Jatropha Genome Database

JcCA0291691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0291691.10 + phase: 0 /partial
         (251 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01018950001 assembled CDS                                       339   7e-94
GSVIVT01031980001 assembled CDS                                       261   2e-70
GSVIVT01035484001 assembled CDS                                       125   2e-29
GSVIVT01016751001 assembled CDS                                       125   2e-29
GSVIVT01002654001 assembled CDS                                       117   6e-27
GSVIVT01006039001 assembled CDS                                       116   1e-26
GSVIVT01038796001 assembled CDS                                       111   4e-25
GSVIVT01009036001 assembled CDS                                       107   7e-24
GSVIVT01018184001 assembled CDS                                        54   6e-08
GSVIVT01018934001 assembled CDS                                        53   1e-07

>GSVIVT01018950001 assembled CDS
          Length = 284

 Score =  339 bits (869), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 167/236 (70%), Positives = 183/236 (77%), Gaps = 19/236 (8%)

Query: 16  MKMAGVKPHALEVEQGTVMNFWVPVETVEKAKKGQKINKTQVSLSKPNKPVVVLIHGFAA 75
           MKMAGV+PH +E+E GTVMNFWVP                   L KP KPVVVL+HGFAA
Sbjct: 1   MKMAGVRPHMVEIEPGTVMNFWVP-------------------LRKPTKPVVVLVHGFAA 41

Query: 76  EGIVTWQFQVGALTKKYSVYVPDLLFFGGSITDKTDRSPKFQAETLVKGLRKLGVEKCTV 135
           EGIVTWQFQVGALTKKYSVYVPDLLFFG S TDK+DRSP FQAE L KGLRKLGVEKCT+
Sbjct: 42  EGIVTWQFQVGALTKKYSVYVPDLLFFGDSTTDKSDRSPTFQAECLEKGLRKLGVEKCTI 101

Query: 136 VGFSYGGMVAFKMAELYPEFVEAMVVSGSILAMTDSISEATLSGLGFKSSSELLLPNSVK 195
           VGFSYGGMVAFKMAEL+ + V+A+VVSGSILAMTDSISEATL  LGF SSSELLLP SVK
Sbjct: 102 VGFSYGGMVAFKMAELHQDLVQAVVVSGSILAMTDSISEATLQRLGFASSSELLLPTSVK 161

Query: 196 GXXXXXXXXXXXXXWFPDRLHKDFLEVMFTNRKERAELLDGLVISNKDTTIPTFQQ 251
           G             WFPDRLHKD+LEVMFTNR+ER +LL+ LV+S KDT +P F Q
Sbjct: 162 GLKALLSVAAHKKLWFPDRLHKDYLEVMFTNRQERGDLLEALVVSTKDTNVPNFPQ 217


>GSVIVT01031980001 assembled CDS
          Length = 304

 Score =  261 bits (667), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 135/252 (53%), Positives = 169/252 (67%), Gaps = 16/252 (6%)

Query: 1   MVNLVAAQKPVLQGLMKMAGVKPHALEVEQGTVMNFWVPVETVEKAKKGQKINKTQVSLS 60
           MVN+V  QK ++Q LMK  GV+P  +E+E GTVMNFW P +        QK  +TQ    
Sbjct: 1   MVNIVTLQKSLVQILMKFNGVEPKKVEIEPGTVMNFWAPAK--------QKNEETQ---- 48

Query: 61  KPNKPVVVLIHGFAAEGIVTWQFQVGALTKKYSVYVPDLLFFGGSITDKTDRSPKFQAET 120
              KP VVL+HGF  +GI+TW FQV AL   YSVYVPDLLFFG S T   +RSP+FQAE 
Sbjct: 49  ---KPNVVLVHGFGVDGILTWMFQVLALKSHYSVYVPDLLFFGDSATAAGNRSPRFQAEC 105

Query: 121 LVKGLRKLGVEKCTVVGFSYGGMVAFKMAELYPEFVEAMVVSGSILAMTDSISEATLSGL 180
           L  GLRKLGVE+C VVG SYGGM+ FKMAELYP+ VE+MVVSGS+ A+T+S+S   L  L
Sbjct: 106 LATGLRKLGVERCVVVGLSYGGMIGFKMAELYPDLVESMVVSGSVEALTESLSNRRLKRL 165

Query: 181 GFKSSSELLLPNSVKGXXXXXXXXXXXX-XWFPDRLHKDFLEVMFTNRKERAELLDGLVI 239
           GF+  SE L+P +V+G              W P+ + KD+LEVMF++RKER ELL+ LVI
Sbjct: 166 GFRRWSECLMPTTVEGVKEMFRVGTHWLPPWIPNWIFKDYLEVMFSHRKEREELLEALVI 225

Query: 240 SNKDTTIPTFQQ 251
            ++D T   + Q
Sbjct: 226 RDEDFTPYHYHQ 237


>GSVIVT01035484001 assembled CDS
          Length = 298

 Score =  125 bits (314), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 22/243 (9%)

Query: 12  LQGLMKMAGVKPHALEVEQGTVMNFWVPVETVEKAKKGQKINKTQVSLSKPNKPVVVLIH 71
           L+     +G+    ++++  T ++FW P                    +  +KPV++LIH
Sbjct: 16  LRRCFTASGLSSQTIDIDHQTSIHFWGPN-------------------TASHKPVLLLIH 56

Query: 72  GFAAEGIVTWQFQVGALTKKYSVYVPDLLFFGGSITDKTDRSPKFQAETLVKGLRKLGVE 131
           GF    +  W+ QV      + VYVPDL+FFG S T  +DR+  FQA ++ K L K+G+E
Sbjct: 57  GFGPVCLWQWRRQVQYFCADFDVYVPDLIFFGDSTTTSSDRTEVFQAVSIGKLLEKVGIE 116

Query: 132 KCTVVGFSYGGMVAFKMAELYPEFVEAMVVSGSILAMTDSISEATLSGLGFKSSSELLLP 191
           +  V+G SYGG VA+ MA ++PE VE +V++ S + +    +E  L     K   +L+LP
Sbjct: 117 RYAVMGTSYGGFVAYHMAYMWPERVEKVVIASSAVNLIRRDNEELLQRAKLKEIEDLMLP 176

Query: 192 NSVKGXXXXXXXXXXXXX-WFPDRLHKDFLEVMFT-NRKERAELLDGLVISNKDT-TIPT 248
            + +                 P+ L  D ++ +++ NR+E+  LL GL +  +DT  I  
Sbjct: 177 RTAEQLRTLTSLAVFKRLPTIPNFLWNDIIDKLYSDNREEKKGLLKGLTLGREDTPNISP 236

Query: 249 FQQ 251
            QQ
Sbjct: 237 LQQ 239


>GSVIVT01016751001 assembled CDS
          Length = 337

 Score =  125 bits (314), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 26/214 (12%)

Query: 20  GVKPHALEVEQGTVMNFWVPVETVEKAKKGQKINKTQVSLSKPNKPVVVLIHGFAAEGIV 79
           G+ P  +E++  T ++FW                      S+PN   +VL+HGF   G  
Sbjct: 53  GLSPTTVELDDHTTVHFW---------------TSAHRRFSRPN---LVLVHGFG--GNS 92

Query: 80  TWQFQ--VGALTKKYSVYVPDLLFFGGSITDKTDRSPKFQAETLVKGLRKLGVEKCTVVG 137
            WQF   VG L++ +++YVPDLLFFG S T + +RS  FQA  +V+GLR LGV +C V G
Sbjct: 93  RWQFLQLVGPLSRSFNLYVPDLLFFGKSHTFRRNRSEGFQARCVVEGLRGLGVGRCRVFG 152

Query: 138 FSYGGMVAFKMAELYPEFVEAMVVSGSILAMTDSISEATLSGLGFKSSSELLLPNSVKGX 197
            SYGG VA++MAE++PE VE + ++   +  T+      L  LG +S +E+ LP S K  
Sbjct: 153 ISYGGYVAYRMAEMWPEVVERVAIASCGIGYTEEQKREHLGKLG-RSVTEIFLPESPKNL 211

Query: 198 XXXXXXXXXX---XXWFPDRLHKDFLEVMFTNRK 228
                          W PD   +  ++ M  + +
Sbjct: 212 RRLLNLSIYKFDPLKWAPDFFLQHLIDAMLKDYR 245


>GSVIVT01002654001 assembled CDS
          Length = 298

 Score =  117 bits (292), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 119/236 (50%), Gaps = 21/236 (8%)

Query: 19  AGVKPHALEVEQGTVMNFWVPVETVEKAKKGQKINKTQVSLSKPNKPVVVLIHGFAAEGI 78
           AG++    ++  GTVM+ W+P     KA+K              NKP +VLIHG  A  +
Sbjct: 22  AGLRSTTSDLGDGTVMHCWIP-----KARK-------------ENKPNLVLIHGMGANAM 63

Query: 79  VTWQFQVGALTKKYSVYVPDLLFFGGSITDKTDRSPKFQAETLVKGLRKLGVEKCTVVGF 138
             W   +  L  +++VYVPDL+FFG S T + +RS  FQA+ +++ +   GV +  VVG 
Sbjct: 64  WQWADFIRPLIARFNVYVPDLVFFGDSYTTRPERSESFQAQCVMRMIEGHGVSRMNVVGI 123

Query: 139 SYGGMVAFKMAELYPEFVEAMVVSGSILAMTDSISEATLSGL-GFKSSSELLLPNS-VKG 196
           SYGG VA+++AE +P  VE  V+  + + + +   EA +  +   + ++ +LLP +  K 
Sbjct: 124 SYGGFVAYRIAEQFPAAVERSVLCCAGVCLEEKDMEAGMFQVSSVEDAASILLPQTPEKV 183

Query: 197 XXXXXXXXXXXXXWFPDRLHKDFLEVMFTNR-KERAELLDGLVISNKDTTIPTFQQ 251
                          P     DF++VM T   +ER EL+  L    K + +P   Q
Sbjct: 184 RELMRISFAKPINTMPSCFLNDFIDVMCTEHLQERRELIRALHKDRKLSNLPKITQ 239


>GSVIVT01006039001 assembled CDS
          Length = 279

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 120/236 (50%), Gaps = 21/236 (8%)

Query: 19  AGVKPHALEVEQGTVMNFWVPVETVEKAKKGQKINKTQVSLSKPNKPVVVLIHGFAAEGI 78
           AG++    ++  GTVM+ W+P     K++K              NKP ++LIHG  A  +
Sbjct: 39  AGLRSTTSDLGDGTVMHCWIP-----KSRK-------------ENKPNLLLIHGMGANAM 80

Query: 79  VTWQFQVGALTKKYSVYVPDLLFFGGSITDKTDRSPKFQAETLVKGLRKLGVEKCTVVGF 138
             W   +  L  +++VYVPDL+FFG S T + +RS  FQA+ +++ +   GV +  VVG 
Sbjct: 81  WQWADFIRPLIARFNVYVPDLVFFGDSYTTRPERSESFQAQCVMRMMEGHGVSRMNVVGI 140

Query: 139 SYGGMVAFKMAELYPEFVEAMVVSGSILAMTDSISEATLSGL-GFKSSSELLLPNS-VKG 196
           SYGG VA+++AE +P  VE +V+  + + M +   EA +  +   + ++ +LLP +  K 
Sbjct: 141 SYGGFVAYRIAEQFPAAVERLVLCCAGVCMEEKDMEAGMFQVSSVEDAASILLPQTPEKV 200

Query: 197 XXXXXXXXXXXXXWFPDRLHKDFLEVMFTNR-KERAELLDGLVISNKDTTIPTFQQ 251
                          P     DF++VM T   +ER EL+  L    K + +P   Q
Sbjct: 201 RELVRISFAKPINTMPSCFLNDFIDVMCTEHLQERRELIMALHKDRKLSNLPKITQ 256


>GSVIVT01038796001 assembled CDS
          Length = 311

 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 118/236 (50%), Gaps = 21/236 (8%)

Query: 19  AGVKPHALEVEQGTVMNFWVPVETVEKAKKGQKINKTQVSLSKPNKPVVVLIHGFAAEGI 78
           AG++    ++ +GTVM+ WVP                     +  KP +VL+HGF A  +
Sbjct: 22  AGLRSVLTDLGEGTVMHCWVP------------------KCHRQTKPNLVLVHGFGANAM 63

Query: 79  VTWQFQVGALTKKYSVYVPDLLFFGGSITDKTDRSPKFQAETLVKGLRKLGVEKCTVVGF 138
             + + +    +++++YVPDLLFFG S T + +R+  FQAE ++K +   GV K  +VG 
Sbjct: 64  WQYGYLLRHFIQRFNIYVPDLLFFGRSFTTRPERTEAFQAECVMKMMETHGVRKMNLVGV 123

Query: 139 SYGGMVAFKMAELYPEFVEAMVVSGSILAMTDSISEATLSGLG-FKSSSELLLPNS-VKG 196
           SYGG V + MA  +PE +E +V+  + + + +   E +L  +   + ++  L+P +  K 
Sbjct: 124 SYGGFVGYNMAVQFPEAMERLVLCCTGVCLEEKDMEQSLFAVSDLEEAASTLMPQTPEKL 183

Query: 197 XXXXXXXXXXXXXWFPDRLHKDFLEVMFTNR-KERAELLDGLVISNKDTTIPTFQQ 251
                          P+    DF++VM T+  +E+ ELL  ++   K   +P   Q
Sbjct: 184 RELMKLSFVKPVKGVPNYFLTDFIDVMCTDHVEEKRELLQMILKDRKLINLPKITQ 239


>GSVIVT01009036001 assembled CDS
          Length = 342

 Score =  107 bits (266), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 21/252 (8%)

Query: 3   NLVAAQKPVLQGLMKMAGVKPHALEVEQGTVMNFWVPVETVEKAKKGQKINKTQVSLSKP 62
           +  A +    + +   +G++    ++  GTV++ WVP              KT+    K 
Sbjct: 49  SFTATRDWCYRSIFTKSGLRSTITDLGDGTVIHCWVP--------------KTR----KE 90

Query: 63  NKPVVVLIHGFAAEGIVTWQFQVGALTKKYSVYVPDLLFFGGSITDKTDRSPKFQAETLV 122
           +KP ++LIHGF A  +  W   +  L   ++VYVPDLLFFG S T + +R+  FQA+ ++
Sbjct: 91  SKPNLLLIHGFGANALWQWGDLIPYLVPYFNVYVPDLLFFGDSYTTRPERTESFQAQCVM 150

Query: 123 KGLRKLGVEKCTVVGFSYGGMVAFKMAELYPEFVEAMVVSGSILAMTDSISEATLSGLG- 181
           + +    V+K +++G SYGG V + MA  + E +E +V+ G+ + + +   E  L  +  
Sbjct: 151 RVMEAKSVKKMSLIGLSYGGFVGYSMAAQFKEAIERVVICGAGVCLEEKDLEKGLFKVSH 210

Query: 182 FKSSSELLLPNSV-KGXXXXXXXXXXXXXWFPDRLHKDFLEVMFTNR-KERAELLDGLVI 239
            + ++ +LLP +  K                P  L  DF++VM T   +ER +L+  +  
Sbjct: 211 IEDAASILLPQTPEKLRELLSYTFYKPPRGLPSCLLNDFIQVMCTEFVEERKDLIRAIPK 270

Query: 240 SNKDTTIPTFQQ 251
             K + +PT  Q
Sbjct: 271 DRKLSELPTIPQ 282


>GSVIVT01018184001 assembled CDS
          Length = 317

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 65  PVVVLIHGFAAEGIVTWQFQVGALTKK-YSVYVPDLLFFGGSIT--DKTDRSPKFQAETL 121
           P+V+LIHGF  E   +W +Q+  L K  Y V  PD+  +G S +  D    +       L
Sbjct: 27  PLVLLIHGFP-ELWSSWNYQITHLAKHGYRVVAPDMRGYGDSDSPPDPASYTILHLVGDL 85

Query: 122 VKGLRKLGVEKCTVVGFSYGGMVAFKMAELYPEFVEAMVVSG 163
           +  L +LG EK  VVG  +G  VA+ +  L P+ V+A+V  G
Sbjct: 86  IGLLDQLGEEKAFVVGHDWGAEVAWHLCLLRPDRVKALVNLG 127


>GSVIVT01018934001 assembled CDS
          Length = 367

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 56/125 (44%), Gaps = 19/125 (15%)

Query: 35  NFWVPVETVEKAKKGQKINKTQVSLSKPNKPVVVLIHGFAAEGIVTWQFQVGALTKKYSV 94
           NFW          +G KI+  +     P    +VLIHGF A     W++ +  L K+Y V
Sbjct: 80  NFWT--------WRGHKIHYVEQGEGFP----IVLIHGFGASAF-HWRYNIPELAKRYKV 126

Query: 95  YVPDLLFFGGS---ITDKTDRSPKFQAETLVKGLRKLGVEKCTVVGFSYGGMVAFKMAEL 151
           Y  DLL FG S   I +      K Q E  +K + K   E+  +VG S GG  A   A  
Sbjct: 127 YAIDLLGFGWSDKAIIEYDAMVWKDQVEDFLKEIVK---EQAILVGNSLGGFTALATAAE 183

Query: 152 YPEFV 156
            PE V
Sbjct: 184 LPEQV 188