Jatropha Genome Database
- JcCA0307481.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0307481.10 + phase: 0
(345 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01003198001 assembled CDS 101 4e-22
GSVIVT01017697001 assembled CDS 97 1e-20
GSVIVT01003200001 assembled CDS 91 1e-18
GSVIVT01014322001 assembled CDS 74 1e-13
GSVIVT01016837001 assembled CDS 69 4e-12
GSVIVT01016843001 assembled CDS 67 8e-12
GSVIVT01010161001 assembled CDS 65 5e-11
GSVIVT01038063001 assembled CDS 64 1e-10
GSVIVT01038076001 assembled CDS 60 1e-09
GSVIVT01003193001 assembled CDS 60 2e-09
GSVIVT01025608001 assembled CDS 60 2e-09
>GSVIVT01003198001 assembled CDS
Length = 340
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 150/291 (51%), Gaps = 29/291 (9%)
Query: 35 KSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLADFINQTLIRRPSTSPPLQ 94
K + TS+L ++W++LW + +L F + + I++TL+ ++ ++
Sbjct: 2 KYVVATSILSKRWQFLWTMVPNLVFRFRRRD-------EHFVNSIDKTLVLHQNSQ--IK 52
Query: 95 KFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREFQTSDIESDYDFPFFLLKN 154
KF + F ++ SS V+ W+R+A +V++L L F + + ++S ++ + P FL N
Sbjct: 53 KFLIDFTYQSQFQSS-VNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYAN 111
Query: 155 GNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDEMVSNLISGCVNLVFLGLEYC 214
++ L L C I PT V S LK++ + V L D+++ ++SGC L L L +C
Sbjct: 112 SSIVKLSLWFCNIK-PTWVISW--PSLKTLSIGSVELCDDLIEEILSGCPALESLELHHC 168
Query: 215 YGMKDVKICSLKITVLHLNYFTCEDGS-----LEISCPNLVSLEMIG-FHVEKYDFKNLS 268
+G+ + I S + L +N + S L+IS PN+ SL ++G + ++ KN+
Sbjct: 169 FGINSLNITSASLKKLVINRYWDSSHSHHRSVLKISAPNVQSLGILGNMYTKECRVKNVP 228
Query: 269 GLVEAGVAF-LHMWK-----YYRHWSQVMRFLL----HVKRLTVQNWWFKV 309
L +A + F L M + +Y+ + +V+ LL HVK LTV W +V
Sbjct: 229 SLFDASLNFELAMQEGNPKDHYKLYHKVVMKLLKSVNHVKALTVGTWCIQV 279
>GSVIVT01017697001 assembled CDS
Length = 487
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 148/288 (51%), Gaps = 33/288 (11%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSV------STATS- 69
L +LP++IL+ I+S L K A++T +L ++WR +W S L F +SV ST+ S
Sbjct: 18 LVELPDDILSTIISLLPLKEAVRTGILSKRWRSIWTCHSELWFDAASVLGIGDCSTSMSG 77
Query: 70 --------IPARSLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILH 121
+ + + ++Q + R S + F + F + + SH+D W+ A++
Sbjct: 78 NQPELNSQMQSSKFVERVDQFMYYR-SQGRKINSFSIHFPLGKE-FMSHIDQWITCAVMK 135
Query: 122 HVQQLELD------FYISREFQTSDIESDYDFP--FFLLKNG--NVKILKLTKCRIT-LP 170
V+ ++LD F + R+ +S Y+FP F + G +K L+L C ++ LP
Sbjct: 136 GVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPGGRCTLKHLRLASCHLSALP 195
Query: 171 TNVASMGLSFLKSVFLDQVYLSDEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVL 230
+ S L+ L +V L +V +SD+ + +L+S C +L +L L C G+ ++ +L + +
Sbjct: 196 S---SNTLTSLITVDLQRVNISDQQLQDLLSTCSHLEWLSLCVCNGLVNLSFSALNLQLK 252
Query: 231 HLNYFTC-EDGSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEAGVAF 277
L+ C ++EI +LV+ + G H+ + FKN+ L +A + F
Sbjct: 253 FLSIKNCFRLETIEIHAADLVTFKY-GGHLPSFSFKNVPKLAKASLEF 299
>GSVIVT01003200001 assembled CDS
Length = 452
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 44/328 (13%)
Query: 11 SAVDHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSI 70
S VD +++LP+ +L HILSFL +AI+T +L +++ Y W +L F S
Sbjct: 32 SRVDR-ISELPDLVLVHILSFLPMDAAIRTGVLSKRFAYKWASTPNLVFDQDS-----EW 85
Query: 71 PARSLADFINQT-LIRRPSTSPPLQKFHLQFD-----FKEHLYSSHVDSWVRYAILHHVQ 124
F+N+ L+ P+ +QKF + D + L V W+R+A V+
Sbjct: 86 EIDDFITFVNRALLLHDPNCK--VQKFTIYMDCMDQVIENSLQEDCVTLWLRFATRKGVE 143
Query: 125 QLELDFYISREFQTSDIESDYD-----FPFFLLKNGNVKILKLTKCRITLPTNVASMGL- 178
+L L F E ES YD P F+ ++ + + L C N + G+
Sbjct: 144 KLNLGFN-DEEDPLQLWESRYDSYRYLLPQFIFRHSSFRKLATRFC------NFVTYGVV 196
Query: 179 --SFLKSVFLDQVYLSDEMVSNLISGCVNLVFLGLEYCYGMKDVKICS---LKITVLHLN 233
++LKS+ + L++E + N++ G L L C+G + ICS K+++L
Sbjct: 197 SWAWLKSLSIGYAELNEETIRNILMGSPALECLEFHRCHGFARINICSESLKKLSILEPW 256
Query: 234 YFTCEDGS--LEISCPNLVSLEMIGFHVEKYDFKNLSGLVEA--GVAFLHMWKYYRHWS- 288
+G LE+S PN+ SLE+ G + ++S LV A + +H + ++++S
Sbjct: 257 APNDAEGETVLEVSAPNIRSLELSGNWEKMCRLLDMSSLVNAKLDIQMMHQDRNFQYFSE 316
Query: 289 -------QVMRFLLHVKRLTVQNWWFKV 309
++++ L HV+ LTV W +V
Sbjct: 317 DYSNMLREILKHLSHVENLTVGTWCLEV 344
>GSVIVT01014322001 assembled CDS
Length = 402
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 34/262 (12%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFP-------YSSVSTATS 69
L++LP+EIL ILS L+ + A TS+L ++WRYLW S LNF S S A S
Sbjct: 24 LSELPDEILISILSRLTLREAAATSVLSQRWRYLWTYTSRLNFDSVVNKIVRRSHSFALS 83
Query: 70 IPARSLADFIN-----QTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQ 124
A ++ + L +F + FD + S +D W +A+ +V+
Sbjct: 84 TAAGRRRRRRKYIKWVHKVLAKYRGGRNLDEFRVCFDLSKR-SRSDIDKWFEFAMSKNVK 142
Query: 125 QLELDFY-ISREFQTSD--------IESDYDFPFFLLKNGNVKILKLTKCRITLPTNVAS 175
LE DF S + Q D ++ Y FP +IL + + R N
Sbjct: 143 NLEFDFLRCSSQNQDRDPWFVMLSYFQNFYKFPH--------RILGVREAR---DPNGMF 191
Query: 176 MGLSFLKSVFLDQVYLSDEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYF 235
+G LK++ L + +S E V +S C L L + + ++++ I + HL
Sbjct: 192 VGFKSLKTLSLKSINVSSEAVEYFLSNCPLLERLSVHGSESLVNLRVAGPSIMLRHLEIV 251
Query: 236 TCED-GSLEISCPNLVSLEMIG 256
C ++EI NLVS G
Sbjct: 252 KCSSIQTIEICDTNLVSFTYRG 273
>GSVIVT01016837001 assembled CDS
Length = 521
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 16/235 (6%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSS----LNFPYSSVSTATSIPARSL 75
LP++IL IL L TK ++SLL + WR L S P S + S
Sbjct: 11 LPDDILIRILGLLPTKDVARSSLLSQAWRKLSPFSSLSLLMFQCPDFLESCRKNTDVSSF 70
Query: 76 ADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISRE 135
+ I+ +L RP L + L D + S +DSW+ A+ V+ ELD Y+
Sbjct: 71 INAIDSSLRLRPKDV-NLARLRLHLDLDDIESESLIDSWIDAALERKVK--ELDLYL--- 124
Query: 136 FQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDEM 195
+ I Y P + + +L L +CR+ + + L L+ + L Q+ ++
Sbjct: 125 -RPRSIAKPYGLPAKIFSTTTITVLSLEQCRLEI---CGDIDLPALRKLCLRQIRCDEQA 180
Query: 196 VSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCED-GSLEISCPNL 249
+ LIS C + L + C G++ + + L + L C + +EI P+L
Sbjct: 181 IRQLISSCPLIEDLDIASCGGLQKLHVSGLA-NLHRLEVICCYNLRRIEIDAPSL 234
>GSVIVT01016843001 assembled CDS
Length = 552
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 20/237 (8%)
Query: 20 LPEEILTHILSFLSTKSAIQTSLLCRKWRYL--WCQLSSLNFPYSSV--STATSIPARSL 75
LP++IL ILS L TK +TSLL + WR L + LS L F S + S
Sbjct: 43 LPDDILIRILSLLPTKEIARTSLLSKAWRKLSPFSSLSVLMFQSPDFFHSRRKNFDVSSF 102
Query: 76 ADFINQTL-IRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISR 134
+ I+ +L +R+ S L + L+ + S +DSW+ A+ V+ ELD Y+
Sbjct: 103 INAIDSSLRLRQKDVS--LARLQLRLHLNDIESESLIDSWIDAALERKVK--ELDLYL-- 156
Query: 135 EFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLSDE 194
I Y P + + +L L +CR+ + +V L L+ + L ++ ++
Sbjct: 157 --LPRSIPEPYGLPAKIFSTTTITVLSLEQCRLEICGDV---DLPALRKLCLRKILCDEQ 211
Query: 195 MVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTC--EDGSLEISCPNL 249
+ LIS C + L + C +K + + L LH TC +EI P+L
Sbjct: 212 AIRQLISSCPLIEDLDIVSCGKLKKLHVSGL--ANLHRLVVTCCYNLRRIEIDAPSL 266
>GSVIVT01010161001 assembled CDS
Length = 452
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 121/300 (40%), Gaps = 48/300 (16%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSL---NFPYSSVSTATSIPAR 73
++DLP I+ +IL L A+ TS+L +KWRY W L L N +
Sbjct: 45 ISDLPNNIIENILMRLPICDAVGTSILSKKWRYKWLTLPHLVIDNALGKKLLGRQQSAKN 104
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYIS 133
L + Q L+ P+ KF L+ D E S +D W+ + H +Q
Sbjct: 105 ELVSAVYQVLLLHKG---PIVKFVLEVDELESY--SDIDHWINFLSNHDIQ--------- 150
Query: 134 REFQTSDIESD-YDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLS 192
EF S +++ Y P + +++ LKL C P G S L S+ L+ + +
Sbjct: 151 -EFTLSRAKTEHYKLPSYFFTFLHLRHLKLRGCAFRPPPRFK--GFSKLISLQLEDILMD 207
Query: 193 DEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFTCEDGSLEISCPNLVSL 252
E +LIS C L L + Y + SLEIS PNL S
Sbjct: 208 AETFGSLISSCPLLEQLTVS--------------------GYIPYD--SLEISAPNLKSF 245
Query: 253 EMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYRHWS----QVMRFLLHVKRLTVQNWWFK 308
G FKN L E VA + K +H S ++ R L V++L ++ ++ +
Sbjct: 246 SFTG-DFGSICFKNTLLLAEVTVALCRVNKNVKHQSSNLIKIGRSLPAVEKLYLEGYFLE 304
>GSVIVT01038063001 assembled CDS
Length = 348
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 128/274 (46%), Gaps = 55/274 (20%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARSLA 76
+++LP+E+L HILSFL TK A+ TS+L ++WRYLW + L+F
Sbjct: 12 ISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDF----------------- 54
Query: 77 DFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYISREF 136
+ L PST L++ + F + VD +R++ + +++ L + R+
Sbjct: 55 ---DDELWLNPSTLVELEERIIMF-------QNFVDGVLRHSEVSCIKKFRLGY---RDN 101
Query: 137 QTSDIESDYDFPFFLLKNGNVKILKLTKCRITL--PTNVASMGLSFLKSVFLDQV-YLSD 193
+ + FF+ K + ++KL+ C + L PT V L LK++ L V Y D
Sbjct: 102 NLDNWGVELPPMFFICK--TLVVVKLS-CALFLDIPTTV---WLPSLKALHLKSVEYSDD 155
Query: 194 EMVSNLISGCVNLVFLGLEYCYGMKD----VKICSLKITVLHLNYFT----------CED 239
+ + L+SGC L L +E +D V + + + +L + +FT +D
Sbjct: 156 DSIQKLLSGCPVLEELVIE--REERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQD 213
Query: 240 GSLEISCPNLVSLEMIGFHVEKYDFKNLSGLVEA 273
+ + PNL L + + + Y K+L LV+A
Sbjct: 214 YKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKA 247
>GSVIVT01038076001 assembled CDS
Length = 411
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 11/125 (8%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPARS-- 74
+++LP+ +L HI+SFL TK A+ TS+L ++WRYLW + +L+F + S
Sbjct: 12 ISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDSER 71
Query: 75 ---LADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFY 131
+F+++ L+ + ++KF L+ +H S V+SW+ A+ +VQ ELD Y
Sbjct: 72 SICFKNFVDKVLLH--GSISCIRKFRLK--CSDHELDSAVNSWICTALERNVQ--ELDLY 125
Query: 132 ISREF 136
E+
Sbjct: 126 FDTEY 130
>GSVIVT01003193001 assembled CDS
Length = 430
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 21/241 (8%)
Query: 14 DHSLNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLSSLNFPYSSVSTATSIPAR 73
+H DLP +++ I SFL K +Q + ++R W L+F R
Sbjct: 23 NHPQKDLPYDVVEKIFSFLPIKKVVQLGTVSMRFRNSWFINRKLHFDEDFAKGR----GR 78
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYIS 133
+I ++ R S + F L F+ S +SW+R ++ V++L+LDF
Sbjct: 79 EEIMWILNSVFRHHLGS-KIDSFRLYFNHDG--MESKAESWIRKSVKKGVEELDLDFRQG 135
Query: 134 RE-FQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYLS 192
+E FQ I SD L+ ++++LKL+ C + LP + GL L ++ L ++ S
Sbjct: 136 KEPFQ---IVSD------LIDVESIRVLKLSFCELHLP--LKPKGLCSLNTLVLRKMPAS 184
Query: 193 DEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVL-HLNYFTCED-GSLEISCPNLV 250
+ ++ + + C+ L L L +C + +KI + K+ L C D S+ IS P L
Sbjct: 185 EGLIQTVFANCLLLENLELLHCSKVFHLKISTGKLKRFRELKVVECTDLSSIHISAPTLR 244
Query: 251 S 251
S
Sbjct: 245 S 245
>GSVIVT01025608001 assembled CDS
Length = 474
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 127/301 (42%), Gaps = 48/301 (15%)
Query: 17 LNDLPEEILTHILSFLSTKSAIQTSLLCRKWRYLWCQLS-SLNFPYSSVST--ATSIPAR 73
++ LP EIL I+S L K A++TS L WR LW L L F ++ A+ A+
Sbjct: 27 ISKLPPEILGRIVSLLPLKQAVRTSSLSTPWRSLWAPLQVDLYFASDQMTGQEASKEAAQ 86
Query: 74 SLADFINQTLIRRPSTSPPLQKFHLQFDFKEHLYSSHVDSWVRYAILHHVQQLELDFYIS 133
+A F+ R P KF L + S V + A + ++L L+F
Sbjct: 87 VMATFL------RSCQRPQQWKFRLGLQKNKQEPSKTVQQLLVLATMGVDKELHLNFCDG 140
Query: 134 REFQTSDIESDYDFPFFLLKNGNVKILKLTKCRITLPTNVASMGLSFLKSVFLDQVYL-S 192
+ NV ++TL + GLS LKS+ L V L +
Sbjct: 141 EQVP------------------NV-------FQLTLGLTTKTSGLSSLKSLHLRSVTLFA 175
Query: 193 DEMVSNLISGCVNLVFLGLEYCYGMKDVKICSLKITVLHLNYFT---CEDG-SLEISCPN 248
+ +VS L S C+ L L LE C G++ + I + +L FT C D ++++S PN
Sbjct: 176 ENLVSTLFSNCLLLENLKLENCSGLQSINIEAGN----YLESFTVTNCPDMVNIKVSAPN 231
Query: 249 LVSLEMIGFHVEKYDFKNLSGLVEAGVAFLHMWKYYRHWSQVMRFLL----HVKRLTVQN 304
L S + G + KN S L++ + Y + + +LL V+ LT+
Sbjct: 232 LESFKYQGV-LPLIQLKNTSNLIDVVLNLRDGLGYTEFDCEELLYLLASLKEVEILTISG 290
Query: 305 W 305
W
Sbjct: 291 W 291