Jatropha Genome Database

JcCA0292971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0292971.10 - phase: 2 /pseudo/partial
         (242 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01016901001 assembled CDS                                       377   e-105
GSVIVT01015256001 assembled CDS                                       366   e-102
GSVIVT01020159001 assembled CDS                                       307   3e-84
GSVIVT01008852001 assembled CDS                                       294   3e-80
GSVIVT01033907001 assembled CDS                                       262   1e-70
GSVIVT01033909001 assembled CDS                                       234   3e-62
GSVIVT01038665001 assembled CDS                                       221   3e-58
GSVIVT01038664001 assembled CDS                                       113   8e-26

>GSVIVT01016901001 assembled CDS
          Length = 441

 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/234 (80%), Positives = 208/234 (88%), Gaps = 2/234 (0%)

Query: 1   YKYPVAXXXXXXXXXXXEPPFVAIRADMDALALEEAVEWEHKSKVPGKMHACGHDAHVAM 60
           YKYPVA           EPPFVAIRADMDALA++E VEWEHKSK+PGKMHACGHD+HVAM
Sbjct: 83  YKYPVAVTGVLGFVGTGEPPFVAIRADMDALAMQEMVEWEHKSKIPGKMHACGHDSHVAM 142

Query: 61  LLGAAKILQDHRNELKGTVVLVFQPAEEGHGGAKRMLDSGVLENIDAIFGLHVSFLHPIG 120
           LLGAAKILQ+HR EL+GTV+LVFQPAEEG GGAK++LD+GVLEN++AIFGLHVS   PIG
Sbjct: 143 LLGAAKILQEHREELQGTVILVFQPAEEGGGGAKKILDAGVLENVNAIFGLHVSPDLPIG 202

Query: 121 TVGSRAGPLLAGSGFFEAVISGKGGHAAIPQHSIDPIIAASNVIVSLQHLVSREADPLDS 180
            V SR+GPLLAGSGFFEAVISGKGGHAAIPQHSIDPI+AASNVIVSLQHLVSREADPL+S
Sbjct: 203 EVASRSGPLLAGSGFFEAVISGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLES 262

Query: 181 QVVTIAKFQGGEAFNVIPDSVTIGGTFRAFSKESFIQLKQRIEETGISTRIQAI 234
           QVVT+AKFQGG AFNVIPDSVTIGGTFRAFSKES +QLKQRIEE  + TR  A+
Sbjct: 263 QVVTVAKFQGGGAFNVIPDSVTIGGTFRAFSKESIMQLKQRIEE--VITRQAAV 314


>GSVIVT01015256001 assembled CDS
          Length = 406

 Score =  366 bits (940), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 178/224 (79%), Positives = 200/224 (89%)

Query: 1   YKYPVAXXXXXXXXXXXEPPFVAIRADMDALALEEAVEWEHKSKVPGKMHACGHDAHVAM 60
           Y++PVA           EPPFVAIRADMDAL ++E VEWEHKSK+PGKMHACGHDAHVAM
Sbjct: 36  YRFPVAVTGVVGFIGTGEPPFVAIRADMDALPMQEGVEWEHKSKIPGKMHACGHDAHVAM 95

Query: 61  LLGAAKILQDHRNELKGTVVLVFQPAEEGHGGAKRMLDSGVLENIDAIFGLHVSFLHPIG 120
           LLGAAK+LQ HR++L+GTVVLVFQPAEE  GGAK+ML++G+LENIDAIFGLHVS   PIG
Sbjct: 96  LLGAAKMLQKHRHDLQGTVVLVFQPAEERDGGAKKMLETGILENIDAIFGLHVSPRVPIG 155

Query: 121 TVGSRAGPLLAGSGFFEAVISGKGGHAAIPQHSIDPIIAASNVIVSLQHLVSREADPLDS 180
           +V SR+GP+LA  GFF+AVISGKGGHAA+PQHSIDPI+AASNVIVSLQ LVSREADPLDS
Sbjct: 156 SVASRSGPVLAACGFFDAVISGKGGHAALPQHSIDPILAASNVIVSLQQLVSREADPLDS 215

Query: 181 QVVTIAKFQGGEAFNVIPDSVTIGGTFRAFSKESFIQLKQRIEE 224
           QVVT+AKF+GG AFNVIPDSVTIGGTFRAFSKESF+QLKQRIEE
Sbjct: 216 QVVTVAKFKGGGAFNVIPDSVTIGGTFRAFSKESFLQLKQRIEE 259


>GSVIVT01020159001 assembled CDS
          Length = 830

 Score =  307 bits (786), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 150/224 (66%), Positives = 177/224 (79%)

Query: 1   YKYPVAXXXXXXXXXXXEPPFVAIRADMDALALEEAVEWEHKSKVPGKMHACGHDAHVAM 60
           Y++PVA            PPFVA+RADMDAL ++E VEWEHKSKV GKMHACGHDAHVAM
Sbjct: 36  YRWPVARTGVVATIGSGSPPFVALRADMDALPIQEMVEWEHKSKVDGKMHACGHDAHVAM 95

Query: 61  LLGAAKILQDHRNELKGTVVLVFQPAEEGHGGAKRMLDSGVLENIDAIFGLHVSFLHPIG 120
           LLGAAKILQ+ R+EL+GTVVL+FQPAEE   GAK M+  GVLENI+AIFG+H    +P G
Sbjct: 96  LLGAAKILQEIRDELQGTVVLIFQPAEERGVGAKDMIQEGVLENIEAIFGIHTVHGYPTG 155

Query: 121 TVGSRAGPLLAGSGFFEAVISGKGGHAAIPQHSIDPIIAASNVIVSLQHLVSREADPLDS 180
           TV +R+G  LAG G F A ISG+GGHAA PQHSIDPI+A S  ++SLQ++VSRE DPLDS
Sbjct: 156 TVAARSGEFLAGCGGFRAKISGRGGHAASPQHSIDPILAVSTSVISLQNIVSREIDPLDS 215

Query: 181 QVVTIAKFQGGEAFNVIPDSVTIGGTFRAFSKESFIQLKQRIEE 224
           QVV++A   GG AFNVIPD+ TI GTFRAFSK+SF  L++RIEE
Sbjct: 216 QVVSVAMIHGGTAFNVIPDAATITGTFRAFSKKSFYALRERIEE 259



 Score =  299 bits (765), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 145/224 (64%), Positives = 173/224 (77%)

Query: 1   YKYPVAXXXXXXXXXXXEPPFVAIRADMDALALEEAVEWEHKSKVPGKMHACGHDAHVAM 60
           Y++P+A             PFVA+R+DMDAL ++E VEWEHKSKV GKMHACGHDAHVAM
Sbjct: 448 YRWPIAGTGVVATIGSGSQPFVALRSDMDALPIQEMVEWEHKSKVDGKMHACGHDAHVAM 507

Query: 61  LLGAAKILQDHRNELKGTVVLVFQPAEEGHGGAKRMLDSGVLENIDAIFGLHVSFLHPIG 120
           LLGAAKILQ+ R+EL GTVVL+FQPAEE   GAK M+  G LEN++AIFG+H    +P G
Sbjct: 508 LLGAAKILQEIRDELPGTVVLIFQPAEERGVGAKAMIQEGALENVEAIFGVHAVIEYPTG 567

Query: 121 TVGSRAGPLLAGSGFFEAVISGKGGHAAIPQHSIDPIIAASNVIVSLQHLVSREADPLDS 180
           TV +R+G  LAG G F A ISG+GGHAA+PQHSIDPI+A S  +VSLQ++VSRE DPLD 
Sbjct: 568 TVAARSGEFLAGCGGFRAKISGRGGHAAVPQHSIDPILAVSTSVVSLQNIVSRETDPLDH 627

Query: 181 QVVTIAKFQGGEAFNVIPDSVTIGGTFRAFSKESFIQLKQRIEE 224
           QVV++A   GG AFNVIPD+ TI GTFRAFSK+SF  L+ RIEE
Sbjct: 628 QVVSVAMIHGGTAFNVIPDAATITGTFRAFSKKSFYALRDRIEE 671


>GSVIVT01008852001 assembled CDS
          Length = 487

 Score =  294 bits (752), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 141/224 (62%), Positives = 171/224 (76%)

Query: 1   YKYPVAXXXXXXXXXXXEPPFVAIRADMDALALEEAVEWEHKSKVPGKMHACGHDAHVAM 60
           Y++P+A            PPFVA+RADMDAL ++EAVEWEHKSKV GKMHACGHDAHVAM
Sbjct: 142 YRFPLAKTGIRATIGTGGPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAM 201

Query: 61  LLGAAKILQDHRNELKGTVVLVFQPAEEGHGGAKRMLDSGVLENIDAIFGLHVSFLHPIG 120
           LLGAA+IL+   + LKGTVVLVFQPAEE   GAKRM+  G LEN++AIF +HVS  HP  
Sbjct: 202 LLGAARILKAREHHLKGTVVLVFQPAEEAGNGAKRMIGDGALENVEAIFAVHVSHEHPTS 261

Query: 121 TVGSRAGPLLAGSGFFEAVISGKGGHAAIPQHSIDPIIAASNVIVSLQHLVSREADPLDS 180
            +GSR GPLLAG GFF AVI+GK G A  P  S+DP++AAS  ++SLQ +VSREA+PLDS
Sbjct: 262 IIGSRPGPLLAGCGFFRAVITGKEGDAGNPHRSVDPVLAASAAVISLQGIVSREANPLDS 321

Query: 181 QVVTIAKFQGGEAFNVIPDSVTIGGTFRAFSKESFIQLKQRIEE 224
           QVV++    GG++ ++I D+V +GGTFRAFS  SF QL QRIEE
Sbjct: 322 QVVSVTSLNGGDSLDMIADTVVLGGTFRAFSNTSFYQLLQRIEE 365


>GSVIVT01033907001 assembled CDS
          Length = 814

 Score =  262 bits (669), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 129/224 (57%), Positives = 160/224 (71%)

Query: 1   YKYPVAXXXXXXXXXXXEPPFVAIRADMDALALEEAVEWEHKSKVPGKMHACGHDAHVAM 60
           YK+PVA           + P  A+RADMDAL L+E VEWE+KSK+ GKMHACGHD+HVAM
Sbjct: 36  YKWPVAKTGVVASIGSGDQPTFALRADMDALPLQELVEWEYKSKIEGKMHACGHDSHVAM 95

Query: 61  LLGAAKILQDHRNELKGTVVLVFQPAEEGHGGAKRMLDSGVLENIDAIFGLHVSFLHPIG 120
           LLGAAK+LQ  R  LKGTV LVFQP EEG+ GA  ML  G LE++  + GLHV    P G
Sbjct: 96  LLGAAKLLQAKRGMLKGTVKLVFQPGEEGYAGAYHMLKEGALEDVKGMLGLHVIPTVPTG 155

Query: 121 TVGSRAGPLLAGSGFFEAVISGKGGHAAIPQHSIDPIIAASNVIVSLQHLVSREADPLDS 180
            + SRAGPLLAG G F A I GKGGH A P  + DP++AAS  I++LQ +VSRE DPL++
Sbjct: 156 GIASRAGPLLAGVGLFSATIQGKGGHGASPHTAKDPVLAASFAILALQQIVSRETDPLEA 215

Query: 181 QVVTIAKFQGGEAFNVIPDSVTIGGTFRAFSKESFIQLKQRIEE 224
           +VVT+    GGEA NVIP+SV IGGTFR+ + +  + L++RI+E
Sbjct: 216 RVVTVGLVDGGEAGNVIPESVKIGGTFRSLTSQGLLYLQERIKE 259



 Score =  253 bits (647), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 125/224 (55%), Positives = 159/224 (70%)

Query: 1   YKYPVAXXXXXXXXXXXEPPFVAIRADMDALALEEAVEWEHKSKVPGKMHACGHDAHVAM 60
           Y++PVA             P  A+RADMDAL L+E VEWEH+SK+ GKMHACGHD HVAM
Sbjct: 450 YEWPVAKTGVVATIGSGAQPIFALRADMDALPLQELVEWEHRSKIDGKMHACGHDLHVAM 509

Query: 61  LLGAAKILQDHRNELKGTVVLVFQPAEEGHGGAKRMLDSGVLENIDAIFGLHVSFLHPIG 120
           LLGAA++LQ  R  LKGTV LVFQP EEG+ GA  ML  G L+NI+AIFGLHV      G
Sbjct: 510 LLGAARLLQGKREILKGTVKLVFQPGEEGYAGAYHMLQHGALDNINAIFGLHVMPSILTG 569

Query: 121 TVGSRAGPLLAGSGFFEAVISGKGGHAAIPQHSIDPIIAASNVIVSLQHLVSREADPLDS 180
            + SR GP+LAG+G F A + G GGHAA P  + DPI+AAS  IV+LQ +VSRE DPL++
Sbjct: 570 MIASRPGPMLAGAGLFLATVKGIGGHAAGPHQTRDPILAASLAIVALQQIVSRETDPLEA 629

Query: 181 QVVTIAKFQGGEAFNVIPDSVTIGGTFRAFSKESFIQLKQRIEE 224
           +VVT+   +GG+A NVIP+SV  GGT+R+ + +    +++RI+E
Sbjct: 630 RVVTVGFIKGGQAANVIPESVEFGGTYRSLTSQGLSYIQERIQE 673


>GSVIVT01033909001 assembled CDS
          Length = 322

 Score =  234 bits (596), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 117/197 (59%), Positives = 149/197 (75%)

Query: 28  MDALALEEAVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILQDHRNELKGTVVLVFQPAE 87
           MDAL ++E VEWEHKSK  GKMHACGHDAHV MLLGAA++LQ+ R+ELKGTV LVFQP E
Sbjct: 1   MDALPIQELVEWEHKSKYNGKMHACGHDAHVTMLLGAARLLQNKRDELKGTVKLVFQPGE 60

Query: 88  EGHGGAKRMLDSGVLENIDAIFGLHVSFLHPIGTVGSRAGPLLAGSGFFEAVISGKGGHA 147
           EGH GA  +L  G L++  AIFGLHVS   P GTVGS+ GPLLAG+  F AVI GKGGHA
Sbjct: 61  EGHAGAYHVLKEGALDDFQAIFGLHVSPGMPTGTVGSKPGPLLAGAARFSAVIKGKGGHA 120

Query: 148 AIPQHSIDPIIAASNVIVSLQHLVSREADPLDSQVVTIAKFQGGEAFNVIPDSVTIGGTF 207
           A P    DP++AAS  I++LQ +VSRE DPL+++V+T+   + G+A NVIP++V  GGT 
Sbjct: 121 ASPHVGRDPVLAASLAILALQQIVSRETDPLEARVITVGFIEAGQAANVIPETVRFGGTL 180

Query: 208 RAFSKESFIQLKQRIEE 224
           R+ + E  + ++QR+ +
Sbjct: 181 RSLTTEGLLYIQQRVRQ 197


>GSVIVT01038665001 assembled CDS
          Length = 445

 Score =  221 bits (562), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 105/197 (53%), Positives = 139/197 (70%)

Query: 28  MDALALEEAVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILQDHRNELKGTVVLVFQPAE 87
           MDAL L+E VEWEHKSK+ GKMH CGHDAH  MLLGAAK+L   +++LKGTV L+FQPAE
Sbjct: 1   MDALPLQELVEWEHKSKIDGKMHGCGHDAHTTMLLGAAKLLSQRKHKLKGTVRLLFQPAE 60

Query: 88  EGHGGAKRMLDSGVLENIDAIFGLHVSFLHPIGTVGSRAGPLLAGSGFFEAVISGKGGHA 147
           EG  GA+ M+  G L + + IFG+H+    P G++ SR+GP LA    FEA I GKGG A
Sbjct: 61  EGGLGAREMIKVGALGDAEVIFGMHIDHETPTGSIASRSGPFLAAVCSFEARIEGKGGDA 120

Query: 148 AIPQHSIDPIIAASNVIVSLQHLVSREADPLDSQVVTIAKFQGGEAFNVIPDSVTIGGTF 207
           A P  + DPI+AAS  I++LQ L+SRE DPLDSQV+++   +GG   N+ P  V + G+ 
Sbjct: 121 AEPHTNADPILAASFSILALQQLISRELDPLDSQVLSVTTVKGGTTLNLTPSHVVLRGSL 180

Query: 208 RAFSKESFIQLKQRIEE 224
           R+ + E   QL++R++E
Sbjct: 181 RSLTTEGLKQLRKRVKE 197



 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/108 (55%), Positives = 73/108 (67%)

Query: 1   YKYPVAXXXXXXXXXXXEPPFVAIRADMDALALEEAVEWEHKSKVPGKMHACGHDAHVAM 60
           Y +P+A             P VA+RADMDAL L+E VEWEHKSK+ GKMH CGHDAH  M
Sbjct: 337 YTHPLAKTGIVAEIGTGSGPVVALRADMDALPLQELVEWEHKSKIDGKMHGCGHDAHTTM 396

Query: 61  LLGAAKILQDHRNELKGTVVLVFQPAEEGHGGAKRMLDSGVLENIDAI 108
           LLGAAK+L   +++LKGTV  +FQPAEEG  GA  M+  G L + +AI
Sbjct: 397 LLGAAKLLNKRKHKLKGTVRFLFQPAEEGGLGALEMIKEGALGDAEAI 444


>GSVIVT01038664001 assembled CDS
          Length = 239

 Score =  113 bits (282), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 76/114 (66%)

Query: 111 LHVSFLHPIGTVGSRAGPLLAGSGFFEAVISGKGGHAAIPQHSIDPIIAASNVIVSLQHL 170
           +HVS   P G + SR+GPLLA    FEA I GKGG AA P  ++DPI+AAS  I++LQ L
Sbjct: 1   MHVSHEKPTGRIASRSGPLLAAVCTFEARIEGKGGDAAEPHTNVDPILAASLSILALQQL 60

Query: 171 VSREADPLDSQVVTIAKFQGGEAFNVIPDSVTIGGTFRAFSKESFIQLKQRIEE 224
           +SRE D LD QV+++   +GG   N+ P  V +GG+ R+ + E   QL++R++E
Sbjct: 61  ISRELDLLDCQVLSVTSVKGGTTLNLTPSYVVLGGSLRSHTTEGLKQLQKRVKE 114