Jatropha Genome Database

JcCA0297521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0297521.10 + phase: 0 /partial
         (342 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01036862001 assembled CDS                                       320   9e-88
GSVIVT01024318001 assembled CDS                                       271   4e-73
GSVIVT01032103001 assembled CDS                                       157   5e-39
GSVIVT01032110001 assembled CDS                                       156   1e-38
GSVIVT01029057001 assembled CDS                                       144   4e-35
GSVIVT01038080001 assembled CDS                                       134   5e-32
GSVIVT01021507001 assembled CDS                                       102   4e-22
GSVIVT01035636001 assembled CDS                                        73   2e-13
GSVIVT01035633001 assembled CDS                                        58   6e-09

>GSVIVT01036862001 assembled CDS
          Length = 915

 Score =  320 bits (819), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 175/323 (54%), Positives = 208/323 (64%), Gaps = 45/323 (13%)

Query: 26  KGNQMDAFSSSFLS-TVPPSKLFLT---HKTTPTSFPLP-LLNVSSVR-IEEKPQXXXXX 79
           +G +M+     FLS T+P  K  ++     T P+S P P  L++S++R +E+K       
Sbjct: 28  EGKEMNPLFCPFLSSTLPHPKPLVSPSLTTTRPSSSPYPPFLHISAIRNVEDK------- 80

Query: 80  XXXXXXXXXXXXXXXXXXINISAATAKRRVEPSLPTMVFNAFDGIINNFIDPPLKPGVDP 139
                             I  +  TAK+R  PSL   +FN  D  INNFI PPL P +DP
Sbjct: 81  --LHSTFYATPTTSQFPEIPTTVITAKKRPVPSLLVTIFNGLDDFINNFIGPPLPPSIDP 138

Query: 140 GHVLSDNFAPVDELPPTDCEVIEGSLPSCLDGAYIRNGPNPQYLPKGPYHLFDGDGMLHS 199
            HVLS NFAPVDELPPT+CEVIEGSLP CLDGAYIRNGPNPQ+ P+GP+HLFDGDGMLHS
Sbjct: 139 KHVLSGNFAPVDELPPTECEVIEGSLPPCLDGAYIRNGPNPQFYPRGPHHLFDGDGMLHS 198

Query: 200 IRISQGKAKLCSRYVKTYKYIKERDAGAPLLPNVFSGFNXXXXXXXXXXXXXXXILSGQF 259
           IRIS G+   CSRYVKTYKYI E+ AG+P                              F
Sbjct: 199 IRISHGRPIFCSRYVKTYKYIIEKRAGSP------------------------------F 228

Query: 260 NPANGIGLANTSLAFFGNRLYALGESDLPYVVRLTPNGDIETVGRHDFDGKLFFSMTAHP 319
           +P NG+GLANTS+AFF   LYAL ESDLPY VRLTP+GDI+T+GR+DFDGKL  SMTAHP
Sbjct: 229 DPVNGVGLANTSVAFFCGHLYALAESDLPYAVRLTPDGDIKTLGRYDFDGKLSMSMTAHP 288

Query: 320 KIDLETGETFAFRYAPIPPFLTY 342
           KID  TGE FAFRY+P+ PFLTY
Sbjct: 289 KIDPSTGEAFAFRYSPVRPFLTY 311



 Score =  259 bits (661), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 169/360 (46%), Positives = 193/360 (53%), Gaps = 101/360 (28%)

Query: 2   VGSHRP---RVAFKSCVKSLYXXXXXEKGNQMDAFSSSF---------LSTVPPSKLFLT 49
           V SHRP   +V F S  +         + N+MDAFSSSF         L+T PP      
Sbjct: 447 VSSHRPGSSQVKFASLKRI--------QPNKMDAFSSSFLSSTFTFPSLTTRPP------ 492

Query: 50  HKTTPTSFP-LPLLNVSSVRIEEKPQXXXXXXXXXXXXXXXXXXXXXXXINISAATAKRR 108
               P+S P +P LN+S+VRIEEK Q                           AA   R 
Sbjct: 493 --IAPSSLPQIPSLNISAVRIEEK-QPQSLTAETSSQSSKTQVHKPPPPPPRRAALPTRN 549

Query: 109 V------EPSLPTMVFNAFDGIINNFIDPPLKPGVDPGHVLSDNFAPVDELPPTDCEVIE 162
           +      EPSLP  +FNA D +INNFIDPPL+  VDP +VLS NFAPV+ELPPT+CEV +
Sbjct: 550 IPKKGAAEPSLPVTIFNALDDVINNFIDPPLRSSVDPRYVLSQNFAPVEELPPTECEVTD 609

Query: 163 GSLPSCLDGAYIRNGPNPQYLPKGPYHLFDGDGMLHSIRISQGKAKLCSRYVKTYKYIKE 222
           GSLP  LDGAYIRNGPNPQ+LP+GPYHLFDGDGMLHSIRISQG+A LCSRYVKTYKY  E
Sbjct: 610 GSLPPWLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHSIRISQGRAILCSRYVKTYKYTIE 669

Query: 223 RDAGAPLLPNVFSGFNXXXXXXXXXXXXXXXILSGQFNPANGIGLANTSLAFFGNRLYAL 282
           R AG+P+LPN                          FNP                    L
Sbjct: 670 RRAGSPILPN--------------------------FNP-------------------TL 684

Query: 283 GESDLPYVVRLTPNGDIETVGRHDFDGKLFFSMTAHPKIDLETGETFAFRYAPIPPFLTY 342
           G  D                    FDGKL  SMTAHPK+D ETGE FAFRY P+PPFLTY
Sbjct: 685 GRHD--------------------FDGKLVMSMTAHPKVDPETGEAFAFRYGPVPPFLTY 724


>GSVIVT01024318001 assembled CDS
          Length = 562

 Score =  271 bits (692), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 130/215 (60%), Positives = 154/215 (71%), Gaps = 25/215 (11%)

Query: 128 FIDPPLKPGVDPGHVLSDNFAPVDELPPTDCEVIEGSLPSCLDGAYIRNGPNPQYLPKGP 187
           FI+PPL P VDP HVL+ NFA VDELPP DC V+EG LP  L+G YIRNGPNP + P+GP
Sbjct: 98  FINPPLHPSVDPKHVLTGNFAQVDELPPIDCLVVEGELPQSLNGTYIRNGPNPLHQPRGP 157

Query: 188 YHLFDGDGMLHSIRISQGKAKLCSRYVKTYKYIKERDAGAPLLPNVFSGFNXXXXXXXXX 247
           +HLF+GDGMLHSIR+S G+A  CSRYVKTYKY  E + G P+ PN+ SGF          
Sbjct: 158 HHLFEGDGMLHSIRLSDGRATFCSRYVKTYKYALEDNVGFPIFPNILSGF---------- 207

Query: 248 XXXXXXILSGQFNPANGIGLANTSLAFFGNRLYALGESDLPYVVRLTPNGDIETVGRHDF 307
                          +  GLANTSL+ F NRL+ALGESDLPY + L+  GDIET+GR DF
Sbjct: 208 ---------------HSFGLANTSLSLFSNRLFALGESDLPYSIHLSEEGDIETIGRCDF 252

Query: 308 DGKLFFSMTAHPKIDLETGETFAFRYAPIPPFLTY 342
           DGK F +MTAHPKID ETGETFAFR +PIPP++T+
Sbjct: 253 DGKAFINMTAHPKIDPETGETFAFRCSPIPPYITF 287


>GSVIVT01032103001 assembled CDS
          Length = 546

 Score =  157 bits (398), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 85/207 (41%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 139 PGHVLSDNFAPV-DELPPTDCEVIEGSLPSCLDGAYIRNGPNPQYLPKGPYHLFDGDGML 197
           P H LS NFAPV DE PP     + G LP CL+G ++R GPNP++ P   YH FDGDGM+
Sbjct: 49  PLHYLSGNFAPVRDETPPCKNLPVIGYLPECLNGEFVRVGPNPKFSPVAGYHWFDGDGMI 108

Query: 198 HSIRISQGKAKLCSRYVKTYKYIKERDAGAPLLPNV--FSGFNXXXXXXXXXXXXXXXIL 255
           H + I  GKA   SRYV+T +  +E   G      +    G                 IL
Sbjct: 109 HGLHIKDGKATYVSRYVRTSRLKQEEYFGGAKFMRIGDLKGLFGLLMVNMQMLRAKLKIL 168

Query: 256 SGQFNPANGIGLANTSLAFFGNRLYALGESDLPYVVRLTPNGDIETVGRHDFDGKLFFSM 315
              +    G G  NT+L +   +L AL E+D PYV+++  +GD++T+G  D+D +L  S 
Sbjct: 169 DVSY----GTGTGNTALVYHHGKLLALSEADKPYVLKVLEDGDLQTLGMLDYDKRLTHSF 224

Query: 316 TAHPKIDLETGETFAFRYAPIPPFLTY 342
           TAHPK+D  TGE F+F Y+  PP++TY
Sbjct: 225 TAHPKVDPFTGEMFSFGYSHTPPYITY 251


>GSVIVT01032110001 assembled CDS
          Length = 483

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/207 (41%), Positives = 114/207 (55%), Gaps = 7/207 (3%)

Query: 139 PGHVLSDNFAPV-DELPPTDCEVIEGSLPSCLDGAYIRNGPNPQYLPKGPYHLFDGDGML 197
           P H LS NFAPV DE PP     + G LP CL+G ++R GPNP++ P   YH FDGDGM+
Sbjct: 7   PLHYLSGNFAPVRDETPPCKNLPVIGYLPECLNGEFVRVGPNPKFSPVAGYHWFDGDGMI 66

Query: 198 HSIRISQGKAKLCSRYVKTYKYIKERDAGAPLLPNV--FSGFNXXXXXXXXXXXXXXXIL 255
           H +RI  GKA   SRYV+T +  +E   G           G                 IL
Sbjct: 67  HGLRIKDGKATYVSRYVRTSRLKQEEYFGGAKFTRFGDLKGLFGLLMVNMQMLRAKLKIL 126

Query: 256 SGQFNPANGIGLANTSLAFFGNRLYALGESDLPYVVRLTPNGDIETVGRHDFDGKLFFSM 315
              +    G G  NT+L +   +L AL E D PYV+++  +GD++T+G  D+D +L  S 
Sbjct: 127 DVSY----GTGTGNTALVYHHGKLLALSEVDKPYVLKVLEDGDLQTLGLLDYDKRLTHSF 182

Query: 316 TAHPKIDLETGETFAFRYAPIPPFLTY 342
           TAHPK+D  TGE F F Y+  PP++TY
Sbjct: 183 TAHPKVDPFTGEMFTFGYSHTPPYITY 209


>GSVIVT01029057001 assembled CDS
          Length = 554

 Score =  144 bits (364), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 109/208 (52%), Gaps = 24/208 (11%)

Query: 137 VDPGHVLSDNFAPVDELPPTDCEVIEGSLPSCLDGAYIRNGPNPQYLPKGPYHLFDGDGM 196
           +DP   L  NFAPV E P      + G LP  L G Y+RNG NP   P G +HLFDGDGM
Sbjct: 92  LDPAVQLVGNFAPVRECPVQHDLQVLGQLPPALRGVYLRNGANPMLSPAGGHHLFDGDGM 151

Query: 197 LHSIRISQG-KAKLCSRYVKTYKYIKERDAGAPLLPNVFSGFNXXXXXXXXXXXXXXXIL 255
           +H++ +  G +A    R+ +T + ++E   G PL P                        
Sbjct: 152 IHAVTLGPGNRASYSCRFTRTSRLVQEAALGRPLFPKPI--------------------- 190

Query: 256 SGQFNPANGIGLANTSLAFFGNRLYALGESDLPYVVRLTPNGDIETVGRHDFDGKLFFSM 315
            G  + + G G+AN  L +F  RL A+ E DLPY V++  +GD+ET GR DF G++   M
Sbjct: 191 -GLVDGSRGTGVANAGLVYFNGRLLAMSEDDLPYHVKIKGDGDLETTGRFDFSGQMDRPM 249

Query: 316 TAHPKIDLETGETFAFRYAPI-PPFLTY 342
            AHPK+D  TGE F+  Y  +  P+L Y
Sbjct: 250 IAHPKVDPITGELFSLSYNVVKKPYLKY 277


>GSVIVT01038080001 assembled CDS
          Length = 474

 Score =  134 bits (338), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 107/223 (47%), Gaps = 55/223 (24%)

Query: 112 SLPTMVFNAFD-GIINNFIDPPLKPGVDPGHVLSDNFAPVDELPPTDCEVIEGSLPSCLD 170
           S   M  +A +  ++      PL    DP   ++ NFAPV E P      ++G +P C+ 
Sbjct: 69  SAAAMALDAVETALVARETQHPLPKTADPRVQIAGNFAPVPEQPVHHSLPVDGRIPDCIQ 128

Query: 171 GAYIRNGPNPQYLPKGPYHLFDGDGMLHSIRISQGKAKLCSRYVKTYKYIKERDAGAPLL 230
           G Y RNG NP + P   +HLFDGDGM                     + I+ERD G P+ 
Sbjct: 129 GVYTRNGANPLHKPVAGHHLFDGDGM---------------------RLIQERDFGRPV- 166

Query: 231 PNVFSGFNXXXXXXXXXXXXXXXILSGQFNPANGIGLANTSLAFFGNRLYALGESDLPYV 290
                                           +G G+AN  L +F  RL A+ E DLPY 
Sbjct: 167 --------------------------------HGTGVANAGLVYFNRRLLAMSEDDLPYQ 194

Query: 291 VRLTPNGDIETVGRHDFDGKLFFSMTAHPKIDLETGETFAFRY 333
           +R+TP+GD+ETVGR+DF+G+L  +M AHPK+D  +GE FA  Y
Sbjct: 195 IRVTPSGDLETVGRYDFEGQLRSTMIAHPKVDPVSGEMFALSY 237


>GSVIVT01021507001 assembled CDS
          Length = 473

 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 99/226 (43%), Gaps = 61/226 (26%)

Query: 120 AFDGIINNFIDPPLKPGVDPGHVLSDNFAPVDELPPTDCEVIEGSLPSCLDGAYIRNGPN 179
           A   ++++    PL    DP   ++ NFAPV E P      + G++P C++G Y+RNG N
Sbjct: 106 AESALVSHERQHPLPKTADPRVQIAGNFAPVPEQPVCHSLPVSGTIPDCINGVYLRNGAN 165

Query: 180 PQYLPKGPYHLFDGDGMLHSIRISQGKAKLCSRYVKTYKYIKERDAGAPLLPNVFSGFNX 239
           P + P   +H FDGDGM                         ER  G P+ P        
Sbjct: 166 PLFEPVAGHHFFDGDGM-------------------------ERKLGRPVFPKAI----- 195

Query: 240 XXXXXXXXXXXXXXILSGQFNPANGIG--LANTSLAFFGNRLYALGESDLPYVVRLTPNG 297
                            G+ +  +GI   L   +   FG RL A+ E DLPY VR+ P+G
Sbjct: 196 -----------------GELHGHSGIARLLLFYARGLFGLRLLAMSEDDLPYQVRIKPSG 238

Query: 298 DIETVGRHDFDGKLFFS------------MTAHPKIDLETGETFAF 331
           D+ETVGR+DFD +L  S             TA   I +E+ +TF F
Sbjct: 239 DLETVGRYDFDKQLRGSQKSRFGILAKNAQTASDIIWVESPDTFCF 284


>GSVIVT01035636001 assembled CDS
          Length = 567

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 36/242 (14%)

Query: 117 VFNAFDGIINNFIDPPLKPGVDPGHVLSDNFAPVDELPPTDCEVI--EGSLPSCL-DGAY 173
           + +AF   +  F+D PL P          NFAPV+E+   D EVI  EG++P+   +G Y
Sbjct: 24  ILDAFVDSVFQFVDQPLLPS-------QKNFAPVEEIGE-DVEVICNEGNVPADFPEGIY 75

Query: 174 IRNGPNPQY---------LPKGPYHLFDGDGMLHSI---RISQGKAKLC--SRYVKTYKY 219
           IRNGPNP +           +  +   +G+GMLH++   + + G   +   +RYV++  +
Sbjct: 76  IRNGPNPLFGGLKSTVSVFGRTSHIWIEGEGMLHALYFMKNAHGDWSISYKNRYVESETF 135

Query: 220 IKERDAGAPLLPNVFSGFNXXXXXXXXXXXXXXXILSGQFNPANGIGLANTSLAFFGNRL 279
             E+    P       G +               ++S Q        ++NTS+     + 
Sbjct: 136 KIEKQGNKPAFVPTIEGDSPAILAAALLNMLRFGMVSKQ--------ISNTSIFEHSGKF 187

Query: 280 YALGESDLPYVVRLTPNGDIETVGRHDFDGKLFFSMTAHPKIDLETGETFAFRYAPIPPF 339
           YA  E+ LP  + +     +ET  + D +G    + T+HPK D   GE        + PF
Sbjct: 188 YASAENHLPQEIDIFT---LETFDKGDVNGAWDRAFTSHPKKDPRNGELVIMGIDAVKPF 244

Query: 340 LT 341
             
Sbjct: 245 FV 246


>GSVIVT01035633001 assembled CDS
          Length = 1054

 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 29/259 (11%)

Query: 100 ISAATAKRRVEPSLPTMVFNAFDGIINNFIDPPLKPGVDPGHVLSDNFAPVDEL-PPTDC 158
           +S+A  K  V   +   + N  + +++ F+D   +    P      NFAPV+E+      
Sbjct: 487 LSSAVKKISVRTDIAKTLKNTSNRMLDAFVDSTFQFVSQPLLPSQKNFAPVEEIGEAVQV 546

Query: 159 EVIEGSLPSCLD-GAYIRNGPNPQY---------LPKGPYHLFDGDGMLHSI---RISQG 205
             IEG +P     G YIRNG NP +           +  +   +G+GMLH+I   + + G
Sbjct: 547 VCIEGIIPVDFRAGVYIRNGSNPLFGGLKYTISIFGRSSHIWVEGEGMLHAIYFMKDAHG 606

Query: 206 KAKLC--SRYVKTYKYIKERDAGAP-LLPNVFSGFNXXXXXXXXXXXXXXXILSGQFNPA 262
              +   +RYV++  +  E+    P  LP V  G +               +++ Q    
Sbjct: 607 DWIISYKNRYVESETFKLEKQRNKPSFLPTV-EGDSPAIIAAYLLNMLRFGMVNKQ---- 661

Query: 263 NGIGLANTSLAFFGNRLYALGESDLPYVVRLTPNGDIETVGRHDFDGKLFFSMTAHPKID 322
               +++TS+     + YA+ E+ LP  + +     +ET+   D +G      T+HPK  
Sbjct: 662 ----ISSTSIFEHSRKFYAITENHLPQEIDIFT---LETLEEWDVNGAWDRPFTSHPKKA 714

Query: 323 LETGETFAFRYAPIPPFLT 341
             TGE          PF+ 
Sbjct: 715 PGTGELVTIGMDGQKPFIV 733