Jatropha Genome Database

JcCA0305691.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0305691.20 - phase: 0 
         (323 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01023706001 assembled CDS                                       233   8e-62
GSVIVT01018081001 assembled CDS                                        90   1e-18
GSVIVT01021793001 assembled CDS                                        86   2e-17
GSVIVT01025003001 assembled CDS                                        62   3e-10
GSVIVT01016574001 assembled CDS                                        59   4e-09
GSVIVT01019545001 assembled CDS                                        58   6e-09
GSVIVT01025597001 assembled CDS                                        56   2e-08
GSVIVT01019547001 assembled CDS                                        55   6e-08
GSVIVT01028014001 assembled CDS                                        53   2e-07
GSVIVT01035142001 assembled CDS                                        53   2e-07
GSVIVT01036152001 assembled CDS                                        51   6e-07
GSVIVT01019833001 assembled CDS                                        51   9e-07

>GSVIVT01023706001 assembled CDS
          Length = 234

 Score =  233 bits (594), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 110/129 (85%), Positives = 117/129 (90%)

Query: 143 EPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYGPYDNFHPENSHVLPALMRRFH 202
           +P     A AKIAGIKMCQ YR+Q+ +DAISGMPTNLYGPYDNFHPENSHVLPAL+RRFH
Sbjct: 70  KPQFVILAAAKIAGIKMCQGYRLQHGFDAISGMPTNLYGPYDNFHPENSHVLPALIRRFH 129

Query: 203 EAKVQGAKEVVVWGTGSPLREFLHVDDLADAVVFLMESYSGLEHVNVGSGKEVTIKELAE 262
           EAKV GAKEVVVWGTGSPLREFLHVDDLAD VVFLM+ YSGL HVNVGSGKEVTIKELAE
Sbjct: 130 EAKVSGAKEVVVWGTGSPLREFLHVDDLADGVVFLMDKYSGLVHVNVGSGKEVTIKELAE 189

Query: 263 LMKEVVGFE 271
           L+KEVVGFE
Sbjct: 190 LVKEVVGFE 198



 Score =  110 bits (275), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 52/67 (77%), Positives = 60/67 (89%)

Query: 22 AGHRGLVGSAIVRKLQALGFTNLVLRSHAELDLTRQSDVESFFAAEKPEYVILAAAKVGG 81
          AGHRGLVGSAIVRKLQ LGFTNL+LR+HAELDLTRQ+DV++FFAAEKP++VILAAAK+ G
Sbjct: 24 AGHRGLVGSAIVRKLQQLGFTNLLLRTHAELDLTRQTDVDAFFAAEKPQFVILAAAKIAG 83

Query: 82 IHANNTY 88
          I     Y
Sbjct: 84 IKMCQGY 90


>GSVIVT01018081001 assembled CDS
          Length = 256

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 18/232 (7%)

Query: 99  IQTNVIDSSYRYGVKKLLFLGSSCIYPKLAPQPIPENALLTG----PLEPTNEWYAVAKI 154
           I  N++++S   GVK+  +  S+CIYP+   + +  N  L      P EP +  Y + K+
Sbjct: 2   ISFNMLEASRINGVKRFFYASSACIYPEF--KQLETNVSLKESDAWPAEPQDA-YGLEKL 58

Query: 155 AGIKMCQAYRIQYNWDAISGMPTNLYGPYDNFHPENSHVLPALMRRFHEAKVQGAKEVVV 214
           A  ++C+ Y   +  +   G   N+YGP+  +         A  R+     +    +  +
Sbjct: 59  ATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRK----AITSTDKFEM 114

Query: 215 WGTGSPLREFLHVDDLADAVVFLMESYSGLEHVNVGSGKEVTIKELAELMKEVVGFEGE- 273
           WG G   R F  +D+  + V+ L +S    E VN+GS + V++ E+AE+   V+ FE + 
Sbjct: 115 WGDGLQTRSFTFIDECVEGVLRLTKS-DFREPVNIGSDEMVSMNEMAEI---VLSFENKN 170

Query: 274 -LVWDSSKPDGTPRKLMDSSKLL-GLGWTPKIPLKDGLVDTYKWYLENVIKQ 323
             +     P+G   +  D++ +   LGW P + LKDGL  TY W  E + K+
Sbjct: 171 LPIHHIPGPEGVRGRNSDNNLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKE 222


>GSVIVT01021793001 assembled CDS
          Length = 251

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 18/228 (7%)

Query: 103 VIDSSYRYGVKKLLFLGSSCIYPKLAPQPIPENALLTG----PLEPTNEWYAVAKIAGIK 158
           ++++S   GVK+  +  S+CIYP+   + +  N  L      P EP +  Y + K+A  +
Sbjct: 1   MLEASRINGVKRFFYASSACIYPEF--KQLETNVSLKESDAWPAEPQDA-YGLEKLATEE 57

Query: 159 MCQAYRIQYNWDAISGMPTNLYGPYDNFHPENSHVLPALMRRFHEAKVQGAKEVVVWGTG 218
           +C+ Y   +  +   G   N+YGP+  +         A  R+     +    +  +WG G
Sbjct: 58  LCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRK----ALTSTDKFEMWGDG 113

Query: 219 SPLREFLHVDDLADAVVFLMESYSGLEHVNVGSGKEVTIKELAELMKEVVGFEGE--LVW 276
              R F  +D+  + V+ L +S    E VN+GS + V++ E+AE+   V+ FE +   + 
Sbjct: 114 LQTRSFTFIDECVEGVLRLTKS-DFREPVNIGSDEMVSMNEMAEI---VLSFENKNLPIH 169

Query: 277 DSSKPDGTPRKLMDSSKLL-GLGWTPKIPLKDGLVDTYKWYLENVIKQ 323
               P+G   +  D++ +   LGW P + LKDGL  TY W  E + K+
Sbjct: 170 HIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRITYFWIKEQIEKE 217


>GSVIVT01025003001 assembled CDS
          Length = 346

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 18/219 (8%)

Query: 99  IQTNVIDSSYRYGVKK-----LLFLGSSCIYPKLAPQPIPENALLTGPLEP--TNEWYAV 151
           I+TNVI +    G+ K     +L   +S +Y    P   P+     G + P      Y  
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD--PLEHPQTESYWGNVNPIGVRSCYDE 178

Query: 152 AKIAGIKMCQAYRIQYNWDAISGMPTNLYGPYDNFHPENSHVLPALMRRFHEAKVQGAKE 211
            K     +   Y  Q+  +       N YGP  N   ++  V+   +     A+    + 
Sbjct: 179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI--DDGRVVSNFI-----AQALRGEP 231

Query: 212 VVVWGTGSPLREFLHVDDLADAVVFLMESYSGLEHVNVGSGKEVTIKELAELMKEVVGFE 271
           + V   G+  R F +V D+ D ++ LME       +N+G+  E T+ ELAE +KE++  E
Sbjct: 232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEG-ENTGPINIGNPGEFTMLELAETVKELINPE 290

Query: 272 GELVWDSSKPDGTPRKLMDSSKLLG-LGWTPKIPLKDGL 309
             +    + PD   ++  D SK    LGW PKI L+DGL
Sbjct: 291 VVIKMVDNTPDDPRQRKPDISKAKELLGWEPKIKLRDGL 329


>GSVIVT01016574001 assembled CDS
          Length = 345

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 18/219 (8%)

Query: 99  IQTNVIDSSYRYGVKK-----LLFLGSSCIYPKLAPQPIPENALLTGPLEP--TNEWYAV 151
           I+TNVI +    G+ K     +L   +S +Y    P   P+     G + P      Y  
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD--PLVHPQEESYWGNVNPIGVRSCYDE 178

Query: 152 AKIAGIKMCQAYRIQYNWDAISGMPTNLYGPYDNFHPENSHVLPALMRRFHEAKVQGAKE 211
            K     +   Y  Q+  +       N YGP  N   ++  V+   +     A+    + 
Sbjct: 179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI--DDGRVVSNFI-----AQAIRGES 231

Query: 212 VVVWGTGSPLREFLHVDDLADAVVFLMESYSGLEHVNVGSGKEVTIKELAELMKEVVGFE 271
           + V   G+  R F +V D+ D +V LME       +N+G+  E T+ ELAE +KE++  +
Sbjct: 232 LTVQAPGTQTRSFCYVSDMVDGLVRLMEG-DNTGPINIGNPGEFTMLELAETVKELINPK 290

Query: 272 GELVWDSSKPDGTPRKLMDSSKLLG-LGWTPKIPLKDGL 309
            E+    + PD   ++  D +K    LGW P + L++GL
Sbjct: 291 VEISMVENTPDDPRQRKPDITKAKELLGWEPNVKLREGL 329


>GSVIVT01019545001 assembled CDS
          Length = 348

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 23/301 (7%)

Query: 33  VRKLQALGFTNLVLRSHAELDLTRQSDVESFFAAEKPEYVILAAAKVGGIHANNTYPADF 92
           V+KL A    NL+     +LDL  +  +E  FA+   + VI  A  +  +  +   P  +
Sbjct: 46  VKKLAAEFGDNLLFH---KLDLRDKPALEQLFASTNFDAVIHFAG-LKAVGESVQKPLLY 101

Query: 93  IAINLQIQTNVIDSSYRYGVKKLLFLGSSCIYPKLAPQPIPENALLTGPLEPTNEWYAVA 152
              NL     +++    +G KKL+F  S+ +Y      P  E      PL  TN  Y   
Sbjct: 102 FDNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEF----PLCATNP-YGRT 156

Query: 153 KIAGIKMCQ-AYRIQYNWDAISGMPTNLYGPY-DNFHPENSHVLPA-LMRRFHEAKVQGA 209
           K+    +C+  +R    W  +     N  G +   +  E+   +P  LM    +  V   
Sbjct: 157 KLFIEDICRDIHRSDSEWKIVLLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRR 216

Query: 210 KEVVVWGT------GSPLREFLHVDDLAD----AVVFLMESYSGLEHVNVGSGKEVTIKE 259
             + V+G+      G+ +R+++HV DLAD    A+  L+ S  G E  N+G+GK  ++ E
Sbjct: 217 PALTVFGSDYSTKDGTGVRDYIHVVDLADGHIAALHKLLNSEIGCEVYNLGTGKGTSVLE 276

Query: 260 LAELMKEVVGFEGELVWDSSKPDGTPRKLMDSSKLLG-LGWTPKIPLKDGLVDTYKWYLE 318
           +    ++  G +  LV D  +P         ++K    L W  K  + +   D + W  +
Sbjct: 277 MVAAFEKASGKKIPLVMDGRRPGDAEIVYASTTKAEKELNWKAKYGISEMCRDQWNWASK 336

Query: 319 N 319
           N
Sbjct: 337 N 337


>GSVIVT01025597001 assembled CDS
          Length = 220

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 8/102 (7%)

Query: 212 VVVWGTGSPLREFLHVDDLADAVVFLMESYSGLEHV---NVGSGKEVTIKELAELMKEVV 268
           + V+G G   R F +V DL D +V LME     EHV   N+G+  E T+ ELAE++KE +
Sbjct: 102 LTVYGDGKQTRSFQYVSDLVDGLVALMEG----EHVGPFNLGNPGEFTMLELAEVVKETI 157

Query: 269 GFEGELVWDSSKPDGTPRKLMDSSKLLG-LGWTPKIPLKDGL 309
                + +  +  D   ++  D S+    L W PKI L++GL
Sbjct: 158 DSSATIEFKPNTADDPHKRKPDISRAKELLNWEPKISLREGL 199


>GSVIVT01019547001 assembled CDS
          Length = 348

 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 127/301 (42%), Gaps = 23/301 (7%)

Query: 33  VRKLQALGFTNLVLRSHAELDLTRQSDVESFFAAEKPEYVILAAAKVGGIHANNTYPADF 92
           V++L A    NLV     +LDL  +  +E  FA+   + VI  A  +  +  +   P  +
Sbjct: 46  VKELAAEFGDNLVFH---KLDLRDKQALEQLFASTNFDAVIHFAG-LKAVGESVQKPLLY 101

Query: 93  IAINLQIQTNVIDSSYRYGVKKLLFLGSSCIYPKLAPQPIPENALLTGPLEPTNEWYAVA 152
              NL     +++    +G KKL+F  S+ +Y    P+ +P       PL   N  Y   
Sbjct: 102 YDNNLIGTITLLEVMAAHGCKKLVFSSSATVYG--WPKEVPCTEEF--PLCAANP-YGRT 156

Query: 153 KIAGIKMCQ-AYRIQYNWDAISGMPTNLYGPYDNFH-PENSHVLPA-LMRRFHEAKVQGA 209
           K+    +C+  Y     W  +     N  G + + H  E+   +P  LM    +  V   
Sbjct: 157 KLVIEDICRDIYGSDSEWKIVLLRYFNPVGAHSSGHIGEDPRGIPNNLMPFVQQVAVGRR 216

Query: 210 KEVVVWGT------GSPLREFLHVDDLAD----AVVFLMESYSGLEHVNVGSGKEVTIKE 259
             + V+G+      G+ +R+++HV DLAD    A+  L  S  G E  N+G+GK  ++ E
Sbjct: 217 PALTVFGSDYSTKDGTGVRDYIHVVDLADGHIAALCKLFNSEIGCEVYNLGTGKGTSVLE 276

Query: 260 LAELMKEVVGFEGELVWDSSKPDGTPRKLMDSSKLLG-LGWTPKIPLKDGLVDTYKWYLE 318
           +    ++  G +  LV    +P         ++K    L W  K  + +   D + W  +
Sbjct: 277 MVAAFEKASGKKIPLVMAGRRPGDAEIVYASTAKAEKELNWKAKYGISEMCRDQWNWASK 336

Query: 319 N 319
           N
Sbjct: 337 N 337


>GSVIVT01028014001 assembled CDS
          Length = 229

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 8/102 (7%)

Query: 212 VVVWGTGSPLREFLHVDDLADAVVFLMESYSGLEHV---NVGSGKEVTIKELAELMKEVV 268
           + V+G G   R F +V DL + ++ LME     EHV   N+G+  E T+ ELA++++E +
Sbjct: 102 LTVYGDGKQTRSFQYVSDLVEGLIRLMEG----EHVGPFNLGNPGEFTMLELAQVVQETI 157

Query: 269 GFEGELVWDSSKPDGTPRKLMDSSKLLG-LGWTPKIPLKDGL 309
               ++ +  +  D   ++  D SK    LGW PK+ L+ GL
Sbjct: 158 DPNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPKVALRKGL 199


>GSVIVT01035142001 assembled CDS
          Length = 345

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 8/110 (7%)

Query: 204 AKVQGAKEVVVWGTGSPLREFLHVDDLADAVVFLMESYSGLEHV---NVGSGKEVTIKEL 260
           A+    + + V+G G   R F +V DL + ++ LME     EHV   N+G+  E T+ EL
Sbjct: 213 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLIRLMEG----EHVGPFNLGNPGEFTMLEL 268

Query: 261 AELMKEVVGFEGELVWDSSKPDGTPRKLMDSSKLLG-LGWTPKIPLKDGL 309
           A++++E +    ++ +  +  D   ++  D SK    LGW P + L++GL
Sbjct: 269 AQVVQETIDPNAKIEFRPNTEDDPHKRKPDISKAKQLLGWEPSVSLRNGL 318


>GSVIVT01036152001 assembled CDS
          Length = 382

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 20/189 (10%)

Query: 140 GPLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYGPYDNFHPE---NSHVLPA 196
           GP+E     YA AK    ++  A   ++        P N  GP  +F P     +  +P 
Sbjct: 171 GPVEKQRWSYACAKQMIERLIYAEGAEHGLKFTIVRPFNWIGPRMDFIPGIDGPTEGVPR 230

Query: 197 LMRRFHEAKVQGAKEVVVWGTGSPLREFLHVDDLADAVVFLMES--YSGLEHVNVGS-GK 253
           ++  F    ++G    +V G G   R F ++ D  +AV+ ++E+   +  +  NVG+   
Sbjct: 231 VLACFSNNLLRGEPLKLVDG-GKSQRTFCYIKDAIEAVLLMIENPERANGQIFNVGNPNN 289

Query: 254 EVTIKELAELMKEV-----VGFEGELVWDSSKPDGTPRKLMDSSKLL--------GLGWT 300
           EVT+++LA+LM EV     VG       D S  D       DS K +         LGW 
Sbjct: 290 EVTMRQLAQLMIEVYGKISVGSSDLTTVDVSSKDFYGVGYDDSDKRIPDMTIINRQLGWN 349

Query: 301 PKIPLKDGL 309
           PK PL+D L
Sbjct: 350 PKTPLQDLL 358


>GSVIVT01019833001 assembled CDS
          Length = 350

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 133/320 (41%), Gaps = 52/320 (16%)

Query: 25  RGLVGSAIVRKLQALGFTNLVLRSHAEL-DLTRQSDVESFFAAEKPEYVI-LAAAKVGGI 82
           R LVG+ + RKL            H  L DL  ++D+E  F+  K + VI  A  K  G 
Sbjct: 50  RDLVGAELSRKL------------HFNLGDLRNKADLEKLFSQTKFDAVIHFAGLKAVGE 97

Query: 83  HANNTYPADFIAINLQIQTNVIDSSYRYGVKKLLFLGSSCIYPKLAPQPIPE--NALLTG 140
              N  P  +   NL    N+ +   +Y  KK++F  S+ +Y +    P  E  N +   
Sbjct: 98  SVVN--PRRYFDNNLIGTINLYEIMAKYNCKKMVFSSSATVYGQPDKIPCVEDFNLMAMN 155

Query: 141 PLEPTNEWYAVAKIAGIKMCQAYRIQYNWDAISGMPTNLYGPYDNFH-PENSHVLPA-LM 198
           P   T  +  + +IA        + + +W  I     N  G +++    E+   +P  LM
Sbjct: 156 PYGRTKLF--LEEIAR----DIQKAEPDWKIILLRYFNPVGAHESGKLGEDPKGIPNNLM 209

Query: 199 RRFHEAKVQGAKEVVVWG------TGSPLREFLHVDDLADA-VVFLMESYS----GLEHV 247
               +  V    E+ V+G       GS +R+++HV DLAD  +  L + ++    G    
Sbjct: 210 PYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDLADGHIAALRKLFTSEDIGCTAY 269

Query: 248 NVGSGKEVTIKELAELMKEVVGFEGELVWDSSKPDGTPRKLMDSSKLLG--------LGW 299
           N+G+G+  ++ E+    ++  G +  +          PR+  D++ +          LGW
Sbjct: 270 NLGTGQGTSVLEMVAAFEKASGKKIPIKL-------CPRRAGDATAVYASTEKAAKELGW 322

Query: 300 TPKIPLKDGLVDTYKWYLEN 319
             K  + +   D +KW   N
Sbjct: 323 KAKYGIAEMCRDQWKWASNN 342