Jatropha Genome Database
- JcCA0275691.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0275691.10 - phase: 0 /partial
(438 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01027802001 assembled CDS 566 e-162
GSVIVT01032651001 assembled CDS 510 e-145
GSVIVT01028733001 assembled CDS 434 e-122
GSVIVT01028732001 assembled CDS 432 e-121
GSVIVT01028321001 assembled CDS 380 e-106
GSVIVT01013421001 assembled CDS 280 8e-76
GSVIVT01027803001 assembled CDS 141 7e-34
GSVIVT01028323001 assembled CDS 139 4e-33
>GSVIVT01027802001 assembled CDS
Length = 542
Score = 566 bits (1459), Expect = e-162, Method: Compositional matrix adjust.
Identities = 294/427 (68%), Positives = 320/427 (74%), Gaps = 60/427 (14%)
Query: 1 MAKE-LQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAE 59
MA+E LQVL+ALD+A+TQ YHFTAI+IAGMGFFTDAYDLF ISLVTKLLGRIYYH
Sbjct: 66 MAREQLQVLSALDLARTQLYHFTAIVIAGMGFFTDAYDLFSISLVTKLLGRIYYH----- 120
Query: 60 KPGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVYGMTLMLMVICSVASGLSFG 119
LFFGWLGDKMGRK VYG+TL+LMV+CSVASGLSFG
Sbjct: 121 -------------------------LFFGWLGDKMGRKSVYGITLILMVVCSVASGLSFG 155
Query: 120 HNAKAIMSTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQXXXXXXXX 179
+ K +M+TLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQ
Sbjct: 156 NERKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 215
Query: 180 XXXXXXXXXXXXXXDAPAYQDDAVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETA 239
+AP+Y+ D V STV QADY+WRIILM GA PAALTYYWRMKMPETA
Sbjct: 216 IVSLIVSAAFDHSFNAPSYEKDPVGSTVKQADYVWRIILMFGAAPAALTYYWRMKMPETA 275
Query: 240 RYTALVAKNAKQAASDMSKVLQVDLEAEEHKVQQLSQDQSNSFGLFSKKXXXXXXXXXXX 299
RYTALVAKNA++AA+DMSKVLQVD+EAEE KV+ N++ L
Sbjct: 276 RYTALVAKNARKAAADMSKVLQVDIEAEETKVE-------NTWFLL-------------- 314
Query: 300 XXXXXXXXDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYRIARAQTLIALCSTVPGY 359
DIAFYSQNLFQKDIFSAIGWIP A+TMNAI EV+RIA+AQTLIALCSTVPGY
Sbjct: 315 --------DIAFYSQNLFQKDIFSAIGWIPKAETMNAIHEVFRIAKAQTLIALCSTVPGY 366
Query: 360 WFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFG 419
W TV ID +GRFAIQLMGFFFMTVFMFALAIPY HWT NRIGFVVMYSLTFFFANFG
Sbjct: 367 WCTVIFIDYMGRFAIQLMGFFFMTVFMFALAIPYHHWTLAPNRIGFVVMYSLTFFFANFG 426
Query: 420 PNATTFV 426
PNATTFV
Sbjct: 427 PNATTFV 433
>GSVIVT01032651001 assembled CDS
Length = 542
Score = 510 bits (1313), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/432 (58%), Positives = 308/432 (71%), Gaps = 2/432 (0%)
Query: 7 VLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPP 66
+ +ALD AKTQ YHF AI+IAGMGFFTDAYDLFCI+ VTKL+GR+YY+ +PG LP
Sbjct: 30 IFSALDNAKTQLYHFKAIVIAGMGFFTDAYDLFCITAVTKLIGRLYYYDPIKNEPGKLPT 89
Query: 67 NVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVYGMTLMLMVICSVASGLSFGHNAKAIM 126
NVS A+ GVA CGTLAGQLFFGWLGDK+GRK VYG+TL+ MV C+VASGLSFG A +++
Sbjct: 90 NVSNAITGVALCGTLAGQLFFGWLGDKLGRKHVYGITLVTMVGCAVASGLSFGSTAHSVI 149
Query: 127 STLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQXXXXXXXXXXXXXXX 186
++LCFFRFWLGFGIGGDYPLSA IMSEYAN+KTRGAFIAAVFAMQ
Sbjct: 150 ASLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGAFIAAVFAMQGIGILVAGAVSMIVS 209
Query: 187 XXXXXXXDAPAYQDDAVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETARYTALVA 246
A + + V ST PQ D++WRI+LM GA+PA LTYYWRMKMPETAR+TALV
Sbjct: 210 KAFLVAYKAEVFSQNHVLSTQPQGDFVWRIVLMFGAVPAMLTYYWRMKMPETARFTALVK 269
Query: 247 KNAKQAASDMSKVLQVDLEAEEHKVQQLSQDQSNSFGLFSKKXXXXXXXXXXXXXXXXXX 306
N ++AA DM+KVL+ D+ EE K ++ S S+GL S++
Sbjct: 270 GNHEKAAVDMAKVLEQDIVVEESK-PKIPVTPSPSYGLLSREFVKRHGLQLLGTTSTWFL 328
Query: 307 XDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYRIARAQTLIALCSTVPGYWFTVALI 366
DIAFYS L QKDI+ AIG +P A TMNAIEEVY+I++A L+AL +TVPGYWFTV LI
Sbjct: 329 LDIAFYSLQLTQKDIYPAIGLVPKASTMNAIEEVYKISKAMFLVALFATVPGYWFTVFLI 388
Query: 367 DKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFGPNATTFV 426
D+IGRF IQL GF M++FM + + + + F V+Y LT FFANFGPN+TTF+
Sbjct: 389 DRIGRFIIQLGGFLLMSIFMACPKESTNEFCEGKPYL-FAVLYGLTLFFANFGPNSTTFI 447
Query: 427 VPAEIVPARLRS 438
VPAE+ PAR RS
Sbjct: 448 VPAELFPARFRS 459
>GSVIVT01028733001 assembled CDS
Length = 575
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/438 (52%), Positives = 284/438 (64%), Gaps = 64/438 (14%)
Query: 1 MAKELQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEK 60
M+ L VL+ALD A+TQWYH TAIIIAGMGFFTDAYDLFCIS ++KLLGR+YY+
Sbjct: 1 MSNSLAVLHALDSARTQWYHITAIIIAGMGFFTDAYDLFCISTISKLLGRLYYY------ 54
Query: 61 PGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVYGMTLMLMVICSVASGLSFGH 120
LP NV+ AV GVA GTL GQL FGWLGDK+GRK+VYG TL+LMV+C++ SGLSFG+
Sbjct: 55 -DPLPHNVNNAVVGVALFGTLTGQLVFGWLGDKLGRKRVYGFTLILMVVCAICSGLSFGY 113
Query: 121 NAKAIMSTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQXXXXXXXXX 180
+ KA++ TLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQ
Sbjct: 114 SPKAVIITLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGMGIIFAGL 173
Query: 181 XXXXXXXXXXXXXDAPAYQDDAVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETAR 240
D V ST +AD++WRI+LM+GALPA LTYYWRMKMPET
Sbjct: 174 --------------------DPVRSTQREADFLWRIVLMLGALPALLTYYWRMKMPET-- 211
Query: 241 YTALVAKNAKQAASDMSKVLQVDLEAEEHKVQQLSQDQSNSFGLFSKKXXXXXXXXXXXX 300
E K +N + L+S++
Sbjct: 212 ---------------------------EFKA-------ANEYSLWSREFFDRHGLHLIGT 237
Query: 301 XXXXXXXDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYRIARAQTLIALCSTVPGYW 360
DIAFYSQNL QKDIF A+ + ++A+ E++ +RA ++AL T PGYW
Sbjct: 238 MSTWFLLDIAFYSQNLTQKDIFPAMNLVNKDYQVSALREMFETSRAMFVVALLGTFPGYW 297
Query: 361 FTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFGP 420
FTV I++IGR+ IQL+GFF M++FM + I Y++ +N+ F V+Y LTFFFANFGP
Sbjct: 298 FTVFFIERIGRYIIQLVGFFMMSLFMLIIGIKYEY-LRDDNKWLFAVLYGLTFFFANFGP 356
Query: 421 NATTFVVPAEIVPARLRS 438
N+TTFV+PAE+ P R+RS
Sbjct: 357 NSTTFVLPAELFPTRVRS 374
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 73/118 (61%), Gaps = 15/118 (12%)
Query: 2 AKELQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKP 61
+ L+ ++ D + QWYH TAIII MGFFTDAYDLFCIS A +P
Sbjct: 433 GRSLEEISGEDGVRIQWYHITAIIIC-MGFFTDAYDLFCIST--------------AWQP 477
Query: 62 GTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVYGMTLMLMVICSVASGLSFG 119
GVA GTL GQL FGWLG+K+GRK+VYG TL+LMVIC++ SGLSFG
Sbjct: 478 TPQRQQCCCRAVGVALVGTLTGQLVFGWLGNKLGRKRVYGFTLILMVICAICSGLSFG 535
>GSVIVT01028732001 assembled CDS
Length = 434
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/438 (51%), Positives = 279/438 (63%), Gaps = 86/438 (19%)
Query: 1 MAKELQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEK 60
M+ L VL+ALD A+TQWYH TAI+IAGMGFFTDAYDLFCIS V+KLLGR+YY+ +K
Sbjct: 1 MSDGLAVLHALDSARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYYDPTKDK 60
Query: 61 PGTLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVYGMTLMLMVICSVASGLSFGH 120
PG LP V+ V GVA GTL+GQL FGWLGDK+GRKKVYGMTL+L+
Sbjct: 61 PGKLPHGVNNFVIGVALVGTLSGQLVFGWLGDKLGRKKVYGMTLILI------------- 107
Query: 121 NAKAIMSTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQXXXXXXXXX 180
FWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQ
Sbjct: 108 -------------FWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGITV--- 151
Query: 181 XXXXXXXXXXXXXDAPAYQDDAVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETAR 240
+ ++ + ST P+ADY+WRI+LM+GALPA LTYYWRMKMPET R
Sbjct: 152 ----------------PFSEEPILSTQPEADYLWRIVLMLGALPALLTYYWRMKMPETGR 195
Query: 241 YTALVAKNAKQAASDMSKVLQVDLEAEEHKVQQLSQDQSNSFGLFSKKXXXXXXXXXXXX 300
YTAL+ NAKQAA+DM +VL+++++AE KV
Sbjct: 196 YTALIEGNAKQAAADMGRVLEIEIQAEADKVAD--------------------------- 228
Query: 301 XXXXXXXDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYRIARAQTLIALCSTVPGYW 360
QNL QKDIF A+ + ++A+ E++ +RA ++AL T PGYW
Sbjct: 229 -------------QNLTQKDIFPAMNLVKKDYEVSALREMFETSRAMFVVALLGTFPGYW 275
Query: 361 FTVALIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFGP 420
FTV ID+IGRF IQL+GFF M++FM + I Y++ +N+ F V+Y LTFFFANFGP
Sbjct: 276 FTVFFIDRIGRFIIQLVGFFMMSLFMLIIGIKYEY-LRDDNKWLFAVLYGLTFFFANFGP 334
Query: 421 NATTFVVPAEIVPARLRS 438
N+TTFV+PAE+ P R+RS
Sbjct: 335 NSTTFVLPAELFPTRVRS 352
>GSVIVT01028321001 assembled CDS
Length = 351
Score = 380 bits (975), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/345 (60%), Positives = 226/345 (65%), Gaps = 79/345 (22%)
Query: 94 MGRKKVYGMTLMLMVICSVASGLSFGHNAKAIMSTLCFFRFWLGFGIGGDYPLSATIMSE 153
MGRK+VYGMTLMLM
Sbjct: 1 MGRKRVYGMTLMLM---------------------------------------------- 14
Query: 154 YANKKTRGAFIAAVFAMQXXXXXXXXXXXXXXXXXXXXXXDAPAYQDDAVASTVPQADYI 213
KTRGAFIAAVFAMQ ADY+
Sbjct: 15 ----KTRGAFIAAVFAMQGFGILAGGLFAII-------------------------ADYV 45
Query: 214 WRIILMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVDLEAEEHKVQQ 273
WRIILMVGALPAALTYY R KMPETARYTALVAKNAK+AASDMSKVLQVD+EAE KV++
Sbjct: 46 WRIILMVGALPAALTYYSRTKMPETARYTALVAKNAKKAASDMSKVLQVDIEAEPQKVEE 105
Query: 274 LSQDQSNSFGLFSKKXXXXXXXXXXXXXXXXXXXDIAFYSQNLFQKDIFSAIGWIPPAKT 333
+++ ++GLFSK+ DIAFYSQNLFQKDIFSAIGWIPPAKT
Sbjct: 106 VTK----AYGLFSKEFVRRHGVHLFGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKT 161
Query: 334 MNAIEEVYRIARAQTLIALCSTVPGYWFTVALIDKIGRFAIQLMGFFFMTVFMFALAIPY 393
MNAI+EVY+IA+AQTLIALCSTVPGYWFTVA ID++GRFAIQLMGFFFMTVFMFALA+PY
Sbjct: 162 MNAIDEVYKIAKAQTLIALCSTVPGYWFTVAFIDRMGRFAIQLMGFFFMTVFMFALALPY 221
Query: 394 DHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIVPARLRS 438
DHWT K+NRIGFVVMYSLTFFFANFGPNATTFVVPAEI PAR RS
Sbjct: 222 DHWTRKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRS 266
>GSVIVT01013421001 assembled CDS
Length = 261
Score = 280 bits (717), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/256 (55%), Positives = 174/256 (67%), Gaps = 7/256 (2%)
Query: 5 LQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVD-GAEKPGT 63
L+VL+ALD AKTQ+YHF AIIIAGMG FTDAYDLFCI + KL+GRIYY + EK
Sbjct: 3 LKVLSALDTAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLIGRIYYEDEPNLEKQYE 62
Query: 64 LPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVYGMTLMLMVICSVASGLSFGHNAK 123
P V + + G+A GT+ GQL FG LGD++GR++VYG++LMLMV+ S+ G S
Sbjct: 63 TPAFVVSLLVGLALLGTVIGQLVFGRLGDQIGRRRVYGLSLMLMVLSSIGCGFSICRTRN 122
Query: 124 AIMSTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQXXXXXXXXXXXX 183
++ TL FFRF LG GIGGDYPLSATIMSE+ANKKTRG+FIAAVF+MQ
Sbjct: 123 CVLGTLGFFRFMLGIGIGGDYPLSATIMSEFANKKTRGSFIAAVFSMQGFGILVSSTVTM 182
Query: 184 XXXXXXXXXXDAPAYQDDAVASTVPQADYIWRIILMVGALPAALTYYWRMKMPETARYTA 243
+A T +AD +WR+ILM GA+PAA+TYYWRM MPETARYTA
Sbjct: 183 VVCSIFNAASNAQYNH------TPEEADLVWRLILMFGAIPAAMTYYWRMMMPETARYTA 236
Query: 244 LVAKNAKQAASDMSKV 259
LV +N QAA DM K+
Sbjct: 237 LVEQNVLQAAKDMEKI 252
>GSVIVT01027803001 assembled CDS
Length = 220
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/96 (73%), Positives = 79/96 (82%), Gaps = 6/96 (6%)
Query: 349 LIALCSTVPGYWFTVALI------DKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENR 402
++ + STVP F +I ++ +FAIQLMGFFFMTVFMFALAIPY+HWTHKENR
Sbjct: 27 ILTVGSTVPQADFVWRIILISRTRERHLQFAIQLMGFFFMTVFMFALAIPYNHWTHKENR 86
Query: 403 IGFVVMYSLTFFFANFGPNATTFVVPAEIVPARLRS 438
IGFVVMYSLTFFFANFGPNATTFVVPAEI PARLRS
Sbjct: 87 IGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRS 122
>GSVIVT01028323001 assembled CDS
Length = 129
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/75 (89%), Positives = 69/75 (92%), Gaps = 1/75 (1%)
Query: 1 MAKE-LQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAE 59
MA+E LQVLNALDVAKT W HFT III GMGFFTDAYDLFCISLVTKLLGR+YYHVDGA
Sbjct: 1 MAREQLQVLNALDVAKTLWCHFTTIIIVGMGFFTDAYDLFCISLVTKLLGRLYYHVDGAS 60
Query: 60 KPGTLPPNVSAAVNG 74
KPGTLPPNVSAAVNG
Sbjct: 61 KPGTLPPNVSAAVNG 75