Jatropha Genome Database
- JcCA0279321.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0279321.10 - phase: 0 /partial
(157 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01036686001 assembled CDS 172 4e-44
GSVIVT01017774001 assembled CDS 101 1e-22
GSVIVT01010980001 assembled CDS 94 2e-20
GSVIVT01030514001 assembled CDS 94 3e-20
GSVIVT01019119001 assembled CDS 84 3e-17
GSVIVT01023544001 assembled CDS 82 8e-17
GSVIVT01003977001 assembled CDS 79 8e-16
GSVIVT01007563001 assembled CDS 77 3e-15
GSVIVT01019118001 assembled CDS 55 1e-08
>GSVIVT01036686001 assembled CDS
Length = 535
Score = 172 bits (437), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/142 (60%), Positives = 105/142 (73%), Gaps = 5/142 (3%)
Query: 17 VPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPE 76
VP++A E LP+RP EPDCPYF+KT++CK+G CKFNHPKD++ + G E+ D F LPE
Sbjct: 202 VPIVAANEFLPQRPGEPDCPYFMKTQKCKFGHKCKFNHPKDQI-ISLGAPENTDVFVLPE 260
Query: 77 RPSEPTCAFYMKTGKCKFGATCKFHHPKDIQM-QFGQETNNTVQIGSTVTMEGTTGDFNV 135
RPSE CAFY+KTGKCKFGATCKFHHPKDIQ+ G+ + Q + GTTGD
Sbjct: 261 RPSELPCAFYVKTGKCKFGATCKFHHPKDIQIASTGKNNADGEQAETGAKGAGTTGD--- 317
Query: 136 VKASISLTPALGHNSKGLPIRL 157
VK +S+TPAL HNSKGLP+RL
Sbjct: 318 VKLPVSVTPALVHNSKGLPMRL 339
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 37/134 (27%)
Query: 8 DSSLLLAVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLAL------ 61
D L ++V L+ + LP R E DCP++LKT CKYG C++NHP D+ A+
Sbjct: 317 DVKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNHP-DRNAINPPAAA 375
Query: 62 ------FQGGSEDNDGFA------------------------LPERPSEPTCAFYMKTGK 91
+ N G P+RP + C FYMKTG+
Sbjct: 376 IGHAIVASPAANLNVGVVNPVTSILHPIDPRLSQTMGVGPTIYPQRPGQMECDFYMKTGE 435
Query: 92 CKFGATCKFHHPKD 105
CKFG CKFHHP D
Sbjct: 436 CKFGERCKFHHPID 449
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 31/122 (25%)
Query: 12 LLAVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDG 71
++++ P ++ LPERP E C +++KT +CK+G CKF+HPKD + + G + DG
Sbjct: 244 IISLGAPENTDVFVLPERPSELPCAFYVKTGKCKFGATCKFHHPKD-IQIASTGKNNADG 302
Query: 72 F------------------------------ALPERPSEPTCAFYMKTGKCKFGATCKFH 101
LP R E C FY+KTG CK+GATC+++
Sbjct: 303 EQAETGAKGAGTTGDVKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYN 362
Query: 102 HP 103
HP
Sbjct: 363 HP 364
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFAL---PERPSEPT 82
P+RP + +C +++KT CK+G CKF+HP D+ A + N L P R
Sbjct: 418 YPQRPGQMECDFYMKTGECKFGERCKFHHPIDRSAPTATKLQQNIRLTLAGFPRREGTII 477
Query: 83 CAFYMKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQIGSTVTMEGTTGD 132
C FY+KTG CK+G TCKF HP ++ T Q ST E GD
Sbjct: 478 CPFYLKTGTCKYGVTCKFDHPPPGEVM----AMATSQGASTSAGEEANGD 523
>GSVIVT01017774001 assembled CDS
Length = 478
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 24 ESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTC 83
E+ PERP E DC Y+LKT C YG C+FNHP+D+ + GG+ G PER +P C
Sbjct: 44 EAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGV--GGTVRPGGGEFPERVGQPVC 101
Query: 84 AFYMKTGKCKFGATCKFHHPKD 105
FYMKTG CKFGA+CK+HHP+
Sbjct: 102 QFYMKTGTCKFGASCKYHHPRQ 123
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDN---DGFALPERPSEPT 82
PERP +P+C Y+++T CK+G +CK++HP + + N LP RP P
Sbjct: 300 FPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDT-----PKTNCVLSPMGLPLRPGAPQ 354
Query: 83 CAFYMKTGKCKFGATCKFHHP 103
C Y + G CKFG TCKF HP
Sbjct: 355 CTHYAQRGICKFGPTCKFDHP 375
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 74 LPERPSEPTCAFYMKTGKCKFGATCKFHHPKDI 106
PERP +P C +YM+TG CKFG++CK+HHP +
Sbjct: 300 FPERPGQPECQYYMRTGDCKFGSSCKYHHPPEW 332
>GSVIVT01010980001 assembled CDS
Length = 475
Score = 94.4 bits (233), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
Query: 20 IAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLA---LFQGGSEDNDGFALPE 76
++ ES PERP DC Y++KT C +G C++NHP+D+ + L GG E PE
Sbjct: 39 LSSRESYPERPGVADCVYYMKTGFCGFGSRCRYNHPRDRSSVSTLRSGGGE------YPE 92
Query: 77 RPSEPTCAFYMKTGKCKFGATCKFHHPKD 105
R EP C FY+KTG CKFGA+C+FHHP++
Sbjct: 93 RIGEPACQFYLKTGTCKFGASCRFHHPRN 121
Score = 82.4 bits (202), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 8/81 (9%)
Query: 27 PERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDN---DGFALPERPSEPTC 83
PER EP C ++LKT CK+G +C+F+HP++ GGS + + + P R E C
Sbjct: 91 PERIGEPACQFYLKTGTCKFGASCRFHHPRNG-----GGSMSHVSLNIYGYPLRLGEKEC 145
Query: 84 AFYMKTGKCKFGATCKFHHPK 104
++Y+KTG+CKFG TCKFHHP+
Sbjct: 146 SYYLKTGQCKFGITCKFHHPQ 166
Score = 73.9 bits (180), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 8/83 (9%)
Query: 24 ESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDN---DGFALPERPSE 80
+ PERP + +C Y+L+T CK+G +C+++HP++ + + N LP RP
Sbjct: 290 QVFPERPGQQECQYYLRTGDCKFGSSCRYHHPREWVV-----PKTNCVLSPLGLPLRPGV 344
Query: 81 PTCAFYMKTGKCKFGATCKFHHP 103
C FY++ G CKFG+TCKF HP
Sbjct: 345 QPCTFYLQNGYCKFGSTCKFDHP 367
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 74 LPERPSEPTCAFYMKTGKCKFGATCKFHHPKD 105
PERP + C +Y++TG CKFG++C++HHP++
Sbjct: 292 FPERPGQQECQYYLRTGDCKFGSSCRYHHPRE 323
>GSVIVT01030514001 assembled CDS
Length = 450
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 10/88 (11%)
Query: 20 IAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHP--KDKLALFQGGSEDNDGFALPER 77
+ P+RP EPDC Y+L+T C YG NC+FNHP ++ A ++G LPER
Sbjct: 38 VGHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRG--------ELPER 89
Query: 78 PSEPTCAFYMKTGKCKFGATCKFHHPKD 105
+P C +++KTG CK+G+TCK+HHP+D
Sbjct: 90 VGQPDCGYFLKTGTCKYGSTCKYHHPRD 117
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCAF 85
LPER +PDC YFLKT CKYG CK++HP+D+ G + LP R E C++
Sbjct: 86 LPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHG---AGPVSLNIVGLPMRQEEKPCSY 142
Query: 86 YMKTGKCKFGATCKFHHPK 104
YM+TG CKFGA CKFHHP+
Sbjct: 143 YMRTGLCKFGAACKFHHPQ 161
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
Query: 12 LLAVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDG 71
LL+ ++P LPERP +P+C YF+ T CKYG +CK++HPK+++A Q +
Sbjct: 273 LLSSLIP------HLPERPDQPECRYFMSTGSCKYGSDCKYHHPKERIA--QLATNTLGP 324
Query: 72 FALPERPSEPTCAFYMKTGKCKFGATCKFHHP 103
LP RP + C+ Y G CK+G TCKF HP
Sbjct: 325 LGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHP 356
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 74 LPERPSEPTCAFYMKTGKCKFGATCKFHHPKDIQMQFGQET 114
LPERP +P C ++M TG CK+G+ CK+HHPK+ Q T
Sbjct: 281 LPERPDQPECRYFMSTGSCKYGSDCKYHHPKERIAQLATNT 321
>GSVIVT01019119001 assembled CDS
Length = 304
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 17/121 (14%)
Query: 37 YFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCAFYMKTGKCKFGA 96
Y+LKT CK+G CKF+HP+DK + G + P RP E CA+Y++TG+CKFG+
Sbjct: 14 YYLKTGTCKFGATCKFHHPRDKAGI--AGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGS 71
Query: 97 TCKFHHPKDIQMQFGQETNNTVQIGSTVTMEGTTGDFNVVKASISLTPALGHNSKGLPIR 156
TCKFHHP+ M V++ G T ++ + +AS +P S P+
Sbjct: 72 TCKFHHPQPSSMM--------------VSLRGIT-NWPLSRASFIPSPRWQAPSSYAPLM 116
Query: 157 L 157
L
Sbjct: 117 L 117
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCAF 85
PERP +P+C +++KT CK+G C+F+HP+++L G LP RP EP C F
Sbjct: 189 FPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIG--LPLRPGEPLCIF 246
Query: 86 YMKTGKCKFGATCKFHHPKDI 106
Y + G CKFG +CKF HP I
Sbjct: 247 YSRYGICKFGPSCKFDHPMGI 267
>GSVIVT01023544001 assembled CDS
Length = 134
Score = 82.4 bits (202), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 14 AVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFA 73
AV V + + ER +PDC Y+LKT+ CKYG CK++H +D+L G +
Sbjct: 8 AVEVNKVDTISEFLERIGQPDCGYYLKTRTCKYGSICKYHHSRDRL---DAGPVSLNIVG 64
Query: 74 LPERPSEPTCAFYMKTGKCKFGATCKFHH 102
L R E C++YM+TG CKFG CKFHH
Sbjct: 65 LSMRQEEKPCSYYMRTGLCKFGVACKFHH 93
>GSVIVT01003977001 assembled CDS
Length = 417
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 43/163 (26%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDG-------------- 71
P RP DCPY+++T CK+GLNCKFNHP + G +N+G
Sbjct: 56 YPLRPYAQDCPYYVRTGSCKFGLNCKFNHPVTRTGQV-GKERENEGEGLSEKIECKYYLT 114
Query: 72 ----------------------------FALPERPSEPTCAFYMKTGKCKFGATCKFHHP 103
LP R E C +YM+TG C +GA C+FHHP
Sbjct: 115 GGGCKYGNSCRYSHSKETNELATLEYNFLGLPMRVGEKECPYYMRTGSCGYGANCRFHHP 174
Query: 104 KDIQMQFGQETNNTVQIGSTVTMEGTTGDFNVVKASISLTPAL 146
+ + N +G ++ G+ ++ S + P++
Sbjct: 175 DPTSVGGSEPNGNGESVGGFDSLGNHNGESTILNLSGASQPSM 217
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 22 EMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEP 81
++E PERP +P+C YF+KT CKY C+++HPK ++ + + G LP RP +
Sbjct: 295 QVEEFPERPGKPECDYFMKTGDCKYKSACRYHHPKSRVPGLPVCALSDKG--LPLRPGKK 352
Query: 82 TCAFYMKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQIGSTVTMEGTTGDFNVVKASIS 141
C Y G CK+G C F HP + T ++ +GS
Sbjct: 353 ICWHYESYGICKYGRACLFDHPPN-------HTPSSFPVGS------------------K 387
Query: 142 LTPALGHNS 150
L P LGHNS
Sbjct: 388 LDPPLGHNS 396
>GSVIVT01007563001 assembled CDS
Length = 484
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 23 MESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPT 82
+E PERP +P+C YFLKT CK+ CK++HPK+++ + + G LP RP +
Sbjct: 359 IEDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKG--LPLRPDQNI 416
Query: 83 CAFYMKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQ-----IGSTVTMEGT 129
C Y + G CKFG CKF HP + + + Q G +VT +G
Sbjct: 417 CTHYNRYGICKFGPACKFDHPVNYGNSASAPSAESGQDQPPPFGGSVTADGV 468
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHPKDKLALFQGGSEDNDGFALPERPSEPTCAF 85
PERP + +C Y+L+T CK+G C++NH K K + + + LP R E C +
Sbjct: 175 FPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVP--VLELNFLGLPIRMGEKECPY 232
Query: 86 YMKTGKCKFGATCKFHHPKDIQMQFGQETNNTVQIGSTVTMEGTTGDFNVVKASISLTPA 145
YM+TG CK+GA C+F+HP D G E+ + G +V ++G + AS S A
Sbjct: 233 YMRTGSCKYGANCRFNHP-DPTAAGGYESPSGYGNGGSVPLQGAS---QSNMASWSSPRA 288
Query: 146 LGHNSKGLPI 155
L + +PI
Sbjct: 289 LNEPAPFVPI 298
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 26 LPERPREPDCPYFLKTKRCKYGLNCKFNHP---KDKLALFQGGSEDNDGFALPERPSEPT 82
P RP DC ++L+T CK+G NCKFNHP K+++A + ++ + F PERP +
Sbjct: 126 YPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEF--PERPGQTE 183
Query: 83 CAFYMKTGKCKFGATCKFHHPK 104
C +Y++TG CKFG C+++H K
Sbjct: 184 CKYYLRTGGCKFGKACRYNHTK 205
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 72 FALPERPSEPTCAFYMKTGKCKFGATCKFHHPKDIQMQFGQ----------------ETN 115
F P RP C+FY++TG CKFG+ CKF+HP + Q + +T
Sbjct: 124 FQYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTE 183
Query: 116 NTVQIGSTVTMEGTTGDFNVVKASISLTPALGHNSKGLPIRL 157
+ + G +N KA S P L N GLPIR+
Sbjct: 184 CKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRM 225
>GSVIVT01019118001 assembled CDS
Length = 111
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 5 IDKDSSLLLAVVVPLIAEMESLPERPREPDCPYFLKTKRCKYGLNCKFNHPKD-KLALFQ 63
+++D+ + + E PERP EPDC Y+++T C++G+ C+FNHP + KLA+
Sbjct: 24 LNQDAMWQMNLRSSETMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIAT 83
Query: 64 GGSEDNDGFALPERPSEPTC 83
+ PER +P C
Sbjct: 84 ARMKGE----FPERMGQPEC 99
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 66 SEDNDGFALPERPSEPTCAFYMKTGKCKFGATCKFHHPKDIQM 108
SE + PERP EP C++Y++TG C+FG TC+F+HP + ++
Sbjct: 37 SETMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKL 79