Jatropha Genome Database

JcCA0304601.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0304601.20 + phase: 0 /partial
         (194 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01038226001 assembled CDS                                       258   1e-69
GSVIVT01038223001 assembled CDS                                       257   2e-69
GSVIVT01038236001 assembled CDS                                       248   2e-66
GSVIVT01038224001 assembled CDS                                       244   2e-65
GSVIVT01038225001 assembled CDS                                       237   2e-63
GSVIVT01038233001 assembled CDS                                       234   2e-62
GSVIVT01004005001 assembled CDS                                       212   1e-55
GSVIVT01038221001 assembled CDS                                       195   1e-50
GSVIVT01015527001 assembled CDS                                       164   2e-41
GSVIVT01038235001 assembled CDS                                       162   1e-40
GSVIVT01029269001 assembled CDS                                       156   6e-39
GSVIVT01029270001 assembled CDS                                       155   1e-38
GSVIVT01030433001 assembled CDS                                        93   8e-20
GSVIVT01030431001 assembled CDS                                        92   2e-19

>GSVIVT01038226001 assembled CDS
          Length = 312

 Score =  258 bits (658), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/187 (67%), Positives = 151/187 (80%), Gaps = 4/187 (2%)

Query: 1   MASASEEIVSNKQVIFKDYANGYPKESDMFLSTKTIKLEVPEGTNGVLVKNLYLSCDPSM 60
           MA A E  VSNKQVIF+DY +G+PKESDM+++T TI L+VPEG+  V+VKNLYLSCDP M
Sbjct: 1   MADAEE--VSNKQVIFRDYVSGFPKESDMYMTTSTISLKVPEGSKAVVVKNLYLSCDPYM 58

Query: 61  GMRMRTKVEGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLIQMP- 119
             RM    + ++   FKPGSV+ G GVAKV++S HP+F KGDLVWG T WEEY+LI  P 
Sbjct: 59  RPRMSYTTDSYI-HSFKPGSVISGYGVAKVLDSGHPNFSKGDLVWGFTGWEEYTLITAPE 117

Query: 120 FLFKIQHTDVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAK 179
            LFKI + DVPLS+Y GILGM G+TAYAGFYE+ +PKKG+YV+VSAASGAVGQLVGQFAK
Sbjct: 118 SLFKIPNNDVPLSYYIGILGMPGITAYAGFYEICSPKKGEYVYVSAASGAVGQLVGQFAK 177

Query: 180 LSGCYVV 186
           L GCYVV
Sbjct: 178 LIGCYVV 184


>GSVIVT01038223001 assembled CDS
          Length = 342

 Score =  257 bits (657), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 126/179 (70%), Positives = 146/179 (81%), Gaps = 2/179 (1%)

Query: 9   VSNKQVIFKDYANGYPKESDMFLSTKTIKLEVPEGTNGVLVKNLYLSCDPSMGMRMRTKV 68
           VSNKQVIFKDY +G+P ++DM+++T TI L+VPEG+  VLVKNLYLSCDP M  RM    
Sbjct: 4   VSNKQVIFKDYISGFPTDADMYITTSTISLKVPEGSKAVLVKNLYLSCDPYMRPRMTYTT 63

Query: 69  EGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLI-QMPFLFKIQHT 127
           + +V + FKPGSV+EG GVAKV++S HP+F KGDLVWG T WEEYSLI     L KI  T
Sbjct: 64  DSYV-DSFKPGSVIEGYGVAKVLDSGHPNFSKGDLVWGFTNWEEYSLITSTEMLIKIPTT 122

Query: 128 DVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSGCYVV 186
           DVPLS+YTGILGM GLTAYAGFYE+  PKKG+YV+VSAASGAVGQLVGQFAKL GCYVV
Sbjct: 123 DVPLSYYTGILGMPGLTAYAGFYEICTPKKGEYVYVSAASGAVGQLVGQFAKLLGCYVV 181


>GSVIVT01038236001 assembled CDS
          Length = 342

 Score =  248 bits (632), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 116/179 (64%), Positives = 145/179 (81%), Gaps = 1/179 (0%)

Query: 9   VSNKQVIFKDYANGYPKESDMFLSTKTIKLEVPEGTNGVLVKNLYLSCDPSMGMRMRTKV 68
           VSNKQVI++DY  G+PKE+D+ L+T TI L+VPE +NGVLVKNLYLSCDP M + MR   
Sbjct: 3   VSNKQVIYRDYITGFPKETDLVLNTSTISLKVPEESNGVLVKNLYLSCDPYMRILMRKVP 62

Query: 69  EGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLIQMP-FLFKIQHT 127
           +  +   + PGS + G GVA+V++SRHP+FK+GDLVWG T WEEYSLI  P  L KI+HT
Sbjct: 63  DNNLFTCYIPGSPITGFGVARVLDSRHPNFKEGDLVWGTTAWEEYSLITTPETLIKIEHT 122

Query: 128 DVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSGCYVV 186
           DVPLS+YTGIL M G+TAYAGFYE+ +P+KG+ VF+S+A G VGQ+VGQFAKL+GCYVV
Sbjct: 123 DVPLSYYTGILSMPGMTAYAGFYELCSPRKGECVFISSAFGTVGQIVGQFAKLTGCYVV 181


>GSVIVT01038224001 assembled CDS
          Length = 342

 Score =  244 bits (622), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/179 (65%), Positives = 143/179 (79%), Gaps = 2/179 (1%)

Query: 9   VSNKQVIFKDYANGYPKESDMFLSTKTIKLEVPEGTNGVLVKNLYLSCDPSMGMRMRTKV 68
           VSNKQVIFKDY +G+P ++DM+++T T+ L+VPEG+  VLVKNLYLSCDP M  RM    
Sbjct: 4   VSNKQVIFKDYVSGFPTDADMYMTTSTMSLKVPEGSQAVLVKNLYLSCDPYMRARMTYTH 63

Query: 69  EGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLI-QMPFLFKIQHT 127
             ++   FKPGSV+ G GVAKV++S HP+F KGDL+WG T WEEY+L+     LFKI  T
Sbjct: 64  TSYIGS-FKPGSVLNGFGVAKVLDSGHPNFSKGDLIWGFTGWEEYTLMTSTETLFKIPTT 122

Query: 128 DVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSGCYVV 186
           DVPLS+Y GILGM G+TAYAGFYE+  PKKG+YV+VS+ASGAVGQLVGQFAKL GCYVV
Sbjct: 123 DVPLSYYIGILGMPGMTAYAGFYEICTPKKGEYVYVSSASGAVGQLVGQFAKLLGCYVV 181


>GSVIVT01038225001 assembled CDS
          Length = 365

 Score =  237 bits (605), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 117/184 (63%), Positives = 141/184 (76%), Gaps = 3/184 (1%)

Query: 4   ASEEIVSNKQVIFKDYANGYPKESDMFLSTKTIKLEVPEGTNGVLVKNLYLSCDPSMGMR 63
           A  E V N QVIF+ Y +G+P ESD++L+   I L+VPEG+  V+VKNLYLSCDP M +R
Sbjct: 23  ADGEEVGNTQVIFRGYVSGFPNESDLYLANSRISLKVPEGSKAVVVKNLYLSCDPYMRLR 82

Query: 64  MRTKVEGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLIQ-MPFLF 122
           M      F  +PFKPGSV+ G GVAKV++S HP F KGDLVWG+T WEEY+L+     LF
Sbjct: 83  MSCDANYF--QPFKPGSVMTGNGVAKVMDSGHPSFSKGDLVWGITRWEEYTLVTATESLF 140

Query: 123 KIQHTDVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSG 182
           +I  TDVPLS+Y GILG+ GLTAY GFYE+  PKKG+YV+VS+ASGAVGQLVGQFAKL G
Sbjct: 141 EIPDTDVPLSYYIGILGVPGLTAYVGFYELCTPKKGEYVYVSSASGAVGQLVGQFAKLLG 200

Query: 183 CYVV 186
           CYVV
Sbjct: 201 CYVV 204


>GSVIVT01038233001 assembled CDS
          Length = 276

 Score =  234 bits (598), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 121/184 (65%), Positives = 140/184 (76%), Gaps = 2/184 (1%)

Query: 5   SEEIVSNKQVIFKDYANGYPKESDMFLSTKTIKLEVPEG-TNGVLVKNLYLSCDPSMGMR 63
           S E V NKQV+ +DY +GY KESDM ++T TI L+VPEG +  VLVKNLYLSCDP +   
Sbjct: 8   SGEEVRNKQVVLRDYVSGYLKESDMCMATATITLKVPEGNSKAVLVKNLYLSCDPYIRGH 67

Query: 64  MRTKVEGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLIQ-MPFLF 122
            ++   G+  E FKPGS + G GVAKV++S HPDFKK DLVWG T WEEYSLI     LF
Sbjct: 68  TKSIQGGYADEYFKPGSPIVGYGVAKVLDSGHPDFKKDDLVWGFTGWEEYSLITATESLF 127

Query: 123 KIQHTDVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSG 182
           KI HTDVPLS+YTG+L M G+TAY GFYEV APKK +YVFVS+A GAVGQLVGQ AKL G
Sbjct: 128 KIHHTDVPLSYYTGLLSMPGMTAYTGFYEVCAPKKEEYVFVSSAFGAVGQLVGQLAKLLG 187

Query: 183 CYVV 186
           CYVV
Sbjct: 188 CYVV 191


>GSVIVT01004005001 assembled CDS
          Length = 346

 Score =  212 bits (539), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/181 (60%), Positives = 136/181 (75%), Gaps = 4/181 (2%)

Query: 9   VSNKQVIFKDYANGYPKESDMFLST-KTIKLEVPEGTNGVLVKNLYLSCDPSMGMRMRTK 67
           V NKQ+I K+Y +  PKE+D+ L     IKL+VP+G+   LVKNLYLSCDP M  RMR  
Sbjct: 6   VGNKQIILKNYTDQIPKETDLELRHGNKIKLKVPKGSGAFLVKNLYLSCDPYMRGRMRDF 65

Query: 68  VEGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLI-QMPFLFKIQH 126
            + + + PF PGSV+EG GV++VV+S +P+FK GDL+ G+T WEEYSLI +   L KIQH
Sbjct: 66  HDSY-LPPFTPGSVIEGFGVSRVVDSDNPNFKPGDLIAGVTGWEEYSLIYRTQQLRKIQH 124

Query: 127 TD-VPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSGCYV 185
            D +PLS + G+LGM G TAYAGFYEV +P+KG+ V VSAASGAVGQLVGQ AKL GCYV
Sbjct: 125 QDDIPLSFHVGLLGMPGFTAYAGFYEVCSPQKGETVLVSAASGAVGQLVGQLAKLHGCYV 184

Query: 186 V 186
           V
Sbjct: 185 V 185


>GSVIVT01038221001 assembled CDS
          Length = 232

 Score =  195 bits (495), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 94/128 (73%), Positives = 110/128 (85%), Gaps = 2/128 (1%)

Query: 60  MGMRMRTKVEGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLIQMP 119
           M  RMR  ++G  +EPFKPGS + G GVAKV++SRHPDF+ GDLVWG+T WEEYSLI   
Sbjct: 1   MRSRMRN-IQGSYVEPFKPGSPITGYGVAKVLDSRHPDFRTGDLVWGITGWEEYSLITTD 59

Query: 120 -FLFKIQHTDVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFA 178
             LFKIQHTDVPLS+YTGILGM+G+TAY+GFYE+ +PKKG+YVF+SAASGAVGQLVGQFA
Sbjct: 60  ERLFKIQHTDVPLSYYTGILGMAGMTAYSGFYEICSPKKGEYVFISAASGAVGQLVGQFA 119

Query: 179 KLSGCYVV 186
           KL GCYVV
Sbjct: 120 KLLGCYVV 127


>GSVIVT01015527001 assembled CDS
          Length = 346

 Score =  164 bits (415), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/184 (48%), Positives = 121/184 (65%), Gaps = 7/184 (3%)

Query: 9   VSNKQVIFKDYANGYPKESDMFLSTKTIKLEVPEGTNGVLVKNLYLSCDPSMGMRMRT-- 66
           V NK V  K + +G P++SD  L T  ++L    G+N V+VKNLY+S DP    RM++  
Sbjct: 3   VINKYVTIKTHVDGAPQDSDFELKTAALRLWAEPGSNDVIVKNLYVSIDPYQLNRMKSYS 62

Query: 67  ---KVEGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLIQM-PFLF 122
              +   F + P  PG  ++  GV +VV S HP+F++ DLV GL +W EYS+++    L 
Sbjct: 63  SSHRTINFAV-PISPGMDIDAYGVGRVVASGHPEFEEDDLVVGLISWGEYSVVKGGNMLR 121

Query: 123 KIQHTDVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSG 182
           K+     PLS++ GILG SGLTA+ GF++V  PKKG+ VFVSAASG+VG LVGQ+AKL G
Sbjct: 122 KLDPMGFPLSNHVGILGFSGLTAHGGFFQVCKPKKGEKVFVSAASGSVGNLVGQYAKLFG 181

Query: 183 CYVV 186
           CYVV
Sbjct: 182 CYVV 185


>GSVIVT01038235001 assembled CDS
          Length = 279

 Score =  162 bits (410), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 77/112 (68%), Positives = 93/112 (83%), Gaps = 1/112 (0%)

Query: 76  FKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLIQMPFL-FKIQHTDVPLSHY 134
            KPGS + G GVA+V++S  P+F++G+L+WG T WEEYSLI    + FKIQHTDVPLS+Y
Sbjct: 8   LKPGSAITGYGVARVLDSGDPNFREGELIWGTTGWEEYSLITTSSIRFKIQHTDVPLSNY 67

Query: 135 TGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSGCYVV 186
           TGI GM G+TAYA FYE+ +PKKG++V VSAASGAVGQLVGQFAKL GCYVV
Sbjct: 68  TGIFGMPGITAYARFYEICSPKKGEHVSVSAASGAVGQLVGQFAKLMGCYVV 119


>GSVIVT01029269001 assembled CDS
          Length = 359

 Score =  156 bits (394), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 87/184 (47%), Positives = 116/184 (63%), Gaps = 6/184 (3%)

Query: 9   VSNKQVIFKDYANGY-PKESDMFLSTKTIKLEVPEGTNGVLVKNLYLSCDPSMGMRMRTK 67
           V+NK V  K + +G  P+ESD  L T  + L V  G+  V+VKNLY+S DP    RM+  
Sbjct: 3   VTNKYVTVKTHIDGSSPQESDFELKTAALNLSVEPGSKDVIVKNLYVSIDPYQINRMKRV 62

Query: 68  VEG----FVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLIQM-PFLF 122
                     +   PG  +   G+ +VV S +P+F+K DLV GL  WEEY++++    L 
Sbjct: 63  CSSQKLVSTADGITPGQAISAHGLGRVVASGNPEFEKDDLVVGLINWEEYTIVKGGNILR 122

Query: 123 KIQHTDVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSG 182
           K+     PLS++ G+LG+SGLTAYAGF EV  PKKG+ VFVSAA G+VG LVGQ+AKL G
Sbjct: 123 KLDPMGFPLSYHLGVLGLSGLTAYAGFVEVCKPKKGEKVFVSAACGSVGNLVGQYAKLFG 182

Query: 183 CYVV 186
           C+VV
Sbjct: 183 CHVV 186


>GSVIVT01029270001 assembled CDS
          Length = 347

 Score =  155 bits (391), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 6/184 (3%)

Query: 9   VSNKQVIFKDYANGY-PKESDMFLSTKTIKLEVPEGTNGVLVKNLYLSCDPSMGMRMRTK 67
           V+NK V  K + +G  P+ESD  L T  + L V  G+  V+VKNLY+S DP    RM+  
Sbjct: 3   VTNKYVTVKTHIDGSSPQESDFELKTAALHLSVEPGSKDVIVKNLYVSIDPYQINRMKRV 62

Query: 68  VEG----FVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWGLTTWEEYSLIQMPFLF- 122
                     +   PG  +   G+ +V+ S +P+F+K DLV GL  WEEY++++    F 
Sbjct: 63  CSSQKLVSTADGITPGQAISANGIGRVMASGNPEFEKDDLVVGLINWEEYTIVKGGNTFR 122

Query: 123 KIQHTDVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSG 182
           K+     PLS++ G+LG+SGLTAY GF+EV  PKKG+ VFVSAA G+VG LVGQ+AKL G
Sbjct: 123 KLDPMGFPLSYHLGVLGLSGLTAYGGFFEVCKPKKGEKVFVSAACGSVGNLVGQYAKLFG 182

Query: 183 CYVV 186
           C+VV
Sbjct: 183 CHVV 186


>GSVIVT01030433001 assembled CDS
          Length = 361

 Score = 92.8 bits (229), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 7/172 (4%)

Query: 20  ANGYPKESDMFLSTKTIKLE---VPEGTNGVLVKNLYLSCDPSMGMRMRTKVEGFVMEPF 76
           A G P    + L T  + L+   +P+  + V V+ L++S DP +  RM  + EG     F
Sbjct: 30  AKGIPTSDHLKLRTTKLSLDADSIPK--DHVAVELLWVSVDPYLRGRMSGQDEGLYFSQF 87

Query: 77  KPGSVVEGLGVAKVVESRHPDFKKGDLV-WGLTTWEEYSLIQMPFLFKIQHT-DVPLSHY 134
               V+   G+ +V+ S+   F KGDLV      + EY +I+   L  +  T  + +S Y
Sbjct: 88  ALDEVITTCGIGRVIRSKSSKFSKGDLVSTSFFPFSEYFIIEATSLQVVDQTAGIEISTY 147

Query: 135 TGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLSGCYVV 186
              LG+ G  A+     +G PK G  VF+SAA+G VG   GQ AK  GC VV
Sbjct: 148 LSALGVPGFAAWVAIEVIGNPKSGSNVFISAAAGGVGMFAGQLAKFKGCRVV 199


>GSVIVT01030431001 assembled CDS
          Length = 361

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 8   IVSNKQVIFKDYA-NGYPKESDMFLSTKTIKLE---VPEGTNGVLVKNLYLSCDPSMGMR 63
           +V +++ +   YA  G P    + L T  + L+   +P+G   V V+ L++S DP +  R
Sbjct: 17  VVESREWVMSAYAAEGVPTSDHLKLRTTKLSLDANSIPDGH--VAVELLWISVDPYLRTR 74

Query: 64  MRTKVEGFVMEPFKPGSVVEGLGVAKVVESRHPDFKKGDLVWG-LTTWEEYSLIQMPFLF 122
           M    +G     F    V+   GV +V  S++  F  GD+V      + EY +    FL 
Sbjct: 75  MTGHDDGLYFSQFALNEVITAFGVGRVFLSKNGKFSTGDIVINPFFPFAEYCIAPPTFLR 134

Query: 123 KIQHT-DVPLSHYTGILGMSGLTAYAGFYEVGAPKKGDYVFVSAASGAVGQLVGQFAKLS 181
            I  T  + L  Y   LG+ G  A+ G   +G PK G  VF+SAA+G VG   GQ AKL 
Sbjct: 135 VIDPTAGIELPAYLSSLGVPGFAAWVGIEVLGNPKPGSNVFISAAAGGVGIFAGQLAKLK 194

Query: 182 GCYVV 186
           GC VV
Sbjct: 195 GCRVV 199