTTMPFSQIAYDSLHENALRNYRNPRVIVDSTLQNKHLLDLHRNILLS 246
F VLE LY L P + + L +N + ++ + H+LD+ R+ LS
Sbjct: 210 FFVLEKLYELIRLVDDP-PLVDLVVTFFDPLLPRKNIKGKLNPNEEFDHMLDVFRSTFLS 268
Query: 247 GL 248
+
Sbjct: 269 SI 270
>GSVIVT01033984001 assembled CDS
Length = 287
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 5/173 (2%)
Query: 48 IYRVPSVLSSHKEHLFEPNLVSIGPYHRCNLKLQPFEKIKLWYLDRLIARAPTLQTNLEC 107
IY+VP+ L E + P +VSIGP+H+ L E+ K Y+ L+ R P + +L+
Sbjct: 60 IYKVPNKLRHVNEEAYSPRIVSIGPFHQGKRDLLAMEEHKWRYMLSLVHRTPNPEKSLDE 119
Query: 108 FIQSIGTNAENCYKHYSQELYMSVDEFIEMLIIDGCFIIEFFRRKEGIVTPRADDPFFRM 167
+SI E Y++ + + E EML++DGCFI+E F R+ DP F
Sbjct: 120 CGKSIIELEEKARGCYAENIKFNKKELAEMLLVDGCFILELFLRRSLRDFVDKSDPIFNN 179
Query: 168 PWTIKAVTRDLFLLENQIPFLVLESLYNLT---NTTTMP--FSQIAYDSLHEN 215
W + + DL LLENQIPF VL++LY T+P F+ +A H +
Sbjct: 180 AWMVPTLQHDLALLENQIPFFVLQNLYEFILPFAPKTLPRLFTALALSFFHAD 232
>GSVIVT01035820001 assembled CDS
Length = 425
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 100/190 (52%), Gaps = 10/190 (5%)
Query: 26 QELASYLQEKRLSNSPLSTQSCIYRVPSVLSSHKEHLFEPNLVSIGPYHRCNLKLQPFEK 85
+E+A+ LQ + +PLS CIYRVP L + P +VSIGP H L E+
Sbjct: 7 KEVATSLQGRLDRLTPLSATCCIYRVPQKLRKVNMEAYTPRVVSIGPLHHGEEHLIAMEE 66
Query: 86 IKLWYLDRLIARAPTLQTNLECFIQSIGTNAENCYKHYSQELYMSVDEFIEMLIIDGCFI 145
KL YL + R T +T EC ++ I + Y + + MS EF+EM+++DGCFI
Sbjct: 67 HKLRYLQNFLHR--TRKTLEEC-VEIISREEKTARDCYMEPINMSSKEFVEMILVDGCFI 123
Query: 146 IEF---FRRKEGIVTPRADDPFFRMPWTIKAVTRDLFLLENQIPFLVLESLYNLTNTTTM 202
IE F+ G T + DD F PW I V RD+ LLENQ+P +L +LY + +
Sbjct: 124 IEVILGFQNWNG-RTGKPDDRIFNKPWLIYDVRRDMTLLENQLPLFLLLTLY---SQLEV 179
Query: 203 PFSQIAYDSL 212
P Q YDS
Sbjct: 180 PRHQNHYDSF 189
>GSVIVT01014793001 assembled CDS
Length = 450
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 85/159 (53%), Gaps = 6/159 (3%)
Query: 48 IYRVPSVLSSHKEHLFEPNLVSIGPYHRCNLKLQPFEKIKLWYLDRLIA-RAPTLQTNLE 106
IYRVP L ++ F P ++SIGP+H + L+ E+ K+ YL RL+ R P E
Sbjct: 42 IYRVPRNLREVHKNAFVPKIISIGPFHYGDPGLRFMEEHKVRYLLRLLGSRTPEKGGQAE 101
Query: 107 CFI-QSIGTNAENCYKHYSQELYMSVDEFIEMLIIDGCFIIEFFRRKEGIVTPR-ADDPF 164
+ Q + CY + + ++F++M++IDGCF++E R + DDP
Sbjct: 102 ELMSQELEQKTRQCY---TGAFDIDSNDFVQMMVIDGCFVLELLRLYNRFEREKNVDDPI 158
Query: 165 FRMPWTIKAVTRDLFLLENQIPFLVLESLYNLTNTTTMP 203
F + W ++ + RDL LENQ+PF VL+ L+ L + P
Sbjct: 159 FTIRWMLRTLQRDLLKLENQLPFFVLKKLFELISLAEDP 197
>GSVIVT01035823001 assembled CDS
Length = 474
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 26 QELASYLQEKRLSNSPLSTQSCIYRVPSVLSSHKEHLFEPNLVSIGPYHRCNLKLQPFEK 85
+E+A+ LQ +PLST CIYRVP L + P +VSIGP H L E+
Sbjct: 7 KEVATSLQGMLEKLTPLSTTCCIYRVPQKLRKANMEAYTPRVVSIGPLHHGEEHLVAMEE 66
Query: 86 IKLWYLDRLIARAPTLQTNLECFIQSIGTNAENCYKHYSQELYMSVDEFIEMLIIDGCFI 145
KL YL + ++ T +T EC ++ I E +Y + + MS +EF++M+++D CFI
Sbjct: 67 HKLRYLQKFLSE--TRKTLEEC-VEIIYREEEKARGYYMESIKMSREEFVKMILVDACFI 123
Query: 146 IEFFRRKEGIVTPRADDPFFRMPWTIKAVTRDLFLLENQIP 186
IE + D + P V RD+ LLENQ+P
Sbjct: 124 IEVILGFSSSHSIETGDRIYNKPRLFIDVRRDMTLLENQLP 164
>GSVIVT01022062001 assembled CDS
Length = 466
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 47 CIYRVPSVLSSHKEHLFEPNLVSIGPYHRCNLKLQPFEKIKLWYLDRLIARAPTLQTNLE 106
CIYR+P L + + P +VS+GPYH +L+ ++ K L ++ R ++E
Sbjct: 101 CIYRLPHYLREGDDKAYIPQIVSLGPYHHGRRRLRNMDRHKWRSLHHILKRT---NHDIE 157
Query: 107 CFIQSIGTNAENCYKHYSQELYMSVDEFIEMLIIDGCFIIEFFRRKEGIVTPRA---DDP 163
++ ++ E Y + +S +EF+EM+++DGCFI+E FR G +DP
Sbjct: 158 IYLDAMKELEEKARACYEGTICLSSNEFVEMMVLDGCFILELFRGVAGGFKHLGYARNDP 217
Query: 164 FFRMPWTIKAVTRDLFLLENQIPFLVL 190
F + ++ ++ RD+ +LENQIP L
Sbjct: 218 VFAIRGSMHSIQRDMIMLENQIPLFPL 244
>GSVIVT01001131001 assembled CDS
Length = 400
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 45 QSCIYRVPSVLSSHKEHLFEPNLVSIGPYHRCNLKLQPFEKIKLWYLDRLIARAPTLQTN 104
+ IYRVP+ ++ + ++P VS GPYH LQ E K L R+
Sbjct: 26 KRSIYRVPTCVTDLNKKAYKPQAVSFGPYHHGEEHLQTMEDHKRRALLHFFKRSDKPIKL 85
Query: 105 LECFIQSIGTNAENCYKHYSQELYMSVDEFIEMLIIDGCFIIEFFRRKEGIVTP-RADDP 163
L + + + ++ Y F++++I+DGCF++E R + +DP
Sbjct: 86 LVESLAEVVQDLKDSYDLLDPAWQKDTSAFLQLMIVDGCFMLEILRTATHTMDDYDPNDP 145
Query: 164 FFR-------MPWTIKAVTRDLFLLENQIPFLVLESL 193
F MP+ V RD+ +LENQ+P LVL+ L
Sbjct: 146 IFSDHGRLYIMPY----VRRDMLMLENQLPMLVLDKL 178
>GSVIVT01033580001 assembled CDS
Length = 476
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 13 ISMIQHMNFEIN--VQELASYLQEKRLS---NSPLSTQSC---------IYRVPSVLSSH 58
I+ QH I+ V++ AS +EKR P ++ I +VP +L
Sbjct: 37 IASKQHEKTRIDIVVEDNASSSREKRFKSVMGGPEDSKRSQLSETKWARIPKVPHMLRGT 96
Query: 59 KEH--LFEPNLVSIGPYHRCNLKLQPFEKIKLWYLDRLIARAPTLQTNLECFIQSIGTNA 116
K+ LFEP +VS+GPYH L+ E +K R I + L I S +
Sbjct: 97 KDFKILFEPRVVSVGPYHHHKHDLRAAEMLKRLMTKRFILESRQAIEVLYNKIVSEISEL 156
Query: 117 ENCYKHYSQELYMSVDEFIEMLIIDGCFIIEFFR--RKEGIVTPRADDPFFRMPWTIKAV 174
NCY + + Y D M+++DGC ++ F R EG + D P
Sbjct: 157 RNCYNKNATKKYNDED-LAWMMLVDGCSLLHFIRCYTTEGKLK---DLPIKYH--NAAFA 210
Query: 175 TRDLFLLENQIPFLVLESL 193
+DLFLLENQ+PF VLE L
Sbjct: 211 QQDLFLLENQLPFRVLELL 229
>GSVIVT01017512001 assembled CDS
Length = 583
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 11/162 (6%)
Query: 48 IYRVPSVLSSHKEHLFEPNLVSIGPYHRCNLKLQPFEKIKLWYLDRLIARAPTLQTNLEC 107
I+ VP L + K + P V +GPYH +L E+ K+ R + N E
Sbjct: 54 IFNVPKTLMATKPDCYVPQQVGLGPYHHLQQELYEMERYKIAAAKR--TKKHLQSENFES 111
Query: 108 FIQSIGTNAENCYKHYSQELYMSVDEFIEMLIIDGCFIIEFFRR---KEGIVTPRADD-- 162
I+ + + Y + L + M+++D F++EF + +E PR
Sbjct: 112 LIKQLNEHESRIRACYHKFLDFDGETLALMMLVDASFLLEFLQVYAIREERALPRVFHRK 171
Query: 163 ----PFFRMPWTIKAVTRDLFLLENQIPFLVLESLYNLTNTT 200
+ R + RD+ ++ENQIP VL+ + +T
Sbjct: 172 SHLLDYARTKSAYNEILRDMVMVENQIPLFVLKQVLEFQFST 213
>GSVIVT01016554001 assembled CDS
Length = 421
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 19/140 (13%)
Query: 27 ELASYLQEKRLSNSPLSTQS----CIYRVPSVLSSHKEHLFEPNLVSIGPYHRCNLKLQP 82
EL +Q +R + L S CI+ VP L + K + P V++GPYHR +L
Sbjct: 11 ELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYHRWRPELYE 70
Query: 83 FEKIKLWYLDRLIARAPTLQTNLE-----CFIQSIGTNAENCYKHYSQELYMSVDEFIEM 137
E+ KL A A +Q NL+ + + + Y + L + + M
Sbjct: 71 MERYKL-------AAAKRIQKNLQSLKFHSLVDQLTKHEPRIRACYHKFLEFNGETLAWM 123
Query: 138 LIIDGCFIIEF---FRRKEG 154
+ ID F++EF + KEG
Sbjct: 124 MAIDASFLLEFLQVYAMKEG 143