Jatropha Genome Database

JcCA0289051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0289051.10 - phase: 0 
         (259 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01031067001 assembled CDS                                       406   e-114
GSVIVT01020856001 assembled CDS                                        70   7e-13
GSVIVT01008708001 assembled CDS                                        67   7e-12
GSVIVT01000590001 assembled CDS                                        67   1e-11
GSVIVT01000266001 assembled CDS                                        64   5e-11
GSVIVT01007770001 assembled CDS                                        60   1e-09
GSVIVT01018213001 assembled CDS                                        59   2e-09

>GSVIVT01031067001 assembled CDS
          Length = 535

 Score =  406 bits (1043), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/220 (87%), Positives = 201/220 (91%)

Query: 1   MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFF 60
           MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILT NVSLEY+KSEINAGFF
Sbjct: 193 MVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTSNVSLEYDKSEINAGFF 252

Query: 61  YSNAEQREAMVAAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXX 120
           YS+AEQREAMVAAERRQVDERVK+IIELKNKVCSGNDNNFVVINQKGIDPPS        
Sbjct: 253 YSSAEQREAMVAAERRQVDERVKKIIELKNKVCSGNDNNFVVINQKGIDPPSLDLLARAG 312

Query: 121 XXXXXXXXXXNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNP 180
                     NMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNP
Sbjct: 313 IIALRRAKRRNMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNP 372

Query: 181 HSCTILIKGPNDHTIAQIKDALRDGLRAVKNTIEDQAVVL 220
           HSCTILIKGPNDHTIAQIKDA+RDGLR+VKNT+ED++VVL
Sbjct: 373 HSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTMEDESVVL 412


>GSVIVT01020856001 assembled CDS
          Length = 535

 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 11/208 (5%)

Query: 14  DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVAA 73
           DT L+ G+V+D    HP M +  E+  I       E  K +          E+ + +   
Sbjct: 217 DTELIHGIVVDKDMSHPQMPKHIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQ 276

Query: 74  ERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNME 133
           E++  D+ V++  ++            +VI Q G D  +                   +E
Sbjct: 277 EQKYFDDMVQKCKDV---------GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELE 327

Query: 134 RLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILG--EEKYTFVENVKNPHSCTILIKGPN 191
            + +A GG  V    +LTP+ LG AGLV E   G  +++  ++E   N  + TI ++G N
Sbjct: 328 LIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTKDRMLYIERCANSRAVTIFVRGGN 387

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVV 219
              I + K ++ D L   +N I + ++V
Sbjct: 388 KMIIEETKRSIHDALCVARNIIRNNSIV 415


>GSVIVT01008708001 assembled CDS
          Length = 527

 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)

Query: 14  DTRLVEGLVLDH--GSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMV 71
           D+ L EG +LD   G   P   +R EN  IL  N +++ +K +I       ++  R A +
Sbjct: 206 DSFLDEGFILDKKIGIGQP---KRIENAKILVANTAMDTDKVKIYGARVRVDSMSRVAQI 262

Query: 72  -AAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXX 130
             AE+ ++ E+V++II        G+  N  V  Q   + P                   
Sbjct: 263 EGAEKEKMREKVQKII--------GHGINCFVNRQLIYNFPEELFADAGVLAIEHADFD- 313

Query: 131 NMERLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILGEEKYTFVENVKNPHSCTILIKGP 190
            +ERL L  GGE  ++ D+     LG   L+ E ++GE+K      V+   +CTI+++G 
Sbjct: 314 GIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGA 373

Query: 191 NDHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFP 225
           + H + + + +L D L  +  T+ D  V+L   +P
Sbjct: 374 SFHVLDEAERSLHDALCVLSQTVIDSRVLLGGGWP 408


>GSVIVT01000590001 assembled CDS
          Length = 480

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 11/208 (5%)

Query: 14  DTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVAA 73
           DT L+ G+++D    HP M ++ E+  I       E  K +          E+ + +   
Sbjct: 162 DTELIYGILVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQ 221

Query: 74  ERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNME 133
           E++  D+ V++  ++            +VI Q G D  +                   +E
Sbjct: 222 EQKYFDDMVQKCKDV---------GATLVICQWGFDDEANHLLLHRNLPAVRWVGGVELE 272

Query: 134 RLVLACGGEAVNSVDDLTPDCLGWAGLVYEHILG--EEKYTFVENVKNPHSCTILIKGPN 191
            + +A GG  V    +LT + LG AGLV E   G  +++  ++E+  N  + TI I+G N
Sbjct: 273 LIAIATGGRIVPRFQELTQEKLGKAGLVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGN 332

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVV 219
              I + K ++ D L   +N I   ++V
Sbjct: 333 KMMIEETKRSIHDALCVARNLIRSNSIV 360


>GSVIVT01000266001 assembled CDS
          Length = 557

 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 108/239 (45%), Gaps = 15/239 (6%)

Query: 14  DTRLVEGLVLDHGSRHP-DMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVA 72
           D+++++G++++     P  M+R+  N  I+  +  LEY+K E          E    ++ 
Sbjct: 210 DSKVLKGVMINKDVIAPGKMRRKIVNPRIILLDCPLEYKKGENQTNAELVKEEDWGVLLK 269

Query: 73  AERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNM 132
            E   ++    +I++ K  +         VI +KG+   +                  + 
Sbjct: 270 MEEEYIESICMQILKFKPDL---------VITEKGLSDLACHYLSKAGVSAIRRLRKTDN 320

Query: 133 ERLVLACGGEAVNSVDDLTPDCLG-WAGLVYEHILGEEKYTFVENVKNPHSCTILIKGPN 191
            R+  ACG   VN  D+L    +G  AGL     +G+E + F+ + K+P +CT+L++GP+
Sbjct: 321 NRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGPS 380

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFPHRNLRVGNWIKYFSATDSSIQ--PY 248
              + +++  L+D +   +N I++    LV       L V   +K  S++   I+  PY
Sbjct: 381 KDLLNEVERNLQDAMCVARNIIKNPK--LVPGGGATELTVSATLKQKSSSIEGIEKWPY 437


>GSVIVT01007770001 assembled CDS
          Length = 557

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 15/239 (6%)

Query: 14  DTRLVEGLVLDHGSRHP-DMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREAMVA 72
           D+++++G++++     P  M+R+  N  I+  +  LEY+K E          E    ++ 
Sbjct: 210 DSKVLKGVMINKDVVAPGKMRRKIINPRIILLDCPLEYKKGENQTNAELVREEDWGILLK 269

Query: 73  AERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXXXXXXXXXXXNM 132
            E   ++    +I++ K  +         VI +KG+   +                  + 
Sbjct: 270 MEEEYIENLCMQILKFKPDL---------VITEKGLSDLACHYLSKAGVSAIRRLRKTDN 320

Query: 133 ERLVLACGGEAVNSVDDLTPDCLGW-AGLVYEHILGEEKYTFVENVKNPHSCTILIKGPN 191
            R+  ACG   VN  D+L    +G  AG+     +G+E + F++   +P +CT+L++G +
Sbjct: 321 NRIAKACGAVVVNRPDELQESDVGTRAGIFEVKKIGDEFFAFIDECTDPKACTVLLRGAS 380

Query: 192 DHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFPHRNLRVGNWIKYFSATDSSIQ--PY 248
              + +++  L+D +   +N I++    LV       L V   +K  S++   I+  PY
Sbjct: 381 KDLLNEVERNLQDAMSVARNMIKNPK--LVPGGGATELTVSATLKQKSSSVEGIEKWPY 437


>GSVIVT01018213001 assembled CDS
          Length = 546

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/246 (21%), Positives = 99/246 (40%), Gaps = 17/246 (6%)

Query: 2   VEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFY 61
           + I+    K   D+ L+ G  L+ G     M  R     I   + +L+  K ++      
Sbjct: 198 INILKAHGKSAKDSYLLNGYALNTGRAAQGMPLRVAPARIACLDFNLQRTKMQLGVQVLV 257

Query: 62  SNAEQREAMVAAERRQVDERVKRIIELKNKVCSGNDNNFVVINQKGIDPPSXXXXXXXXX 121
           ++  + E +   E     ER++++++        N    VV+  KGID  +         
Sbjct: 258 TDPRELEKIRQREADMTKERIEKLLK-----AGAN----VVLTTKGIDDMALKYFVEAGA 308

Query: 122 XXXXXXXXXNMERLVLACGGEAVNSVDDLTPD------CLGWAGLVYEHILGEEKYTFVE 175
                    +M  +  A G   V++  D+  D       LG+A  V E  + ++    ++
Sbjct: 309 IAVRRVRKDDMRHVAKATGATMVSTFADMEGDETFDSSFLGYADEVVEERIADDDVIMIK 368

Query: 176 NVKNPHSCTILIKGPNDHTIAQIKDALRDGLRAVKNTIEDQAVVLVSFFPHRNLRVGNWI 235
             K     +++++G ND+ + ++  AL D L  VK T+E   VV         L V  ++
Sbjct: 369 GTKTTSGVSLILRGANDYMLDEMDRALHDALSIVKRTLESNTVVAGGGAVEAALSV--YL 426

Query: 236 KYFSAT 241
           +Y + T
Sbjct: 427 EYLATT 432