Jatropha Genome Database
- JcCA0277981.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0277981.10 - phase: 0
(134 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01015023001 assembled CDS 63 5e-11
GSVIVT01001263001 assembled CDS 55 7e-09
GSVIVT01024152001 assembled CDS 55 1e-08
GSVIVT01009875001 assembled CDS 54 2e-08
GSVIVT01019093001 assembled CDS 53 4e-08
GSVIVT01029567001 assembled CDS 53 5e-08
GSVIVT01038622001 assembled CDS 52 7e-08
GSVIVT01019092001 assembled CDS 50 2e-07
GSVIVT01029558001 assembled CDS 50 2e-07
GSVIVT01024120001 assembled CDS 50 4e-07
GSVIVT01019099001 assembled CDS 48 1e-06
GSVIVT01019101001 assembled CDS 48 1e-06
GSVIVT01025708001 assembled CDS 47 2e-06
GSVIVT01019103001 assembled CDS 47 2e-06
GSVIVT01033868001 assembled CDS 47 4e-06
GSVIVT01024122001 assembled CDS 46 5e-06
GSVIVT01024135001 assembled CDS 46 5e-06
GSVIVT01024125001 assembled CDS 46 5e-06
GSVIVT01031507001 assembled CDS 46 6e-06
GSVIVT01024133001 assembled CDS 45 7e-06
>GSVIVT01015023001 assembled CDS
Length = 163
Score = 62.8 bits (151), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 31 PIDVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYDGALRIACDI 90
P DVP+G++ VYVG ++ + + +YL HPLF+ LL EEFG+ + G L I C+I
Sbjct: 75 PPDVPKGYLAVYVGSELR---RFIIPTSYLTHPLFKVLLEKVEEEFGFDHSGGLTIPCEI 131
Query: 91 HLFQYLIHLLKT 102
F+YL+ +++
Sbjct: 132 ETFKYLMKCMES 143
>GSVIVT01001263001 assembled CDS
Length = 163
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 31 PIDVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYDGALRIACDI 90
P++VP+GH+ VYVG + ++ + Y NHPLF +LLR + + +G+++ G + I C I
Sbjct: 79 PMEVPKGHLAVYVGDSGDHTHRVLVPVLYFNHPLFGELLRNAEKVYGFNHPGGITIPCPI 138
Query: 91 HLFQYLIHLLKTG 103
F+ + + G
Sbjct: 139 TEFEKVKTRIDAG 151
>GSVIVT01024152001 assembled CDS
Length = 122
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 31 PIDVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYDGALRIACDI 90
P DVP GH+ + VG + + A+YLNHP+F+ L + EE+G++ G L I CD
Sbjct: 18 PSDVPAGHVAICVGSGCR---RFIVRASYLNHPVFKALFLEAEEEYGFANHGPLAIPCDE 74
Query: 91 HLFQYLIHLLKTGNPS 106
+F+ ++ ++ S
Sbjct: 75 SVFEEVLRVVSRSESS 90
>GSVIVT01009875001 assembled CDS
Length = 104
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 33 DVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYD-GALRIACDIH 91
DVP+G+ VYVG++ + + + +YLNHP F+DLL + EEFG+ + G L I C I
Sbjct: 33 DVPKGYFAVYVGENQ--KQRFVVPISYLNHPSFQDLLSQAEEEFGFDHPMGGLTIPCKIA 90
Query: 92 LFQYLIHLLKTGN 104
F L L+ N
Sbjct: 91 NFIELTSRLQVNN 103
>GSVIVT01019093001 assembled CDS
Length = 90
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 33 DVPEGHIRVYVGKDVEFQCK-LEMEANYLNHPLFEDLLRISHEEFGYSYD-GALRIACDI 90
DVP+GH VYVG E Q K + +YLNHP F+DLL+ + EEFG+++ G L I C
Sbjct: 21 DVPKGHFAVYVG---EIQKKRFVVPISYLNHPSFQDLLQQAEEEFGFNHSMGGLTIPCKE 77
Query: 91 HLF 93
F
Sbjct: 78 ETF 80
>GSVIVT01029567001 assembled CDS
Length = 143
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 34 VPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYDGALRIACDIHLF 93
VP+G + V VGK+++ + + YL H F LLR + EEFG+ +G L+I C++ +F
Sbjct: 43 VPKGFLAVCVGKELK---RFIIPTEYLGHQAFGVLLREAEEEFGFQQEGVLKIPCEVAVF 99
Query: 94 QYLIHLLKTGNPSVHYMQLSDLISN--FHSDAIFTSTKHPLL 133
+ ++ +++ V ++ + SD T + HP +
Sbjct: 100 EKILEVVEEKRDHVFFLNAEKEMIGCCSSSDCELTPSHHPQM 141
>GSVIVT01038622001 assembled CDS
Length = 116
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 33 DVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYDGALRIACDIHL 92
D+P+G + V VG+ E Q + + Y+NHPLF +LL+ + EE+G+ G + I C +
Sbjct: 28 DIPKGCLAVLVGQGEEQQ-RFVIPVIYINHPLFMELLKEAEEEYGFEQKGPITIPCHVEE 86
Query: 93 FQYLIHLLKTGNP 105
F+Y+ ++ P
Sbjct: 87 FRYVQGMIDKEKP 99
>GSVIVT01019092001 assembled CDS
Length = 97
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 33 DVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYD-GALRIACDIH 91
DVP GH VYVG D + + + + +YLNHP F+DLL+ + EEFG+ + G L I C
Sbjct: 28 DVPRGHFAVYVG-DTQ-KKRFVVPISYLNHPSFQDLLQQAEEEFGFDHPMGGLTIPCKEE 85
Query: 92 LF 93
F
Sbjct: 86 TF 87
>GSVIVT01029558001 assembled CDS
Length = 147
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 34 VPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYDGALRIACDIHLF 93
VP+G + V VGK+++ + + YL H F LLR + EEFG+ +G L+I C++ +F
Sbjct: 43 VPKGFLAVCVGKELK---RFIIPTEYLGHQAFGVLLREAEEEFGFQQEGVLKIPCEVAVF 99
Query: 94 QYLIHLLK 101
+ ++ +++
Sbjct: 100 ERILKVVE 107
>GSVIVT01024120001 assembled CDS
Length = 87
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 34 VPEGHIRVYVGKDVEFQCK-LEMEANYLNHPLFEDLLRISHEEFGYSYD-GALRIACDIH 91
VP+GH VYVG E Q K + +YLNHP F+DLL ++ EEFG+ + G L I C+
Sbjct: 16 VPKGHCAVYVG---EIQKKRFVVPISYLNHPAFQDLLHLAEEEFGFDHPMGGLTIPCEED 72
Query: 92 LF 93
F
Sbjct: 73 AF 74
>GSVIVT01019099001 assembled CDS
Length = 96
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 33 DVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYD-GALRIACDIH 91
+VP+GH VYVG ++E + + + +YLNHP F LL + EEFG+++ G L I C+ H
Sbjct: 27 EVPKGHFAVYVG-EIE-KKRYVVPISYLNHPSFRSLLCQAEEEFGFNHPMGGLTIPCEEH 84
Query: 92 LFQYLIHLLKT 102
F L L+
Sbjct: 85 AFLDLTSQLQA 95
>GSVIVT01019101001 assembled CDS
Length = 134
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 33 DVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYD-GALRIACDIH 91
+VP+GH VYVG +VE + + + +YLNHP F LL + EEFG+++ G L I C H
Sbjct: 65 EVPKGHFAVYVG-EVE-KKRYVVPISYLNHPSFRSLLCQAEEEFGFNHPMGGLTIPCKEH 122
Query: 92 LFQYLIHLLKTG 103
F L L+
Sbjct: 123 AFLDLASRLQAS 134
>GSVIVT01025708001 assembled CDS
Length = 124
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 31 PIDVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYDGALRIACDI 90
P DVP+GH+ VYVG++ + ++ L HPLF+ LL + +E+ ++ L I CD
Sbjct: 45 PRDVPKGHLVVYVGENYT---RFVIKITLLKHPLFKALLDQARDEYDFTAASKLCIPCDE 101
Query: 91 HLFQYLIH 98
++F ++
Sbjct: 102 NIFLSVVR 109
>GSVIVT01019103001 assembled CDS
Length = 163
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 33 DVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYD-GALRIACD 89
DVP+GH+ VYVG DVE + + +YLNHP F LL + EEFG+++ G L I C+
Sbjct: 94 DVPKGHLAVYVG-DVE-KRHYVVPISYLNHPSFRSLLCQAEEEFGFNHPMGGLTIPCN 149
>GSVIVT01033868001 assembled CDS
Length = 125
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 34 VPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYDGALRIACDIHLF 93
P G VYVG++ + + + ++L+HPLF+ LL ++ EFG+ L + C + F
Sbjct: 45 TPTGSFAVYVGEERQ---RFVVPTSFLSHPLFKMLLEKAYNEFGFDQRNGLVVPCSVSTF 101
Query: 94 QYLIHLLKTGNPSVHYMQL 112
Q +++ ++ N + L
Sbjct: 102 QEVVNAVECCNGKFDFGNL 120
>GSVIVT01024122001 assembled CDS
Length = 91
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 33 DVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSY-DGALRIAC 88
DVP+GH VYVG+ + + + +YL HP F+ LL + EEFG+ + G L I C
Sbjct: 26 DVPKGHFPVYVGETQ--KKRFVIPISYLKHPSFQKLLSQAEEEFGFDHPQGGLTIPC 80
>GSVIVT01024135001 assembled CDS
Length = 136
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 33 DVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYD-GALRIACDIH 91
+VP+GH+ VYVG+ + + + +YL HP F++LL + EEFG+ + G L I C
Sbjct: 26 NVPKGHVPVYVGEAQ--KKRFVIPISYLKHPSFQNLLSQAEEEFGFDHPLGGLTIPCREE 83
Query: 92 LF 93
F
Sbjct: 84 AF 85
>GSVIVT01024125001 assembled CDS
Length = 108
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 33 DVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYD-GALRIACDIH 91
+VP+GH+ VYVG+ + + + +YL HP F++LL + EEFG+ + G L I C
Sbjct: 39 NVPKGHVPVYVGETQ--KKRFVIPISYLKHPSFQNLLSQAEEEFGFDHPLGGLTIPCREE 96
Query: 92 LF 93
F
Sbjct: 97 AF 98
>GSVIVT01031507001 assembled CDS
Length = 143
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 31 PIDVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYDGALRIAC 88
P DV EGH V D E + + + N+L HP F LL + EE+G+ ++GAL I C
Sbjct: 52 PADVKEGHFAVIAVDDDEPK-RFVVPLNFLTHPTFLKLLEQAAEEYGFDHEGALTIPC 108
>GSVIVT01024133001 assembled CDS
Length = 107
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 33 DVPEGHIRVYVGKDVEFQCKLEMEANYLNHPLFEDLLRISHEEFGYSYD-GALRIACDIH 91
+VP+GH+ VYVG+ + + + +YL HP F++LL + EEFG+ + G L I C
Sbjct: 26 NVPKGHVPVYVGETE--KKRFVIPISYLKHPSFQNLLSQAEEEFGFDHPLGGLTIPCREE 83
Query: 92 LF 93
F
Sbjct: 84 AF 85