Jatropha Genome Database
- JcCA0307381.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0307381.20 - phase: 0
(183 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01035968001 assembled CDS 173 4e-44
GSVIVT01037852001 assembled CDS 111 2e-25
GSVIVT01000130001 assembled CDS 105 1e-23
GSVIVT01000534001 assembled CDS 88 3e-18
GSVIVT01012508001 assembled CDS 82 1e-16
GSVIVT01021598001 assembled CDS 79 1e-15
GSVIVT01003773001 assembled CDS 79 2e-15
GSVIVT01025693001 assembled CDS 78 2e-15
GSVIVT01031416001 assembled CDS 74 5e-14
GSVIVT01016261001 assembled CDS 73 6e-14
GSVIVT01000146001 assembled CDS 69 9e-13
GSVIVT01003474001 assembled CDS 69 1e-12
GSVIVT01002274001 assembled CDS 68 2e-12
GSVIVT01004510001 assembled CDS 68 2e-12
GSVIVT01024542001 assembled CDS 65 2e-11
GSVIVT01029878001 assembled CDS 63 7e-11
GSVIVT01010983001 assembled CDS 61 2e-10
GSVIVT01017210001 assembled CDS 60 4e-10
GSVIVT01028637001 assembled CDS 60 5e-10
GSVIVT01027413001 assembled CDS 59 1e-09
GSVIVT01030043001 assembled CDS 50 6e-07
>GSVIVT01035968001 assembled CDS
Length = 597
Score = 173 bits (439), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 110/168 (65%), Gaps = 20/168 (11%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVRASAGVQA 61
+ H +LTKAERKK+CGLMDVKK T++ASMHAAQN+RLPLRVVVQVLFFEQVRA+AG QA
Sbjct: 436 LKAHQNLTKAERKKLCGLMDVKKLTMDASMHAAQNDRLPLRVVVQVLFFEQVRAAAGAQA 495
Query: 62 LNNVPRDATNSTTNTDEEWEKAAADDNKSVKKQMSQLKIKDEELQKTGXXXXXXXXXXXX 121
N++P+ KS+++QM+Q+KIKDEE +K G
Sbjct: 496 PNSIPQSC-------------------KSLRRQMNQMKIKDEEFRKNGKLTKKGSKNSRS 536
Query: 122 GIQLLPSRSRRIFDKLWVVGKGHGGENRXXXXXXXXXXXXXMVPGDTK 169
G+QLLPSRSRR+FDKLW VGK H GENR + PG+TK
Sbjct: 537 GVQLLPSRSRRMFDKLWAVGKKH-GENRSSETSGSSQSPTSVAPGETK 583
>GSVIVT01037852001 assembled CDS
Length = 526
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 93/159 (58%), Gaps = 15/159 (9%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVRASA---- 57
+EHP ++K+ERK+IC LMD KK +V+A MHA QNERLPLRVVVQVLFFEQVRA+A
Sbjct: 338 LKEHPGISKSERKRICRLMDCKKLSVDACMHAVQNERLPLRVVVQVLFFEQVRATATSGS 397
Query: 58 -------GVQALNNVPRDATNS-TTNTDEEWEKAAA-DDNKSVKKQMSQLKIKDEELQKT 108
G++ LN+ ++ S TTNT+E+W+ A ++ K++K +++ L++ +
Sbjct: 398 STPDLPKGIKDLNSASHGSSRSVTTNTEEDWDAVATLEELKALKGELASLRLGNGVGASE 457
Query: 109 GXXXXXXXXXXXXGIQLLPS--RSRRIFDKLWVVGKGHG 145
I + S++IF KLW G G
Sbjct: 458 RNGGDSKGSIDKAAINKMKGLLMSKKIFTKLWSSKSGQG 496
>GSVIVT01000130001 assembled CDS
Length = 586
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 95/164 (57%), Gaps = 30/164 (18%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVRA---SAG 58
+EHP ++K+ERK+IC LMD KK + +A MHA QNERLPLRVVVQVLFFEQVRA SAG
Sbjct: 406 LKEHPGISKSERKRICRLMDCKKLSTDACMHAVQNERLPLRVVVQVLFFEQVRAATSSAG 465
Query: 59 ---------VQALNNVPRDATNS----TTNTDEEWEKA-AADDNKSVKKQMSQLKIKDEE 104
V+AL +P + S TTNT+EEW+ A++ K++K +++ L++
Sbjct: 466 SSTPDLPGSVRAL--LPGGSHGSSRSATTNTEEEWDAVPTAEELKALKGELATLRL---- 519
Query: 105 LQKTGXXXXXXXXXXXXGIQLLPSRSRRIFDKLWVVGKGHGGEN 148
G G+ + S++IF +LW K GEN
Sbjct: 520 --GAGSNAENVAASKVKGLLM----SKKIFSRLW-SSKEKLGEN 556
>GSVIVT01000534001 assembled CDS
Length = 472
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 19/125 (15%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVRASAGVQA 61
+ HP L+K+ERK++C ++D KK +V A MHAAQNE LPLRVVVQVLFFEQ RA+
Sbjct: 316 LKAHPDLSKSERKRLCRILDCKKLSVEACMHAAQNELLPLRVVVQVLFFEQARAAMAGGQ 375
Query: 62 LNNVPRD--ATNSTTNTDEEWEKA--------AADDN------KSVKKQMSQLKIK---D 102
+ +P + A +T N D A AA+D KS K +S L++K D
Sbjct: 376 VTELPNNIKALLATHNVDPSRPPAPLSTTTTVAAEDQWSISGLKSPKSSLSTLRMKLAED 435
Query: 103 EELQK 107
++L++
Sbjct: 436 DDLEE 440
>GSVIVT01012508001 assembled CDS
Length = 577
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVRASAGVQA 61
+ HP+L++ ERK++C +MD +K +++A MHAAQNERLPLR+VVQVLF EQV+ + +
Sbjct: 423 LKAHPTLSEHERKRLCRVMDCQKLSIDACMHAAQNERLPLRIVVQVLFSEQVKINNAIA- 481
Query: 62 LNNVPRDATNSTTNT 76
NN ++A NT
Sbjct: 482 -NNTLKEAAKKDINT 495
>GSVIVT01021598001 assembled CDS
Length = 632
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 6/112 (5%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVRASAGVQA 61
+ HP L++++R+++C LMD +K ++ A HAAQNERLPLR++VQVLFFEQ++ +
Sbjct: 451 LKSHPWLSESDREQLCRLMDCQKLSLEACTHAAQNERLPLRIIVQVLFFEQLQLRTSIAG 510
Query: 62 LNNV------PRDATNSTTNTDEEWEKAAADDNKSVKKQMSQLKIKDEELQK 107
V R + ++E A +N+ +K M ++++ EL+K
Sbjct: 511 CFLVSDNLEGSRQLRSGFAGSNEGGWATAVRENQVLKVGMDNMRLRVSELEK 562
>GSVIVT01003773001 assembled CDS
Length = 593
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 17/123 (13%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR----ASA 57
+ HP + + ER+KICG+MD +K T+ A HAAQNERLPLR VVQVLFFEQ++ +
Sbjct: 409 LKAHPWVAEEEREKICGVMDCQKLTLEACTHAAQNERLPLRAVVQVLFFEQLQLRHAITG 468
Query: 58 GVQALNNVPRDATN-STTNTDEEWE------------KAAADDNKSVKKQMSQLKIKDEE 104
+ A P D+ S ++E E +AA +N+ ++ M ++ + E
Sbjct: 469 SILAAEAAPPDSGRPSNLQLEQEGESAVGAAQDVSTWRAAVRENQVLRLDMDSMRSRVHE 528
Query: 105 LQK 107
L++
Sbjct: 529 LER 531
>GSVIVT01025693001 assembled CDS
Length = 550
Score = 78.2 bits (191), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 49/76 (64%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVRASAGVQA 61
+ HP L +ER++IC LM+ +K ++ AS HAAQNERLPLRV+VQVLFFEQ+R V
Sbjct: 412 LKAHPWLIDSEREQICRLMNCQKLSLEASTHAAQNERLPLRVIVQVLFFEQLRLRTTVSG 471
Query: 62 LNNVPRDATNSTTNTD 77
V + NS D
Sbjct: 472 WFFVSDNLANSQDPND 487
>GSVIVT01031416001 assembled CDS
Length = 611
Score = 73.6 bits (179), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR---ASAG 58
F+ HP L++ E++++C ++D +K +++A HA+QNERLPLRVV+QVLFFEQ++ A AG
Sbjct: 421 FKAHPWLSEKEKEQLCNIIDYQKLSIDACAHASQNERLPLRVVLQVLFFEQMQLRTALAG 480
Query: 59 -VQALNNVPRDATNSTTNTDEEWEKAAADDNKSVKKQMSQLKIKDEELQ 106
+ ++N A T ++D + D +V ++ LK+ E ++
Sbjct: 481 CLHVIDNENAPAGPITISSDMAGQIVQRDGWVTVVRENQVLKVDLERMR 529
>GSVIVT01016261001 assembled CDS
Length = 572
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR 54
+ HP LT +ER+ IC L++ +K ++ AS HAAQNERLPLR++VQVLFFEQ+R
Sbjct: 402 LKAHPWLTDSERELICRLVNCQKLSLEASTHAAQNERLPLRLIVQVLFFEQLR 454
>GSVIVT01000146001 assembled CDS
Length = 529
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR 54
+ HPSL+ E+KK+C LMD +K + A HAAQN+RLP++ VVQVL++EQ R
Sbjct: 404 LKAHPSLSDMEKKKVCSLMDCQKLSREACAHAAQNDRLPVQTVVQVLYYEQQR 456
>GSVIVT01003474001 assembled CDS
Length = 593
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVRA 55
+EHP L KAE+K++C ++D +K + + HA +NERLPLR VVQVLFF+Q R
Sbjct: 422 LKEHPDLNKAEKKRLCRILDCQKLSPDVCAHAVKNERLPLRTVVQVLFFDQERG 475
>GSVIVT01002274001 assembled CDS
Length = 489
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR 54
+ HPSL++ +RK++C +MD +K +++A MHAAQN+RLPLR+V+QV F R
Sbjct: 431 LKTHPSLSEHDRKRLCKVMDYEKLSLDACMHAAQNDRLPLRIVIQVKFLNNSR 483
>GSVIVT01004510001 assembled CDS
Length = 459
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR 54
+ HPSL++ +RK++C +MD +K +++A MHAAQN+RLPLR+V+QV F R
Sbjct: 401 LKTHPSLSEHDRKRLCKVMDYEKLSLDACMHAAQNDRLPLRIVIQVKFLNNSR 453
>GSVIVT01024542001 assembled CDS
Length = 213
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 68/108 (62%), Gaps = 8/108 (7%)
Query: 1 MFQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVRASAGVQ 60
+ HP+L + ER+K+C +MD K + A +HA+QN+RLP+++V+ L+++Q++ +G
Sbjct: 51 FLKAHPNLDEIEREKVCSVMDPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGAD 110
Query: 61 ALNNVPRDATNS-TTNTDEEWEKAAADDNKSVKKQMSQLKIKDEELQK 107
DA ++ +T + + + + +N++++ ++ ++K+ ++QK
Sbjct: 111 -------DAHDAMSTRSHLQADVSLVRENEALRSELMKMKMYISDIQK 151
>GSVIVT01029878001 assembled CDS
Length = 493
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR 54
+ HP LT+ E KK+C +D KK + A HAAQN+RLP+++ V+VL+FEQ+R
Sbjct: 428 LKAHPMLTEHECKKLCKFIDCKKLSQEACNHAAQNDRLPVQMTVRVLYFEQLR 480
>GSVIVT01010983001 assembled CDS
Length = 631
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 5 HPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR 54
HP++ +ER ++C +D +K + A HAAQNERLP+++ VQVL+FEQ+R
Sbjct: 454 HPNIKDSERYRLCKTIDSQKLSQEACSHAAQNERLPVQMAVQVLYFEQIR 503
>GSVIVT01017210001 assembled CDS
Length = 433
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR 54
+ HP ++K +RK +C ++D +K + AS HAA NERLP+R V+QVL EQ +
Sbjct: 241 LKAHPGVSKQDRKVLCRIIDSRKLSPEASFHAAHNERLPVRAVIQVLLSEQTK 293
>GSVIVT01028637001 assembled CDS
Length = 605
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR 54
+ H LT ++KK+ L+D +K + A HAAQNERLPL+ +VQVL+FEQ+R
Sbjct: 432 LKAHQGLTDPDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLYFEQLR 484
>GSVIVT01027413001 assembled CDS
Length = 534
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 2 FQEHPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQVR 54
+H LT+AER++ C ++D ++ + A HAA+NERLPLRVVVQVLF Q++
Sbjct: 372 LDKHKHLTEAEREEACQMLDYQRMSPEALEHAARNERLPLRVVVQVLFVGQLQ 424
>GSVIVT01030043001 assembled CDS
Length = 557
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 5 HPSLTKAERKKICGLMDVKKFTVNASMHAAQNERLPLRVVVQVLFFEQV 53
HP++++ E+ +C +D +K + + A QNE +PLR++VQ LF +Q+
Sbjct: 356 HPNISQEEKGMVCKYLDCQKLSQEVCIEAVQNELMPLRLIVQALFLQQM 404