Jatropha Genome Database
- JcCA0274811.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0274811.20 + phase: 1 /TE/partial
(371 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01006319001 assembled CDS 103 2e-22
GSVIVT01037631001 assembled CDS 95 5e-20
GSVIVT01038695001 assembled CDS 94 8e-20
GSVIVT01014104001 assembled CDS 76 3e-14
GSVIVT01017482001 assembled CDS 56 3e-08
GSVIVT01034745001 assembled CDS 54 9e-08
GSVIVT01028612001 assembled CDS 54 1e-07
GSVIVT01007613001 assembled CDS 53 2e-07
GSVIVT01037342001 assembled CDS 53 2e-07
GSVIVT01021964001 assembled CDS 51 1e-06
GSVIVT01036343001 assembled CDS 49 4e-06
>GSVIVT01006319001 assembled CDS
Length = 604
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 113/203 (55%), Gaps = 24/203 (11%)
Query: 94 LTKLMNFKYQEGTSVADHLSEMQATIHQLSNMGIKFDDKILGLMVLASLPESWETLKISI 153
+ KL N K E SVA HL+E + ++++ I F+D+I L+VLASLP SWET++++I
Sbjct: 1 MKKLFNLKMTENASVAQHLNEF----NTITSVEIDFNDEIRALIVLASLPNSWETMRMAI 56
Query: 154 TNSTPHSGVSWKFVKNAVLNEEMRRKAHNRSSSQSDILLADAK----RNNHPRGRSQSRS 209
+NST + + ++++ +L EE+RR+ + +L + + N RGRS+ R+
Sbjct: 57 SNSTGKENLKYNYIRDLILAEEIRRRNVGETLGSGSVLNLETRGRGNDRNSNRGRSKPRN 116
Query: 210 SNTRDKSRGRSNKFANIMCHHCGKKGHIKRYCWKFKSDQEKIKGKAKKEESSDDEANVIA 269
SN ++ S+ R ++ + C +CGK H +R C K+ K+++ DD ANV+
Sbjct: 117 SN-QNISKSRLDQ--QVQCWNCGKTCHFRRQC------------KSPKKKNEDDSANVVT 161
Query: 270 EFQLFIEYTINHATQETSWVIDS 292
E ++ + + WV+DS
Sbjct: 162 E-EVHDALLLAVDSPLDDWVLDS 183
>GSVIVT01037631001 assembled CDS
Length = 1940
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 146/313 (46%), Gaps = 32/313 (10%)
Query: 75 WDKLEELYAS--KSGNNQLFYLTKLMNFK-YQEGTSVADHLSEMQATIHQLSNMGIKFDD 131
W+ L+E Y + N Q+ L + K +E +V D+ +++ + ++ +G +F +
Sbjct: 814 WEYLKEEYKGDERIKNMQVMNLIREFEMKKMRESDAVKDYAAQLLSIADKVRLLGKEFSN 873
Query: 132 KILGLMVLASLPESWETLKISITNSTPHSGVSWKFVKNAVLNEEMRRKAHNRSSSQSDIL 191
+ + +L +LPE +E S+ NS S +S + +++ E RR +++
Sbjct: 874 EKIVQKILVTLPEKYEATISSLENSKDLSTISLTELLHSLEAVEQRRLMRQGDTAEGAFQ 933
Query: 192 LADAKRNNHPRGRSQSRSSNTRDKSRG---------RSNKFA-------NIMCHHCGKKG 235
K H G+ + S ++ G ++N ++ C+ CGK+G
Sbjct: 934 ARMQKNAGHKNGKVNNNKSCGNNQKNGVFPPCPHCKKTNHSPKKCWWRPDVKCNKCGKQG 993
Query: 236 HIKRYCWKFKSDQEKIKGKAKKEESSDDEANVIAEFQLFIEYTINHATQETSWVIDSGAT 295
H++R C K +++E ++ + E QLF + + SW++DSG T
Sbjct: 994 HVERIC------------KNQQQEETNAVVDYCQEEQLFAATCFANKSTSKSWLVDSGCT 1041
Query: 296 LPATSQRENFSSYTPDNLGVVKIADDKLLKVVGKGDICLETENGSRFNFKDVVHVPDMHS 355
T+ ++ F + V+I + + + V GKG + +E++ G + + DV+ VPD+
Sbjct: 1042 NHMTNNQDLFRELDRTTISKVRIGNGEYIPVKGKGTVAIESQTGLKLIY-DVLFVPDIDQ 1100
Query: 356 NLISVGRLDAENF 368
NL+SVG+L + F
Sbjct: 1101 NLLSVGQLVEKEF 1113
>GSVIVT01038695001 assembled CDS
Length = 740
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 17/278 (6%)
Query: 101 KYQEGTSVADHLSEMQATIHQLSNMGIKFDDKILGLMVLASLPESWETLKISITNSTPHS 160
K +E +V D+ +++ + ++ +G +F ++ + +L +LPE +E + S+ NS S
Sbjct: 14 KMRESDAVKDYAAQLLSIADKVRLLGKEFSNEKIVQKILVTLPEKYEAIISSLENSKDLS 73
Query: 161 GVSWKFVKNAVLNEEMRRKAHNRSSSQSDILLADAKRNNHPRGRSQSRSSNTRDKSRGRS 220
+S + +++ E RR +++ K H G+ ++ S ++ G
Sbjct: 74 TISLTELLHSLEAVEQRRLMRQGDTAEGAFQARMQKNAGHKNGKVNNKKSCGNNQKNGVF 133
Query: 221 NKFANIMCHHCGKKGHIKRYCW----------KFKSDQEKIKGKAKKEESSDDEANVIAE 270
C HC K H + CW + + E+I ++EE+S + E
Sbjct: 134 PP-----CPHCKKTNHSPQKCWWRPDVKCNKCGKQGNMERICKNQQQEETSA-AVDYCQE 187
Query: 271 FQLFIEYTINHATQETSWVIDSGATLPATSQRENFSSYTPDNLGVVKIADDKLLKVVGKG 330
QLF + + SW++DSG T T+ ++ F + V+I + + + V GKG
Sbjct: 188 EQLFAATCFANKSTSKSWLVDSGCTNHMTNNQDLFRELDRTTISKVRIGNGEYIPVKGKG 247
Query: 331 DICLETENGSRFNFKDVVHVPDMHSNLISVGRLDAENF 368
+ +E++ G + + DV+ VPD+ NL+SVG+L + F
Sbjct: 248 TVAIESQTGLKLIY-DVLFVPDIDQNLLSVGQLVEKEF 284
>GSVIVT01014104001 assembled CDS
Length = 1354
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 122/283 (43%), Gaps = 32/283 (11%)
Query: 94 LTKLMNFKYQEGTSVADHLSEMQATIHQLSNMGIKFDDKILGLMVLASLPESWETLKISI 153
+ +L KY + H+ M +L +G+ D+ L VL SLP + KI
Sbjct: 487 MAELTTMKYDGQKGIQQHILNMTEKTAKLKALGMGMDESFLVQFVLNSLPSQFAPFKIHY 546
Query: 154 -TNSTPHSGVSWKF--VKNAVLNEE--MRRKAHNRSSSQSDILLADAKRNNHPRGRSQSR 208
TNS W + + + EE +R++ HN + + + + + R +
Sbjct: 547 NTNSD-----QWNLNELTSKCIQEEVRLRQEGHNLALAVTHGVTKKKGKFKKGRNFP-PK 600
Query: 209 SSNTRDKSRGRSNKFANIMCHHCGKKGHIKRYCWKFKSDQEKIKGKAKKEESSDDEANVI 268
S + S+ KF + C+ CGKKGH+K+ C IK KA E+ + +
Sbjct: 601 KSGPGEGSQNHDGKFT-VSCYFCGKKGHVKKDC---------IKRKAWFEKRGINLS--- 647
Query: 269 AEFQLFIEYTINHA-TQETSWVIDSGATLPATSQRENF-SSYTPDNLGVVKIADDKL-LK 325
F+ Y N A +W IDSGAT T+ + F ++ P ++L ++
Sbjct: 648 -----FVCYESNLAEVPSNTWWIDSGATTHVTNLMQGFLTTRKPKESEKFLYMGNRLKVE 702
Query: 326 VVGKGDICLETENGSRFNFKDVVHVPDMHSNLISVGRLDAENF 368
VV G L E G R + + +VP + NL+S+ +LDA +
Sbjct: 703 VVAVGTYRLLLETGHRMDLLNTFYVPSISRNLVSLSKLDATGY 745
>GSVIVT01017482001 assembled CDS
Length = 216
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 197 RNNHPRGRSQSRSSNTRD----KSRGRSNKFANIMCHHCGKKGHIKRYCWKFKSDQEKIK 252
+ N + +S N R K+ G KF C++C KK H+ + CW K E
Sbjct: 31 KKNEDKAKSSQGERNARVEEDLKNLGTRKKFEG-KCYNCRKKCHMAKDCWSKKGLVESNA 89
Query: 253 GKAKKEESSDDEA--NVIAEFQLFIEYTINHATQETSWVIDSGATLPATSQRE---NFSS 307
+K E+ D + I E FI T E W+IDSG + T +E + S
Sbjct: 90 ATSKSEDEWDAQVFFAAIGE-SAFIATTSEKIDYEKDWIIDSGCSNHMTGDKEKLQDLSE 148
Query: 308 YTPDNLGVVKIADDKLLKVVGKGDICLETE-NGSRFNFKDVVHVPDMHSNLISVGRL 363
Y ++ VV + + K L + G+ + ++ N + + ++V HVP M NL+SV +L
Sbjct: 149 YKGRHM-VVTVNNSK-LPIAHIGNTIVSSQYNTNDVSLQNVYHVPGMKKNLLSVAQL 203
>GSVIVT01034745001 assembled CDS
Length = 2196
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 228 CHHCGKKGHIKRYC---WKFKSDQEKIKGKAKKEESSDDEANVIAEFQLFIEYTINHATQ 284
C+ C K GH ++YC K Q K +E+ +DDE +A L +H +
Sbjct: 274 CNFCNKLGHSEKYCRAKKKQSQQQPKQNANVTEEDKNDDEHLFMASQALSSHELSSH--E 331
Query: 285 ETSWVIDSGATLPATSQRENFSSYTPDNLGVVKIADDKLLKVVGKGDICLETENGSRFNF 344
+W+IDSG T T F+S VK+ + ++++ GKG I + T+ ++
Sbjct: 332 LNTWLIDSGCTSHMTKYLSIFTSIDRSVQPKVKLGNGEVVQAKGKGTIAISTKRRTKI-V 390
Query: 345 KDVVHVPDMHSNLISVGRL 363
+V+++PD+ NL+SV ++
Sbjct: 391 TNVLYIPDLDQNLLSVAQM 409
>GSVIVT01028612001 assembled CDS
Length = 3048
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 15/140 (10%)
Query: 224 ANIMCHHCGKKGHIKRYCWKFKSDQEKIKGKAKKEESSDDEANVIAEFQLFIEYTINHAT 283
A + C++C K GH C +E AK +E E L +N +
Sbjct: 270 ATMECYNCHKLGHFAWEC----PHRETGAYYAKNQE----------EMLLMAYVDLNKTS 315
Query: 284 QETSWVIDSGATLPATSQRENFSSYTPDNLGVVKIADDKLLKVVGKGDICLETENGSRFN 343
+E +W +DSG + +++ FS + VK+ ++ + V+GKG++ L+ ++
Sbjct: 316 REDTWFLDSGCSNHMCGKKDYFSDFDGTFRDSVKLGNNTSMSVLGKGNVRLKVNEMTQI- 374
Query: 344 FKDVVHVPDMHSNLISVGRL 363
V +VP++ +NL+S+G+L
Sbjct: 375 ITGVFYVPELKNNLLSIGQL 394
>GSVIVT01007613001 assembled CDS
Length = 128
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 280 NHATQETSWVIDSGATLPATSQRENFSSYT--PDNLGVVKIADDKLLKVVGKGDICLETE 337
+H + SW+IDSGAT TS+ + F++YT P N +V +A+ L+ VVG GDI +
Sbjct: 17 SHRVYDESWIIDSGATDHMTSKSQLFNTYTPSPSNKKIV-VANGSLVTVVGFGDIYIT-- 73
Query: 338 NGSRFNFKDVVHVPDMHSNL 357
K+V+HVP + +NL
Sbjct: 74 --PTLILKNVLHVPKLSANL 91
>GSVIVT01037342001 assembled CDS
Length = 283
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 288 WVIDSGATLPATSQRENFSSYTPDNLG---VVKIADDKLLKVVGKGDICLETENGSRFNF 344
W+IDSGA++ F+ +TP G +V + D + L V+GKG + L+ + +
Sbjct: 169 WIIDSGASVHICGNIRAFNYFTPIEEGEHRMVLVGDLRPLPVIGKGQVVLKLASNNILVL 228
Query: 345 KDVVHVPDMHSNLISVGRL 363
DV++VP++ NLISV L
Sbjct: 229 NDVLYVPNISLNLISVSSL 247
>GSVIVT01021964001 assembled CDS
Length = 191
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 279 INHATQETSWVIDSGATLPATSQRENFSSYT--PDNLGVVKIADDKLLKVVGKGDICLET 336
++H + SW+IDS AT TS+ + F++YT P N +V +A+ L + G GDI +
Sbjct: 16 VSHRVYDDSWIIDSDATNHMTSKSQLFNTYTLNPSNKKIV-VANGSLATIAGFGDIYIT- 73
Query: 337 ENGSRFNFKDVVHVPDMHSNLISVGRL 363
K+V HVP +NL+S+ +L
Sbjct: 74 ---PTLILKNVHHVPKFSANLVSIQKL 97
>GSVIVT01036343001 assembled CDS
Length = 1201
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 115/292 (39%), Gaps = 42/292 (14%)
Query: 107 SVADHLSEMQATIHQLSNMGIKFDDKILGLMVLASLPESWETLKISITNSTPHSGVSWKF 166
++ +++ +++ L+ +G +K L +L+ L + + S+T T +
Sbjct: 245 TMMEYIQKLKHISDSLAAIGEPVPEKDQILQLLSGLGAEYNPIIASLT--TRDDDIQLHA 302
Query: 167 VKNAVLNEEMRRKAHNRSSSQSDILLADAKRNNHPRGRSQS----------------RSS 210
V + +L E R + ++ D+L+A+ +N PR RSQS R
Sbjct: 303 VHSILLTHEQRLPLQT-TPTEEDLLIANFATHNRPR-RSQSKKPSQGKPPQSFMPTIRPD 360
Query: 211 NTRDKSRGRSNKFANIM-------------CHHCGKKGHIKRYCW-KFKSDQEKIKGKAK 256
D + + C CGK GH+ C+ +F + + + A
Sbjct: 361 TLLDSRQQYPQGYRPNRFNNNRSRTNNRPQCQLCGKFGHMVLSCYHRFDVNYQGPRAPA- 419
Query: 257 KEESSDDEANVIAEFQLFIEYTINHATQETSWVIDSGATLPATSQRENFSSYTPDN-LGV 315
SS + I Q + T SW +DS AT + N + TP N
Sbjct: 420 ---SSTSQIGPIPLAQAMM--AAPSPTLMDSWFLDSSATHHLSHTAANIHNGTPYNGTDS 474
Query: 316 VKIADDKLLKVVGKGDICLETENGSRFNFKDVVHVPDMHSNLISVGRLDAEN 367
V + + K L + G L T + F +V++VP + SNLISV + +N
Sbjct: 475 VMVDNGKSLPITQVGHSFLHT-SAKPFVLHNVLYVPQLTSNLISVSKFCTDN 525