Jatropha Genome Database

JcCA0306761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0306761.10 - phase: 2 /TE/partial
         (374 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01009879001 assembled CDS                                       648   0.0  
GSVIVT01021865001 assembled CDS                                       474   e-134
GSVIVT01024465001 assembled CDS                                       405   e-113
GSVIVT01036052001 assembled CDS                                       292   1e-79
GSVIVT01029930001 assembled CDS                                       132   3e-31

>GSVIVT01009879001 assembled CDS
          Length = 870

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/370 (83%), Positives = 326/370 (88%)

Query: 5   QPSPTSFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQXXXXXXXXXXXXX 64
           +PSPT+FDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQ             
Sbjct: 68  RPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAKDAAD 127

Query: 65  XXXXXXXXXXXXXXXGRKLPPKEESQTFDSNVITPGTEFMAVLSIALQYYIHLRLNYDPG 124
                          GRKLPPK++SQ  DSNVITPGTEFM VLS+ALQYYIHLRLN DPG
Sbjct: 128 AAAEEERLREEFEKEGRKLPPKQQSQVCDSNVITPGTEFMGVLSVALQYYIHLRLNNDPG 187

Query: 125 WKKIKVILSDANVPGEGEHKIMSYIRLQRNLPGYNPNTRHCLYGLDADLIMLALATHEVH 184
           WK IKVILSDANVPGEGEHKIMSYIRLQRNLPG++PNTRHCLYGLDADLIMLALATHEVH
Sbjct: 188 WKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEVH 247

Query: 185 FSILREVVFTPGQQDKCFLCGQMGHLAAGCEGKAKRKAGEFDEKGGEAVAVKKPYQFLNI 244
           FSILRE+VFTPGQQDKCF+CGQMGHLAA CEGKAKRKAGEFDEKG  A  VKKPYQFLNI
Sbjct: 248 FSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVVKKPYQFLNI 307

Query: 245 WTLREYLEFEMRIPNPPFDIDFERVVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLIAV 304
           WTLREYLE+EMRIPN PF+IDFE +VDDFIFMCFFVGNDFLPHMPTLEIREGAINLL+AV
Sbjct: 308 WTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAV 367

Query: 305 YKKEFSTMGGYLTDASKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQSERIKREKAQAR 364
           YKKE   MGGYLTD+SKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQ+ERIKREKAQAR
Sbjct: 368 YKKELRAMGGYLTDSSKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQAR 427

Query: 365 RGDDAEPQFK 374
           RGDDA+PQ K
Sbjct: 428 RGDDADPQVK 437


>GSVIVT01021865001 assembled CDS
          Length = 1083

 Score =  474 bits (1219), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 227/347 (65%), Positives = 269/347 (77%), Gaps = 9/347 (2%)

Query: 5   QPSPTSFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQXXXXXXXXXXXXX 64
           +P+PT++D+VF+ +FDYID LF +VRPR+LLYMAIDGVAPRAKMNQQ             
Sbjct: 65  KPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAKDAAE 124

Query: 65  XXXXXXXXXXXXXXXGRKLPPKEESQTFDSNVITPGTEFMAVLSIALQYYIHLRLNYDPG 124
                          G+ L PKE+ +T DSNVITPGT+FMAVLS+ALQYYIH RLN +PG
Sbjct: 125 AEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHSRLNRNPG 184

Query: 125 WKKIKVILSDANVPGEGEHKIMSYIRLQRNLPGYNPNTRHCLYGLDADLIMLALATHEVH 184
           W   KVILSD+NVPGEGEHKIMSYIR QRNL G+NPNTRHCLYGLDADLIML+LATHEVH
Sbjct: 185 WCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIMLSLATHEVH 244

Query: 185 FSILREVVFTPGQQDKCFLCGQMGHLAAGCEGKAKRKAGEFDEKGGEAVAVKKPYQFLNI 244
           FSILRE++  PGQQ+KC+LCGQ+GHLAA C G          E   +    KK YQFLNI
Sbjct: 245 FSILREMITPPGQQEKCYLCGQVGHLAAECRGI---------EVVDDTPIHKKKYQFLNI 295

Query: 245 WTLREYLEFEMRIPNPPFDIDFERVVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLIAV 304
           W LREYL++++ I NPPF+I+FER++DDF+F+CFFVGNDFLPHMPTLEIREGAINLL+ V
Sbjct: 296 WVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHV 355

Query: 305 YKKEFSTMGGYLTDASKPNLSNVEHFIQAVGSYEDKIFQKRARLHQR 351
           Y++EFS MGGYLTDA +  L  VEHFI++V  YED+IFQKR R+ QR
Sbjct: 356 YRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQR 402


>GSVIVT01024465001 assembled CDS
          Length = 845

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 3/352 (0%)

Query: 6   PSPTSFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQXXXXXXXXXXXXXX 65
           P+P ++ +VF+ +F YIDR+F +VRPRKLLYMAIDGVAPRAKMNQQ              
Sbjct: 50  PAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFRAAKEAADD 109

Query: 66  XXXXXXXXXXXXXXGRKLPPKEESQTFDSNVITPGTEFMAVLSIALQYYIHLRLNYDPGW 125
                            L   ++++  DSNVITPGTEFMA+LS AL+YYIHLR+N DPGW
Sbjct: 110 ASGTERLKTVFESEMEMLALLDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMNLDPGW 169

Query: 126 KKIKVILSDANVPGEGEHKIMSYIRLQRNLPGYNPNTRHCLYGLDADLIMLALATHEVHF 185
           + IKVILSDANVPGEGEHKIMSYIRLQRNLPG++PNTRHCLYGLDADLIMLALATHE+HF
Sbjct: 170 RGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALATHEIHF 229

Query: 186 SILREVVFTPGQQDKCFLCGQMGHLAAGCEGKAKRKAGEFDEKGGEAVAVKKPYQFLNIW 245
           SILRE V    ++DK     +   L      + K K GE   +  E    ++ +QFLNIW
Sbjct: 230 SILREDVHKAYRKDKNNKPRKDSLLV---NKRGKSKQGEVGGEDIEDFISRQKFQFLNIW 286

Query: 246 TLREYLEFEMRIPNPPFDIDFERVVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLIAVY 305
           TLR+YL  +M IP+     D ER++DDF+FMC FVGNDFLPHMP+LEI EGAI+LL+ VY
Sbjct: 287 TLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAIDLLMTVY 346

Query: 306 KKEFSTMGGYLTDASKPNLSNVEHFIQAVGSYEDKIFQKRARLHQRQSERIK 357
           KKEF  +GGYLT++S+  L  VE F+Q VGS+E+ IF+KR+++ +++  R +
Sbjct: 347 KKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRGVRFQ 398


>GSVIVT01036052001 assembled CDS
          Length = 525

 Score =  292 bits (748), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 167/356 (46%), Positives = 208/356 (58%), Gaps = 47/356 (13%)

Query: 8   PTSFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQXXXXXXXXXXXXXXXX 67
           PT+F+EVF  M++YIDR+F +VRPRKLLYMAIDGVAPRAKMNQQ                
Sbjct: 62  PTTFEEVFNNMYEYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRRRRFQTAKDNEIAEA 121

Query: 68  XXXXXXXXXXXXGRKLPPKEESQTFDSNVITPGTEFMAVLSIALQYYIHLRLNYDPGWKK 127
                       G+ L PK+ESQ  D N+ITPGT FM  +S ALQ YI  R+ ++ GWK 
Sbjct: 122 EEQRLRRQFEMEGKPLVPKQESQVSDPNIITPGTVFMHEVSKALQQYICSRMKHEAGWKD 181

Query: 128 IKVILSDANVPGEGEHKIMSYIRLQRNLPGYNPNTRHCLYGLDADLIMLALATHEVHFSI 187
           +KVILSD+NVPGEGEHKIMS+IRLQR+LP YNPNT HCLYGLDADLIMLALATHEVHFSI
Sbjct: 182 LKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLYGLDADLIMLALATHEVHFSI 241

Query: 188 LREVVFTPGQQDKCFLCGQMGHLAAGCEGKAKRKAGEFDE-----------KGGEA-VAV 235
           LRE V T  Q+  C    +             +  G F +           K  E+  ++
Sbjct: 242 LREDVLTLEQRGSCESAVETKTSPPKANSSLVKSRGWFKQVLTVDKTNSFIKNLESKSSI 301

Query: 236 KKPYQFLNIWTLREYLEFEMRIPNPP---FDIDFERVVDDFIFMCFFVGNDFLPHMPTLE 292
           K PYQFL++W LREYLE +M+I +PP    +I+FER+     + C+ V       M  +E
Sbjct: 302 KMPYQFLHVWILREYLELDMKISDPPEKLKEINFERIR---CYECYMVD------MERIE 352

Query: 293 IREGAINLLIAVYKKEFSTMGGYLTDASKPNLSNVEHFIQAVGSYEDKIFQKRARL 348
            ++G+                          L  VE FI  VG+YE+KIF+KR  L
Sbjct: 353 EKKGSF-----------------------VKLKRVEKFILLVGTYEEKIFKKRMAL 385


>GSVIVT01029930001 assembled CDS
          Length = 85

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 65/81 (80%), Positives = 69/81 (85%), Gaps = 1/81 (1%)

Query: 235 VKKPYQFLNIWTLREYLEFEMRIPNPPFDIDFERVVDDFIFMCFFVGND-FLPHMPTLEI 293
           VKKPY+FLNIWTLREYLE+EMRIPN PF IDFE +VDDFIFMCFFVGND FLP M  L I
Sbjct: 2   VKKPYRFLNIWTLREYLEYEMRIPNLPFGIDFEHLVDDFIFMCFFVGNDFFLPRMLALVI 61

Query: 294 REGAINLLIAVYKKEFSTMGG 314
            EGAINLL+AVYKKE   MGG
Sbjct: 62  CEGAINLLMAVYKKELKAMGG 82