Jatropha Genome Database

JcCA0306791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306791.10 - phase: 0 /pseudo
         (602 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01025749001 assembled CDS                                       519   e-147
GSVIVT01025748001 assembled CDS                                       513   e-145
GSVIVT01010025001 assembled CDS                                       307   8e-84
GSVIVT01031663001 assembled CDS                                       242   4e-64
GSVIVT01011347001 assembled CDS                                       187   1e-47
GSVIVT01019126001 assembled CDS                                       186   2e-47
GSVIVT01008430001 assembled CDS                                       153   3e-37
GSVIVT01019110001 assembled CDS                                       148   8e-36
GSVIVT01011755001 assembled CDS                                       127   2e-29
GSVIVT01029266001 assembled CDS                                       119   5e-27

>GSVIVT01025749001 assembled CDS
          Length = 557

 Score =  519 bits (1337), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 282/467 (60%), Positives = 327/467 (70%), Gaps = 94/467 (20%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MI +TD YHV+T++VPLYVAMILAYGSVKWWKIF+PDQCSGINRFVALFAVPLLSFHFIS
Sbjct: 1   MIAITDLYHVLTSVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
           +NDPY+MN+RFIAADTLQKIIVLVVLA+W+++S RGCLEW+ITLFSLSTLPNTLVMGIPL
Sbjct: 61  TNDPYAMNYRFIAADTLQKIIVLVVLAIWSRVSSRGCLEWSITLFSLSTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFPDTAGSIVSIHVDSD 180
           LKGMYGE+SG+LMVQIVVLQCIIWYTLMLF+FEYRGA++LI EQFPDTAGSI+S  VDSD
Sbjct: 121 LKGMYGEYSGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFRVDSD 180

Query: 181 IMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLS---STTPRPSNLTNA 237
           ++SLDG++PL+TEAE+ EDGKLHVTVRKS +SRS+IFSRRS G +   S TPRPSNLTNA
Sbjct: 181 VISLDGKEPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGVSLTPRPSNLTNA 240

Query: 238 EIYSLQSSRNPTPRGSSFNHTDFYSMMAAGRNSNFGASDVYGLSASRGPTPRPSNYEEDG 297
           EIYSLQSSRNPTPRGSSFNHTDFYSM                                 G
Sbjct: 241 EIYSLQSSRNPTPRGSSFNHTDFYSM---------------------------------G 267

Query: 298 GGLGNKPRFHYHAAAGAGIATHYPA-PNPGMFSPTGSKGVTANNVGVKKPNGQAQHKSED 356
           GG                    YPA P+ G+FSP G  G        KK NG        
Sbjct: 268 GG--------------------YPAPPSAGIFSPVGGPGAK------KKANGA------- 294

Query: 357 GGGRDLHMFVWSSSASPVSD----VFGGHDYGSHDQKDVRLAVSPGKVPVEGQRENHHHQ 412
            GG+DLHMFVWSSSASPVS+    VF G DYG+         V+ G +P   Q +++   
Sbjct: 295 DGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNE--------VAGGVLP---QTKDYDES 343

Query: 413 EEYMEREDFSFGNR----GVEREMNNHHQ-GEKVIDDGKPKTNASNK 454
            +    ++FSFGNR    G +RE     + G     +  PK  A +K
Sbjct: 344 RQ----DEFSFGNRPVANGGDREGAMMSKLGSSSTAELNPKAAAQSK 386


>GSVIVT01025748001 assembled CDS
          Length = 555

 Score =  513 bits (1321), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 283/469 (60%), Positives = 324/469 (69%), Gaps = 100/469 (21%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MI++TD YHV+TA+VPLYVAMILAYGSVKWWKIF+PDQCSGINRFVALFAVPLLSFHFIS
Sbjct: 1   MISITDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
           +N+PY+MN+RFIAADTLQKIIVLVVLA+W++ S RGCLEW+ITLFSLSTLPNTLVMGIPL
Sbjct: 61  TNNPYAMNYRFIAADTLQKIIVLVVLAIWSRTSSRGCLEWSITLFSLSTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFPDTAGSIVSIHVDSD 180
           +KGMYGE SG+LMVQIVVLQCIIWYTLMLF+FEYRGA++LI EQFPDTAGSI+S  VDSD
Sbjct: 121 MKGMYGEASGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFRVDSD 180

Query: 181 IMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLS---STTPRPSNLTNA 237
           I+SLDG++PL+TEAE+ EDGKLHVTVRKS +SRS+IFSRRS G +   S TPRPSNLTNA
Sbjct: 181 IISLDGKEPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGVSLTPRPSNLTNA 240

Query: 238 EIYSLQSSRNPTPRGSSFNHTDFYSMMAAGRNSNFGASDVYGLSASRGPTPRPSNYEEDG 297
           EIYSLQSSRNPTPRGSSFNHTDFYSM                                 G
Sbjct: 241 EIYSLQSSRNPTPRGSSFNHTDFYSM---------------------------------G 267

Query: 298 GGLGNKPRFHYHAAAGAGIATHYPA-PNPGMFSPTGSKGVTANNVGVKKPNGQAQHKSED 356
           GG                    YPA P+ G+FSP    G        KK NG        
Sbjct: 268 GG--------------------YPAPPSAGIFSPVAGPGAK------KKANGA------- 294

Query: 357 GGGRDLHMFVWSSSASPVSD----VFGGHDYGSHDQKDVRLAVSPGKVPVEGQRENHHHQ 412
            GG+DLHMFVWSSSASPVS+    VF G DYG+            G VP         H 
Sbjct: 295 DGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNEL----------GGVP---------HT 335

Query: 413 EEYME--REDFSFGNR----GVEREMNNHHQ-GEKVIDDGKPKTNASNK 454
           ++Y E  +++FSFGNR    G +RE     + G     +  PKT   +K
Sbjct: 336 KDYDEFGQDEFSFGNRASVNGGDREGPTMSKLGSSSTTELHPKTAPQSK 384


>GSVIVT01010025001 assembled CDS
          Length = 527

 Score =  307 bits (787), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 164/278 (58%), Positives = 206/278 (74%), Gaps = 6/278 (2%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MI+  DFY VM AMVPLY AM++AYGSVKW KIF+P+QCSGINRFVA+FAVP+LSFHFIS
Sbjct: 1   MISADDFYKVMCAMVPLYFAMLVAYGSVKWCKIFSPEQCSGINRFVAVFAVPVLSFHFIS 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
            N+PY M+ +FI ADTL K++VLV+L++W  L K G L+W ITLFSL+TLPNTLVMGIPL
Sbjct: 61  QNNPYEMDTKFIVADTLSKLLVLVLLSVWAILFK-GGLDWLITLFSLATLPNTLVMGIPL 119

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFP-DTAGSIVSIHVDS 179
           L  MYG+F+ SLMVQ+VVLQCIIWYTL+LF+FEYR A +LI  QFP  TA SI    +D 
Sbjct: 120 LNAMYGDFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATLLIKNQFPGSTAASISKFEIDG 179

Query: 180 DIMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEI 239
           D++SLDGR P+ TE+EI  +G++ V +R+S +S  D     S G+   TPR SNL+ AEI
Sbjct: 180 DVISLDGRDPVRTESEIDGNGRIRVRIRRSTSSAPDSALSSSMGI---TPRASNLSGAEI 236

Query: 240 YSLQSSRNP-TPRGSSFNHTDFYSMMAAGRNSNFGASD 276
           +S+ +      PR S +  +D YS+    R SNF   D
Sbjct: 237 FSVNTPAPLHDPRLSGYASSDAYSLQPTPRASNFNELD 274


>GSVIVT01031663001 assembled CDS
          Length = 463

 Score =  242 bits (617), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 109/171 (63%), Positives = 139/171 (81%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MI++ D Y V++A+VPLYV M LAY SVKWW +F+PDQC+GINRFVA+FA+PLLSF  IS
Sbjct: 1   MISIKDLYGVLSAVVPLYVTMFLAYASVKWWNVFSPDQCAGINRFVAIFAIPLLSFEVIS 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
             +PY M+F FIAAD + K+++L++L  W K SKRG L+WTITLFS+STLPNTLVMGIPL
Sbjct: 61  RINPYKMDFLFIAADGVSKVLILIILFSWAKFSKRGSLDWTITLFSISTLPNTLVMGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFPDTAGS 171
           LK MYG+    L++Q VVLQCIIWYTL+LF+FEYR A++ I  +F D++ S
Sbjct: 121 LKSMYGDDKEYLIIQAVVLQCIIWYTLLLFLFEYREARIFILNKFKDSSVS 171


>GSVIVT01011347001 assembled CDS
          Length = 357

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 91/145 (62%), Positives = 113/145 (77%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MI+L D YHV+ A +PLY  MILAY SVKWWKIFTP+QCSGIN+FVA F++PLLSF  IS
Sbjct: 1   MISLADVYHVVAATIPLYFVMILAYISVKWWKIFTPEQCSGINKFVAKFSIPLLSFQLIS 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
            N+PY MN R I +D LQK++ L++LA   K++ RG L W IT  SLSTLPNTL++GIPL
Sbjct: 61  ENNPYQMNMRLILSDFLQKLLALILLATIAKINSRGSLTWVITGLSLSTLPNTLILGIPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWY 145
           LK MYG+ +  L+ QIVVLQ ++WY
Sbjct: 121 LKAMYGDKAAGLLSQIVVLQSLVWY 145


>GSVIVT01019126001 assembled CDS
          Length = 356

 Score =  186 bits (473), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 95/192 (49%), Positives = 127/192 (66%), Gaps = 9/192 (4%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MI   D Y V+ AM+PLYVA++L YGSVKWW+IFTPDQC  INR V  F +PL +F F +
Sbjct: 1   MIGWEDVYKVVVAMLPLYVALVLGYGSVKWWRIFTPDQCDAINRLVCYFTLPLFTFEFTA 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKRGCLEWTITLFSLSTLPNTLVMGIPL 120
             DP+ MN+ FI AD + K+I+++VLALW K S +G   W+IT FSL+TL N+LV+G+PL
Sbjct: 61  HVDPFKMNYLFIGADAVSKLIIVLVLALWAKCSSKGSYCWSITSFSLATLTNSLVVGVPL 120

Query: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFPDTAGSIVSIHVDSD 180
           +K MYG     L+VQ  V+Q IIW TL+LF+ E+R     IS     T G       DS 
Sbjct: 121 IKAMYGPLGVDLVVQSSVVQAIIWLTLLLFVLEFRRTGTGISSN--TTMG-------DSG 171

Query: 181 IMSLDGRQPLET 192
           ++ ++  + LET
Sbjct: 172 VIEVEPGKDLET 183


>GSVIVT01008430001 assembled CDS
          Length = 283

 Score =  153 bits (386), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/124 (68%), Positives = 96/124 (77%), Gaps = 10/124 (8%)

Query: 327 MFSPTGSKGVTANNVGVKKPNGQAQHKSEDGGGRDLHMFVWSSSASPVSDVFGGHDYGSH 386
           MFSPTGSK V A+    KKPNGQAQ K  D G RDLHMFVWSSSASPVSDVFGGH+YG++
Sbjct: 1   MFSPTGSKNV-ASAAAAKKPNGQAQQKP-DEGTRDLHMFVWSSSASPVSDVFGGHEYGAN 58

Query: 387 DQK-DVRLAVSPGKVPVEGQRENHHHQEEYMEREDFSFGNRGVEREMNNHHQGEKVIDDG 445
           DQ    R+AVSPGK  VEG REN   QE+Y+ER+DFSFGNR + +EMNN H+GEKV  DG
Sbjct: 59  DQNVKERVAVSPGK--VEGHREN---QEDYLERDDFSFGNRVLAQEMNN-HEGEKV-GDG 111

Query: 446 KPKT 449
           K K 
Sbjct: 112 KAKA 115


>GSVIVT01019110001 assembled CDS
          Length = 361

 Score =  148 bits (373), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 108/168 (64%), Gaps = 1/168 (0%)

Query: 1   MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
           MI   D Y V+ AM PLYVA++L Y SV+WW +F+ DQC+ INRF+  F  P  SF F S
Sbjct: 1   MIEWGDVYKVVEAMAPLYVALLLGYASVRWWHMFSSDQCAAINRFICYFIFPFYSFDFTS 60

Query: 61  SNDPYSMNFRFIAADTLQKIIVLVVLALWTKLSKR-GCLEWTITLFSLSTLPNTLVMGIP 119
             DP+SMN++++ AD + K I +  L LW K S R G   W +T FSL T+ N+L +G+P
Sbjct: 61  HIDPFSMNYKYMGADIMSKFICVAALGLWCKCSSRTGSYGWFVTCFSLCTMTNSLFIGVP 120

Query: 120 LLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGAKMLISEQFPD 167
           +L+ MYG    +L++Q  V+Q II+ T+ L + E+  + + +++  P+
Sbjct: 121 ILEAMYGRTGVNLVLQASVVQVIIYSTVFLILLEFWKSFVSLNKTIPE 168


>GSVIVT01011755001 assembled CDS
          Length = 110

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 56/70 (80%), Positives = 65/70 (92%)

Query: 1  MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
          MI+  D Y V+TA++PLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFIS
Sbjct: 1  MISWNDLYVVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61 SNDPYSMNFR 70
           N+PY+MNFR
Sbjct: 61 QNNPYAMNFR 70


>GSVIVT01029266001 assembled CDS
          Length = 437

 Score =  119 bits (298), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 61/69 (88%)

Query: 1  MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIS 60
          MI   D Y V+ A+VPLYVAMILAYGSV+WWKIFTP+QC+GINRFVA+FAVPLLSFHFIS
Sbjct: 1  MIRGKDIYDVLAAIVPLYVAMILAYGSVRWWKIFTPEQCAGINRFVAVFAVPLLSFHFIS 60

Query: 61 SNDPYSMNF 69
           ND Y+MN+
Sbjct: 61 LNDIYNMNY 69



 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 89/243 (36%), Gaps = 73/243 (30%)

Query: 252 GSSFNHTDFYSMMAAGRNS----------NFGASDVYGLSASRGPTPRPSNYEEDGGGLG 301
            SSFN TDFY+M A+   S            G +DV+ L +  G                
Sbjct: 88  ASSFNQTDFYAMFASKTASPRHGSIGGVGAGGGADVFSLQSMSGEL-------------- 133

Query: 302 NKPRFHYHAAAGAGIATHYPAPNPGMFSPTGSKGVTANNVGVKKPNGQAQHKSEDGGG-- 359
               FH       G+ + YP PNP MFS + S G                 K E GGG  
Sbjct: 134 ----FH------GGLLSSYPPPNP-MFSGSTSGG---------------PKKKESGGGGA 167

Query: 360 ---RDLHMFVWSSSASPVSDVFGGHDYGSHDQKDVRLAVSPGKVPVEGQRENHHHQEEYM 416
              ++LHMFVWSSSASPVS+    H     +  D  +  S   V           QE   
Sbjct: 168 MPNKELHMFVWSSSASPVSEGNLRHTVNRAESADFGVIDSSKAV---------LQQEIAA 218

Query: 417 EREDFSFGNRGVEREMNNHHQGEKVIDDGKPKTNAS------NKCHDKAYTHNGLEKTHV 470
            R    F N  +   +N   + +  ++DG  +T A+       K  D       +  T V
Sbjct: 219 SRGMLDF-NDTISPRVNGDREAD--MEDGSIRTQAAGTPYSGQKKADMQAKKQQMPPTSV 275

Query: 471 ACR 473
             R
Sbjct: 276 MTR 278