Jatropha Genome Database

JcCA0270781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0270781.10 - phase: 1 /partial
         (478 letters)

Database: grape_pep_20100319 
           26,346 sequences; 9,959,944 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GSVIVT01028441001 assembled CDS                                       614   e-176
GSVIVT01021573001 assembled CDS                                       502   e-142
GSVIVT01021569001 assembled CDS                                       491   e-139
GSVIVT01026388001 assembled CDS                                       456   e-129
GSVIVT01026384001 assembled CDS                                       453   e-128
GSVIVT01000454001 assembled CDS                                       212   3e-55
GSVIVT01026378001 assembled CDS                                       165   6e-41

>GSVIVT01028441001 assembled CDS
          Length = 508

 Score =  614 bits (1583), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 283/476 (59%), Positives = 366/476 (76%), Gaps = 14/476 (2%)

Query: 1   DFIADYYQNIEKHPVLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITHWQSP 60
           DFIADYY++IE  PVLSQVEPGYLR+ LP SAP+ PE+++ +  D+Q  ILPG+THWQSP
Sbjct: 15  DFIADYYKSIENFPVLSQVEPGYLRELLPDSAPNQPESLQQVFDDLQAKILPGVTHWQSP 74

Query: 61  NYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCFLF 120
           N+FAY+ ++ STA FLGEML  G NIVGF+W++SPAATELE IV+DWL ++L LP  FL 
Sbjct: 75  NFFAYYPSNSSTAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPDDFLS 134

Query: 121 SGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQIAGI 180
           +G+GGGVIQGT  EA+L  L+AARD++LR +GK  + KLVVY SDQTHSALQKA QI GI
Sbjct: 135 AGNGGGVIQGTASEAVLVVLLAARDRVLRTVGKTALEKLVVYGSDQTHSALQKACQIGGI 194

Query: 181 NPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLRPLCD 240
           +PEN + +K   ST +ALSPD L   +  DI  GLIP FLCA +GTTS+TAVDPL  L  
Sbjct: 195 HPENCKLLKADSSTGYALSPDLLSEAVSHDITNGLIPFFLCANVGTTSSTAVDPLLELGK 254

Query: 241 VAREYNIWVHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLWVKDP 300
           V +   IW HVDAAYAG+AC+CPE++H++DG+E+A+SF++NAHKW LTN DC  LWVKD 
Sbjct: 255 VTKSNGIWFHVDAAYAGSACVCPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSVLWVKDR 314

Query: 301 NALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRSYGVGNLRTFLR 360
           NAL+++LSTNP +LKNKASD+  V+DYKDWQ+ L RRFRSLKLW+VLR YGV NL+ ++R
Sbjct: 315 NALVQALSTNPVFLKNKASDANMVVDYKDWQVPLGRRFRSLKLWMVLRLYGVENLQRYIR 374

Query: 361 QHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQILPDR-EILANEL 419
            H+++AK FE LV +D RFEIV PR FA+VCFR++P             P R E  +N+L
Sbjct: 375 NHIKLAKQFEELVAQDPRFEIVAPRKFALVCFRLLP-------------PHRNEDFSNKL 421

Query: 420 NRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVVREHANAIL 475
           N  LL+++N++G ++++H  + G Y +R AVGA LTE+ HV  AWKV++E A+ +L
Sbjct: 422 NHNLLDTVNSTGKVYISHTALSGKYTLRLAVGAPLTEERHVNAAWKVIQEKASVLL 477


>GSVIVT01021573001 assembled CDS
          Length = 397

 Score =  502 bits (1293), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/478 (54%), Positives = 319/478 (66%), Gaps = 98/478 (20%)

Query: 1   DFIADYYQNIEKHPVLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITHWQSP 60
           D +ADYY++IEK+PV SQVEPGYLR+ +P  AP  PE IETILQDVQ+ I+PG+THWQSP
Sbjct: 18  DMLADYYRDIEKYPVRSQVEPGYLRQLIPEDAPDYPEPIETILQDVQRDIVPGLTHWQSP 77

Query: 61  NYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCFLF 120
           NYFAYF +SGS A                                     +L+LP  FLF
Sbjct: 78  NYFAYFPSSGSIAG------------------------------------MLRLPESFLF 101

Query: 121 SGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQIAGI 180
           SG+GGGVI GTTCEAILCTL+AARDQML  +G++ I +LVVYASDQTH ALQKAAQ+AGI
Sbjct: 102 SGNGGGVIHGTTCEAILCTLVAARDQMLDRVGRDNILRLVVYASDQTHCALQKAAQVAGI 161

Query: 181 NPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLRPLCD 240
           +P+N R ++TTK   FALSP SLR  I SD E G+IPLFLCAT+GTTS+TAVDP+  LCD
Sbjct: 162 HPDNVRVLQTTKLAAFALSPHSLRSAIISDKEAGMIPLFLCATVGTTSSTAVDPVEALCD 221

Query: 241 VAREYNIWVHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLWVKDP 300
                                   F+HF                                
Sbjct: 222 ------------------------FRHF-------------------------------- 225

Query: 301 NALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRSYGVGNLRTFLR 360
              I +LSTNPEYL+N A++S +V+DYKDWQIALSRRFR++KLWLVLRSYGV NLR+F+R
Sbjct: 226 ---INALSTNPEYLRNGATNSKRVVDYKDWQIALSRRFRAMKLWLVLRSYGVSNLRSFIR 282

Query: 361 QHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQILPDREILANELN 420
           +H+EMAK FE L+  DKRFE+VVPRNF+ VCFR+ P AI   K   Q   D EI+ N LN
Sbjct: 283 RHIEMAKHFEQLIATDKRFEVVVPRNFSTVCFRVSPSAIP--KRFYQNSNDNEIV-NALN 339

Query: 421 RRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVVREHANAILRTS 478
            +LLES+N SG +FMTH +VGGVY +RFAVGA+LTE+ HV MAW+V++++A+AIL TS
Sbjct: 340 SKLLESLNGSGRVFMTHAIVGGVYIIRFAVGASLTEERHVNMAWEVIQQYADAILSTS 397


>GSVIVT01021569001 assembled CDS
          Length = 566

 Score =  491 bits (1263), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 253/467 (54%), Positives = 311/467 (66%), Gaps = 100/467 (21%)

Query: 1   DFIADYYQNIEKHPVLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITHWQSP 60
           DFIA+YY++IEK+PV SQVEPGYL KR+P +AP+NPE IETILQDVQ HI+PG+THW SP
Sbjct: 31  DFIANYYRDIEKYPVRSQVEPGYLHKRIPENAPYNPEPIETILQDVQNHIVPGLTHWLSP 90

Query: 61  NYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCFLF 120
            +FAY+ A+ S A+                         LES               FLF
Sbjct: 91  YHFAYYPANASIAA------------------------SLES---------------FLF 111

Query: 121 SGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQIAGI 180
           SG+GGGVIQGTT +A+LCT+IAARDQ+L  IG+E I KLVVY SDQTH +L KAA+IAGI
Sbjct: 112 SGNGGGVIQGTTGDAVLCTVIAARDQLLNRIGRENIVKLVVYGSDQTHCSLHKAAKIAGI 171

Query: 181 NPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLRPLCD 240
           +P N R++KTTKS  FALSPDSLR  I SD E GLIPL+LCAT+GTTS+ AVDP+ PLCD
Sbjct: 172 HPNNVRSVKTTKSKAFALSPDSLRAAIISDKEAGLIPLYLCATVGTTSSGAVDPVGPLCD 231

Query: 241 VAREYNIWVHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLWVKDP 300
           VA +Y IWVH+DAAYAG+ACICP+                                    
Sbjct: 232 VAEDYGIWVHIDAAYAGSACICPD------------------------------------ 255

Query: 301 NALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRSYGVGNLRTFLR 360
            AL+ + ST+ EYLKN A+DS QV+DYKDWQ+ L+RRFR++KLWLVLRSYGV NLR +LR
Sbjct: 256 -ALVNAFSTDSEYLKNTATDSKQVVDYKDWQVPLTRRFRAIKLWLVLRSYGVVNLRNYLR 314

Query: 361 QHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQILPDREILANELN 420
           +HVEMAK FEGL+  DKRFE+VVPRNF++                          ANELN
Sbjct: 315 RHVEMAKHFEGLIAMDKRFEVVVPRNFSLST------------------------ANELN 350

Query: 421 RRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVV 467
           R+LL+S+N SG + MTH +VGG+Y +RF++G  LT+  H+ MAWKV 
Sbjct: 351 RKLLKSLNDSGLVCMTHAIVGGIYMIRFSIGQPLTDYRHIEMAWKVT 397


>GSVIVT01026388001 assembled CDS
          Length = 448

 Score =  456 bits (1174), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/476 (48%), Positives = 300/476 (63%), Gaps = 100/476 (21%)

Query: 1   DFIADYYQNIEKHPVLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITHWQSP 60
           DFIADYY+N+EK+PV SQV+PGYL    P +AP+ PE +ETIL+DV   I+PG+THWQSP
Sbjct: 26  DFIADYYKNVEKYPVQSQVDPGYLIHHCPDTAPYCPEPLETILKDVSDSIIPGLTHWQSP 85

Query: 61  NYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCFLF 120
           N+F YF A+ STA FLGEMLCTG N+VGFNW++SPAATELESI                 
Sbjct: 86  NFFGYFQANASTAGFLGEMLCTGLNVVGFNWIASPAATELESI----------------- 128

Query: 121 SGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQIAGI 180
                         AI+C+L AARD++L+ IG  KI KLVVY SDQTHS LQKA+++ GI
Sbjct: 129 --------------AIICSLAAARDKVLKKIGHHKITKLVVYGSDQTHSTLQKASKLVGI 174

Query: 181 NPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLRPLCD 240
              NFR++ T+ S  FAL PD +R  ++ DI  GL+PLFLCAT+GTTS+ AVDPL  L  
Sbjct: 175 PTSNFRSLPTSFSNDFALCPDDVRTAMEEDIAAGLVPLFLCATVGTTSSGAVDPLEALGH 234

Query: 241 VAREYNIWVHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLWVKDP 300
           VA+++ +                   H L+G+E A+S ++N HKWLLTN+DCCCLW+K+P
Sbjct: 235 VAKDFKV-------------------HHLNGVELAHSITMNTHKWLLTNMDCCCLWIKEP 275

Query: 301 NALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRSYGVGNLRTFLR 360
              + SLST PE+L+N AS+S +VIDYKDWQIALSRRFR++K+W                
Sbjct: 276 KLFVDSLSTAPEFLRNNASESKKVIDYKDWQIALSRRFRAIKVW---------------- 319

Query: 361 QHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQILPDREILANELN 420
                               +VVPR FA+VCFR+ P   E G+G             ELN
Sbjct: 320 --------------------VVVPRRFALVCFRLRPR--EEGEG------------TELN 345

Query: 421 RRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVVREHANAILR 476
            RLL ++N SG  FMTH +VGG+Y +R A+G+TLTE  HV   WK+++E A  +L+
Sbjct: 346 SRLLMAVNGSGAAFMTHAVVGGIYIIRCAIGSTLTEIRHVDSLWKLIQEKAQLVLQ 401


>GSVIVT01026384001 assembled CDS
          Length = 467

 Score =  453 bits (1166), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/476 (48%), Positives = 297/476 (62%), Gaps = 100/476 (21%)

Query: 1   DFIADYYQNIEKHPVLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITHWQSP 60
           DFIADYY+N+EK+PV SQV+PGYL    P +AP+ PE +ETIL+DV   I+PG+THWQSP
Sbjct: 26  DFIADYYKNVEKYPVQSQVDPGYLMHHCPDTAPYCPEPLETILKDVSDGIIPGLTHWQSP 85

Query: 61  NYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCFLF 120
           N+F YF A+ STA FLGEMLCTG N+VGFNW++SPAATELESI                 
Sbjct: 86  NFFGYFQANASTAGFLGEMLCTGLNVVGFNWIASPAATELESI----------------- 128

Query: 121 SGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQIAGI 180
                         AI+C+L AARD++L+ +G  KI KLVVY SDQTHS LQKA+++ GI
Sbjct: 129 --------------AIICSLAAARDKVLKKLGHHKITKLVVYGSDQTHSTLQKASKLVGI 174

Query: 181 NPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLRPLCD 240
              NFR++ T+ S  FAL PD +R  ++ DI  GL+PLFLCAT+GTTS+ AVDPL  L  
Sbjct: 175 PASNFRSLPTSFSNYFALCPDDVRTAMEEDIGAGLVPLFLCATVGTTSSGAVDPLEALGH 234

Query: 241 VAREYNIWVHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLWVKDP 300
           VA+++ +                   H L+G+E A+S S+N HKWLLTN+DCCCLW+K+P
Sbjct: 235 VAKDFKV-------------------HHLNGVELAHSISMNPHKWLLTNMDCCCLWIKEP 275

Query: 301 NALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRSYGVGNLRTFLR 360
              + SLST PE+L+N AS+S +VIDYKDWQIALSRRFR++K+W                
Sbjct: 276 KLFVDSLSTAPEFLRNNASESKKVIDYKDWQIALSRRFRAIKVW---------------- 319

Query: 361 QHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQILPDREILANELN 420
                                VVPR FA+VCFR              + P  E  + ELN
Sbjct: 320 --------------------AVVPRRFALVCFR--------------LRPREEGESTELN 345

Query: 421 RRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVVREHANAILR 476
            RLL ++N SG  FMTH +VGG+Y +R A+G+TLTE  HV   WK+++E A  +L+
Sbjct: 346 SRLLMAVNGSGAAFMTHAVVGGIYIIRCAIGSTLTETRHVDSLWKLIQEKAQLVLQ 401


>GSVIVT01000454001 assembled CDS
          Length = 210

 Score =  212 bits (540), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 96/193 (49%), Positives = 138/193 (71%), Gaps = 13/193 (6%)

Query: 284 KWLLTNLDCCCLWVKDPNALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKL 343
           +WLL+ LDCCCLW+K  + + +SLS NPEYL NKA++S  V+++KDWQI + RRF++L+L
Sbjct: 25  EWLLSYLDCCCLWIKQLSKITRSLSINPEYLNNKANESDFVVEFKDWQIGIGRRFKALRL 84

Query: 344 WLVLRSYGVGNLRTFLRQHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGK 403
           WLV+RSYGV NL++ +R  ++MAK+F+ +VR D RFEIV PR F++VCFR+ P       
Sbjct: 85  WLVIRSYGVANLQSHIRFDIQMAKLFKSMVRSDPRFEIVTPRLFSLVCFRLNPWP----- 139

Query: 404 GGVQILPDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMA 463
                   R      LNR LL+ IN +G ++M H +V GVY +R AVG+TLTE+ HV+ A
Sbjct: 140 --------RSATGIGLNRMLLDQINTTGSVYMNHTIVDGVYMLRCAVGSTLTEELHVVAA 191

Query: 464 WKVVREHANAILR 476
           WK+++E A+A+ +
Sbjct: 192 WKLIKEEADALTK 204


>GSVIVT01026378001 assembled CDS
          Length = 164

 Score =  165 bits (417), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 75/118 (63%), Positives = 93/118 (78%), Gaps = 4/118 (3%)

Query: 1   DFIADYYQNIEKHPVLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITHWQSP 60
           DFIADYY+N+EK+PV SQV  GYL    P SAP++PE +E+IL++V   I+PG+TH QSP
Sbjct: 26  DFIADYYRNVEKYPVQSQVSSGYLVHHCPDSAPYSPEPLESILKEVSDSIIPGLTHLQSP 85

Query: 61  NYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCF 118
           N+F YF A+ ST  FLGEMLCTG N +GFNW++SPAATELESIVMDW+G+     SCF
Sbjct: 86  NFFGYFQANASTTGFLGEMLCTGLNAIGFNWIASPAATELESIVMDWVGKC----SCF 139