Jatropha Genome Database

JcCA0305581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0305581.10 - phase: 0 
         (585 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01037549001 assembled CDS                                       942   0.0  
GSVIVT01025883001 assembled CDS                                       923   0.0  
GSVIVT01025879001 assembled CDS                                       850   0.0  
GSVIVT01025881001 assembled CDS                                       412   e-115
GSVIVT01025282001 assembled CDS                                       291   4e-79

>GSVIVT01037549001 assembled CDS
          Length = 1219

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/589 (75%), Positives = 514/589 (87%), Gaps = 8/589 (1%)

Query: 1    MENQTALAIPDEDKCIMVYSSIQCPEYGHAVIARCLGVPEHNVRVIARRVGGGFGGKAIK 60
            ME QTALAIPDED CI+VYSSIQCPEY H+ I+RCLG+PEHNVRVI RRVGGGFGGKAI+
Sbjct: 633  METQTALAIPDEDNCIVVYSSIQCPEYAHSTISRCLGIPEHNVRVITRRVGGGFGGKAIR 692

Query: 61   AMPVATACALAAFKLQRPVRMYLSRKTDMIMAGGRHPMKITYNVGFKSNGKITALQLDIL 120
            AMPVATACALAA+KL+RPVR+Y++RKTDMI+AGGRHPMKITY+VGFKS+GKITAL LDIL
Sbjct: 693  AMPVATACALAAYKLRRPVRIYMNRKTDMIIAGGRHPMKITYSVGFKSDGKITALHLDIL 752

Query: 121  VDAGIAPDISPVVPHNIMGALKKYDWGALSFDIKVCKTNLPSRSAMRGPGEVQGSYIAEA 180
            ++AGIA DISP++PHN++GALKKYDWGALSFDIKVCKTN  ++SAMR PGEVQ ++I+EA
Sbjct: 753  INAGIAADISPIMPHNLLGALKKYDWGALSFDIKVCKTNHSTKSAMRAPGEVQATFISEA 812

Query: 181  VIEHVASSLSMDADSVRAINLHAYDSLKLFYDIGAGEPLEYTLISIWDKVATTSSFFQRT 240
            VIEHVAS+LSMD DSVR+ NLH ++SLK FY+  AGEP++YTL SIWDK+A++S   QRT
Sbjct: 813  VIEHVASTLSMDVDSVRSKNLHTFNSLKFFYEGSAGEPVDYTLPSIWDKLASSSRLKQRT 872

Query: 241  EMVKEFNSCNLWRKRGVSRIPIVHEVMLRPTPGKVSILSDGSVAVEVGGIELGQGLWTKV 300
            EM+K+FN CN W+KRG+S++PIVHEV LRPTPGKVSILSDGSVAVEVGGIELGQGLWTKV
Sbjct: 873  EMIKQFNMCNKWQKRGISQVPIVHEVSLRPTPGKVSILSDGSVAVEVGGIELGQGLWTKV 932

Query: 301  KQMVAFALGSIKCAGAGDLFDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRMCCKVLV 360
            KQM AFAL SI+C G GD  +KVRV+QSDTLSLIQ             CEA+R+CC +LV
Sbjct: 933  KQMAAFALSSIQCDGMGDFLEKVRVIQSDTLSLIQGGFTAGSTTSESSCEAIRLCCNILV 992

Query: 361  DRLTPLKDRLQVQMGSIRWETLIRQAYQEAVHLSASSFFVPDSTSMKYLNYGAAVSE--- 417
            +RLTP K+RLQ QMGS+ W TLI QA  +AV+LSASS++VPD +SMKYLNYGAAVSE   
Sbjct: 993  ERLTPTKERLQEQMGSVEWGTLILQAQSQAVNLSASSYYVPDFSSMKYLNYGAAVSEAMS 1052

Query: 418  -VEVDLLTGHTTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVI 476
             VEV+LLTG TTIL+SDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNS+GLV+
Sbjct: 1053 QVEVNLLTGETTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSEGLVV 1112

Query: 477  EEGTWTYKIPTIDTIARQFNVEILNSGHHQKRVLSSKASGEPPLLLAASVHCATRAAIKD 536
             EGTWTYKIPTIDTI +QFNVEILNSGHH KRVLSSKASGEPPLLLA SVHCATRAAI++
Sbjct: 1113 TEGTWTYKIPTIDTIPKQFNVEILNSGHHTKRVLSSKASGEPPLLLAVSVHCATRAAIRE 1172

Query: 537  ARKQLQLWG--CQDGLRSTFDLEVPATMPIVKELCGLDSVEKYLKWKIS 583
            AR+QL  W   C+  L  TF LEVPATMP+VK LCGL++VE YL+  +S
Sbjct: 1173 ARQQLLSWTGLCKSDL--TFQLEVPATMPVVKNLCGLENVESYLQSLLS 1219


>GSVIVT01025883001 assembled CDS
          Length = 771

 Score =  923 bits (2386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/583 (73%), Positives = 504/583 (86%), Gaps = 1/583 (0%)

Query: 1   MENQTALAIPDEDKCIMVYSSIQCPEYGHAVIARCLGVPEHNVRVIARRVGGGFGGKAIK 60
           ME QTALA+PDED CI+VYS+IQCPEY H  IARCLG+PEHNVRVI RRVGGGFGGKAI+
Sbjct: 190 METQTALAVPDEDNCIVVYSAIQCPEYAHGAIARCLGIPEHNVRVITRRVGGGFGGKAIR 249

Query: 61  AMPVATACALAAFKLQRPVRMYLSRKTDMIMAGGRHPMKITYNVGFKSNGKITALQLDIL 120
           AMPVATACALAA+KL RPVR+Y++ KTDMI+AGGRHPMK+TY+VGFKS+GKITAL LDIL
Sbjct: 250 AMPVATACALAAYKLHRPVRIYMNHKTDMIIAGGRHPMKVTYSVGFKSDGKITALHLDIL 309

Query: 121 VDAGIAPDISPVVPHNIMGALKKYDWGALSFDIKVCKTNLPSRSAMRGPGEVQGSYIAEA 180
           ++AGIA D+SPV+P +++GALK YDWGALSFDIK+CKTN  S+SAMR PGE Q  +I+EA
Sbjct: 310 INAGIAVDVSPVMPQHMLGALKNYDWGALSFDIKLCKTNHSSKSAMRAPGEAQAIFISEA 369

Query: 181 VIEHVASSLSMDADSVRAINLHAYDSLKLFYDIGAGEPLEYTLISIWDKVATTSSFFQRT 240
           VIEH+AS+LS+D DSVR  NLH ++SL  F++  AGEP EYTL SIWDK+AT+SSF +RT
Sbjct: 370 VIEHIASTLSVDVDSVRIKNLHTFNSLIFFFEGSAGEPFEYTLPSIWDKLATSSSFKERT 429

Query: 241 EMVKEFNSCNLWRKRGVSRIPIVHEVMLRPTPGKVSILSDGSVAVEVGGIELGQGLWTKV 300
           E +K+FN CN WRKRG+SR+PIVHEV LRPTPGKVSILSDGSVAVEVGGIELGQGLWTKV
Sbjct: 430 EKIKQFNMCNKWRKRGISRVPIVHEVSLRPTPGKVSILSDGSVAVEVGGIELGQGLWTKV 489

Query: 301 KQMVAFALGSIKCAGAGDLFDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRMCCKVLV 360
           KQM AFAL SI+C G GD  +KVRV+QSDTLSLIQ             CEA+R+CC +LV
Sbjct: 490 KQMAAFALSSIQCDGMGDFLEKVRVIQSDTLSLIQGGLTAGSTTSESTCEAIRLCCNMLV 549

Query: 361 DRLTPLKDRLQVQMGSIRWETLIRQAYQEAVHLSASSFFVPDSTSMKYLNYGAAVSEVEV 420
           +RL P+K++LQ QMGS++W TLI QA  +AV+LSASS++VPD +SM+YLNYGAAVSE  +
Sbjct: 550 ERLIPIKEKLQEQMGSVKWSTLILQAQSQAVNLSASSYYVPDFSSMRYLNYGAAVSEA-I 608

Query: 421 DLLTGHTTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVIEEGT 480
           +LLTG TTIL+SDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTN+DGLV+ +GT
Sbjct: 609 NLLTGETTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNADGLVVTKGT 668

Query: 481 WTYKIPTIDTIARQFNVEILNSGHHQKRVLSSKASGEPPLLLAASVHCATRAAIKDARKQ 540
           WTYKIPT+DTI +QFNVEI+NSG H+KRVLSSKASGEPPLLLA SVHCATRAAI++AR+Q
Sbjct: 669 WTYKIPTVDTIPKQFNVEIMNSGQHKKRVLSSKASGEPPLLLAVSVHCATRAAIREARQQ 728

Query: 541 LQLWGCQDGLRSTFDLEVPATMPIVKELCGLDSVEKYLKWKIS 583
           L  W   +   STF LEVPATMP+VK+LCGLD+VE YL+  +S
Sbjct: 729 LLRWTGLNKSDSTFQLEVPATMPVVKKLCGLDNVENYLQSLLS 771


>GSVIVT01025879001 assembled CDS
          Length = 1380

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/544 (74%), Positives = 473/544 (86%)

Query: 1    MENQTALAIPDEDKCIMVYSSIQCPEYGHAVIARCLGVPEHNVRVIARRVGGGFGGKAIK 60
            ME QTALAIPDED CI+VYSSIQCPE  H  I+RCLG+PEHNVRVI RRVGGGFGGK++K
Sbjct: 776  METQTALAIPDEDNCIVVYSSIQCPENAHTTISRCLGIPEHNVRVITRRVGGGFGGKSMK 835

Query: 61   AMPVATACALAAFKLQRPVRMYLSRKTDMIMAGGRHPMKITYNVGFKSNGKITALQLDIL 120
            A+ VATACALAA+KLQRPVR+Y++RKTDM +AGGRHPMK+TY+VGFKSNGKITAL +DIL
Sbjct: 836  AIAVATACALAAYKLQRPVRIYMNRKTDMKIAGGRHPMKVTYSVGFKSNGKITALHVDIL 895

Query: 121  VDAGIAPDISPVVPHNIMGALKKYDWGALSFDIKVCKTNLPSRSAMRGPGEVQGSYIAEA 180
            ++AGI  DISP++P  ++GALKKYDWGA SFDIKVCKTN  S+SAMR PGEVQ ++I+EA
Sbjct: 896  INAGIGVDISPIMPMLMVGALKKYDWGAFSFDIKVCKTNHLSKSAMRAPGEVQATFISEA 955

Query: 181  VIEHVASSLSMDADSVRAINLHAYDSLKLFYDIGAGEPLEYTLISIWDKVATTSSFFQRT 240
            VIEHVAS+LSMD DSVR+ NLH ++SL  F++  AGE +EYTL  IWDK+AT+SSF +RT
Sbjct: 956  VIEHVASTLSMDVDSVRSRNLHTFNSLNFFFEGCAGEHVEYTLPLIWDKLATSSSFKERT 1015

Query: 241  EMVKEFNSCNLWRKRGVSRIPIVHEVMLRPTPGKVSILSDGSVAVEVGGIELGQGLWTKV 300
            +M+K+FN CN W+KRG+SR+PIVHEV L+ TPGKVSILSDGSVAVEVGGIELGQGLWTKV
Sbjct: 1016 DMIKQFNMCNKWQKRGISRVPIVHEVSLKATPGKVSILSDGSVAVEVGGIELGQGLWTKV 1075

Query: 301  KQMVAFALGSIKCAGAGDLFDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRMCCKVLV 360
            KQM AFAL SI C G GD  +KVRV+QSDTLSLIQ             CEA+R+CC +LV
Sbjct: 1076 KQMTAFALISIGCDGMGDFLEKVRVIQSDTLSLIQGGLTAGSTTSECSCEAIRLCCNMLV 1135

Query: 361  DRLTPLKDRLQVQMGSIRWETLIRQAYQEAVHLSASSFFVPDSTSMKYLNYGAAVSEVEV 420
            +RL P+K+RLQ QMGS+ W TLI QA  +AV+LSASS++VPD +S +YLNYGAAVSEVEV
Sbjct: 1136 ERLNPIKERLQEQMGSVEWGTLILQAQSQAVNLSASSYYVPDFSSFQYLNYGAAVSEVEV 1195

Query: 421  DLLTGHTTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVIEEGT 480
            +LLTG TTIL+SDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLV+ EGT
Sbjct: 1196 NLLTGQTTILQSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVVTEGT 1255

Query: 481  WTYKIPTIDTIARQFNVEILNSGHHQKRVLSSKASGEPPLLLAASVHCATRAAIKDARKQ 540
            WTYKIPTIDT+ +QFNVE+LNSGHH+ RVLSSKASGEPPLLLA SVHCATRAAI++AR+Q
Sbjct: 1256 WTYKIPTIDTVPKQFNVEVLNSGHHKNRVLSSKASGEPPLLLAVSVHCATRAAIREARQQ 1315

Query: 541  LQLW 544
            L  W
Sbjct: 1316 LLSW 1319


>GSVIVT01025881001 assembled CDS
          Length = 1096

 Score =  412 bits (1058), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 196/269 (72%), Positives = 224/269 (83%)

Query: 315  GAGDLFDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRMCCKVLVDRLTPLKDRLQVQM 374
            G  D  +KVRV+QSDTLSLIQ             CEA+R+CC +LV RLTP+K+RLQ QM
Sbjct: 828  GCADFLEKVRVIQSDTLSLIQGGLTTASTTSECSCEAIRLCCNMLVKRLTPIKERLQEQM 887

Query: 375  GSIRWETLIRQAYQEAVHLSASSFFVPDSTSMKYLNYGAAVSEVEVDLLTGHTTILRSDI 434
            GS+ W TLI QA  +AV+LSASS++VPD +S +YLNYGAAVSEVEV+LLTG TTIL+SDI
Sbjct: 888  GSVEWGTLILQAQSQAVNLSASSYYVPDFSSFQYLNYGAAVSEVEVNLLTGQTTILQSDI 947

Query: 435  IYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVIEEGTWTYKIPTIDTIARQ 494
            IYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLV+ EGTWTYKIPTIDTI +Q
Sbjct: 948  IYDCGQSLNPAVDLGQIEGAFVQGIGFFMLEEYTTNSDGLVVTEGTWTYKIPTIDTIPKQ 1007

Query: 495  FNVEILNSGHHQKRVLSSKASGEPPLLLAASVHCATRAAIKDARKQLQLWGCQDGLRSTF 554
            FNVE+LNSGHH+ RVLSSKASGEPPLLLA SVHCATRAAI++AR+QL  W       STF
Sbjct: 1008 FNVEVLNSGHHKNRVLSSKASGEPPLLLAVSVHCATRAAIREARQQLLSWTGLTKCDSTF 1067

Query: 555  DLEVPATMPIVKELCGLDSVEKYLKWKIS 583
             LEVPATMP+VKELCGL++VE YL+  +S
Sbjct: 1068 QLEVPATMPVVKELCGLENVESYLQSLLS 1096



 Score =  162 bits (410), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 79/100 (79%), Positives = 91/100 (91%)

Query: 1   MENQTALAIPDEDKCIMVYSSIQCPEYGHAVIARCLGVPEHNVRVIARRVGGGFGGKAIK 60
           ME QTALA+PDED CI+VYSSIQCPE  H  I+RCLG+PEHNVRVI RRVGGGFGGKA+K
Sbjct: 688 METQTALAVPDEDNCIVVYSSIQCPENAHTTISRCLGIPEHNVRVITRRVGGGFGGKAMK 747

Query: 61  AMPVATACALAAFKLQRPVRMYLSRKTDMIMAGGRHPMKI 100
           A+ VATACALAA+KLQRPVR+Y++RKTDM +AGGRHPMK+
Sbjct: 748 AIAVATACALAAYKLQRPVRIYMNRKTDMKIAGGRHPMKV 787



 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 42/54 (77%), Gaps = 1/54 (1%)

Query: 167 RGPGEVQGSYIAEAVIEHVASSLSMDADSVRAINLHAYDSLKLFYDIGAGEPLE 220
           R P +VQ ++I+EAVIEHVAS+LSMD DSVR+ NLH ++SL  F++ G  + LE
Sbjct: 782 RHPMKVQATFISEAVIEHVASTLSMDVDSVRSGNLHTFNSLNFFFE-GCADFLE 834


>GSVIVT01025282001 assembled CDS
          Length = 1301

 Score =  291 bits (746), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 185/591 (31%), Positives = 293/591 (49%), Gaps = 48/591 (8%)

Query: 3    NQTALAIPDEDKCIMVYSSIQCPEYGHAVIARCLGVPEHNVRVIARRVGGGFGGKAIKAM 62
            N + +   D    + + SS QCP+     ++  LG+P   V    +R+GGGFGGK  ++ 
Sbjct: 716  NSSLVWTTDSGNEVHMISSTQCPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSA 775

Query: 63   PVATACALAAFKLQRPVRMYLSRKTDMIMAGGRHPMKITYNVGFKSNGKITALQLDILVD 122
              A    + ++ L RPV++ L R  DM+++G RH     Y VGF ++GK+ AL L+I  +
Sbjct: 776  CFAAVACVPSYLLNRPVKLTLDRDIDMMISGQRHTFLGKYKVGFTNDGKVQALDLEIYNN 835

Query: 123  AGIAPDIS-PVVPHNIMGALKKYDWGALSFDIKVCKTNLPSRSAMRGPGEVQGSYIAEAV 181
             G + D+S  V+   +  +   YD   +  + KVC TN PS +A RG G  QG  I E  
Sbjct: 836  GGNSLDLSGAVLERAMFHSDNVYDIPNVRINGKVCLTNFPSHTAFRGFGGPQGMLITENW 895

Query: 182  IEHVASSLSMDADSVRAINLHAYDSLKLFYDIGAGEPLE-YTLISIWDKVATTSSFFQRT 240
            I+ +A+ L    + +R IN  +   +  +     G+ L+ +TL  +W+++ ++  F +  
Sbjct: 896  IQRIATELKKSPEEIREINFQSEGCVTHY-----GQQLQHFTLPRVWNELKSSCEFLKAR 950

Query: 241  EMVKEFNSCNLWRKRGVSRIPIVHEV-----MLRPTPGKVSILSDGSVAVEVGGIELGQG 295
              V +FN  N W+KRGV+ +P    +      +      V + +DG+V V  GG+E+GQG
Sbjct: 951  GEVDQFNLQNRWKKRGVAMVPTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQG 1010

Query: 296  LWTKVKQMVAFALGSIKCAGAGDLFDKVRVVQSDTLSLIQXXXXXXXXXXXXXCEAVRMC 355
            L TKV Q+ A +               V + ++ T  +                 AV   
Sbjct: 1011 LHTKVAQVAASSFNIP--------LSSVFISETSTDKVPNSTPTAASASSDMYGAAVLDA 1062

Query: 356  CKVLVDRLTPLKDRLQVQMGSIRWETLIRQAYQEAVHLSASSFFV-PD---------STS 405
            C+ +  R+ P+  +         +  L+   Y E + LSA  F++ PD          + 
Sbjct: 1063 CEQIKARMEPIASKRNFS----SFAELVTACYLERIDLSAHGFYITPDIHFDWKTGKGSP 1118

Query: 406  MKYLNYGAAVSEVEVDLLTGHTTILRSDIIYDCGQSLNPAVDLGQIEGAFVQGIGFFMLE 465
              Y  YGA+ +EVE+D LTG      +++  D G S+NPA+D+GQIEGAFVQG+G+  LE
Sbjct: 1119 FSYFTYGASFAEVEIDTLTGDFHTRVANVFLDLGHSINPAIDVGQIEGAFVQGLGWVALE 1178

Query: 466  EYTTNS-------DGLVIEEGTWTYKIPTIDTIARQFNVEILNSGHHQKRVLSSKASGEP 518
            E             G +   G  +YKIP+I+ +  +F+V +L    + K + SSKA GEP
Sbjct: 1179 ELKWGDAAHKWIPPGCLYTCGPGSYKIPSINDVPLKFDVSLLKGAPNPKAIHSSKAVGEP 1238

Query: 519  PLLLAASVHCATRAAIKDARKQLQLWGCQDGLRSTFDLEVPATMPIVKELC 569
            P  LA+SV  A + AI  AR+++       G +  F L+ PAT   V+  C
Sbjct: 1239 PFFLASSVFFAIKDAIVAARREV-------GNKDWFPLDNPATPERVRMAC 1282