Jatropha Genome Database
- JcCA0266291.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0266291.20 + phase: 1 /pseudo/partial
(119 letters)
Database: grape_pep_20100319
26,346 sequences; 9,959,944 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GSVIVT01008834001 assembled CDS 150 2e-37
GSVIVT01008835001 assembled CDS 145 4e-36
GSVIVT01022353001 assembled CDS 123 2e-29
GSVIVT01024031001 assembled CDS 104 9e-24
GSVIVT01022339001 assembled CDS 101 7e-23
GSVIVT01015203001 assembled CDS 87 1e-18
GSVIVT01009791001 assembled CDS 84 2e-17
GSVIVT01025170001 assembled CDS 83 3e-17
GSVIVT01024221001 assembled CDS 83 3e-17
GSVIVT01020995001 assembled CDS 82 8e-17
GSVIVT01016849001 assembled CDS 80 3e-16
GSVIVT01018853001 assembled CDS 79 6e-16
GSVIVT01018730001 assembled CDS 69 4e-13
GSVIVT01015038001 assembled CDS 69 4e-13
GSVIVT01033736001 assembled CDS 66 3e-12
>GSVIVT01008834001 assembled CDS
Length = 817
Score = 150 bits (378), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 93/119 (78%), Gaps = 4/119 (3%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAGLRRVSLQN---- 56
S HG+ SN F+L+N++ + G N+V+LLS VGLP++GAYLER++AGLRRV +Q+
Sbjct: 513 SQHGSSSNLSFSLDNTVSFRAGINNVSLLSVMVGLPDSGAYLERRVAGLRRVRIQSNGSL 572
Query: 57 KDFTRYEWGYQVGLVGEELQIYTEKGSSNVQWNKFKGSSQRPLTWYKTLFDAPAGNDPV 115
KDFT WGYQVGL+GE+LQIYT+ GS VQW+KF S+ LTWYKT+FDAPAGN+PV
Sbjct: 573 KDFTNNPWGYQVGLLGEKLQIYTDVGSQKVQWSKFGSSTSGLLTWYKTVFDAPAGNEPV 631
>GSVIVT01008835001 assembled CDS
Length = 821
Score = 145 bits (366), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 86/119 (72%), Gaps = 4/119 (3%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAGLRRVSLQN---- 56
SAHG+H N F+L N + L G N ++LLS VGLP+AG YLE K+AG+RRV +Q+
Sbjct: 516 SAHGSHQNGSFSLVNKVPLNSGLNRISLLSVMVGLPDAGPYLEHKVAGIRRVEIQDGGDS 575
Query: 57 KDFTRYEWGYQVGLVGEELQIYTEKGSSNVQWNKFKGSSQRPLTWYKTLFDAPAGNDPV 115
KDF+++ WGYQVGL+GE+ QIYT GS VQW+ + PLTWYKTLFDAP GNDPV
Sbjct: 576 KDFSKHPWGYQVGLMGEKSQIYTSPGSQKVQWHGLGSHGRGPLTWYKTLFDAPPGNDPV 634
>GSVIVT01022353001 assembled CDS
Length = 729
Score = 123 bits (309), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAGLRRVSLQNK--- 57
+ HG+H FT ++ I L N++++LS VG P++GAYLE + AGL RV +Q
Sbjct: 516 ATHGSHDMKGFTFKSPISLNNEMNNISILSVMVGFPDSGAYLESRFAGLTRVEIQCTEKG 575
Query: 58 --DFTRYEWGYQVGLVGEELQIYTEKGSSNVQWNKFKGSSQRPLTWYKTLFDAPAGNDPV 115
DF Y WGYQVGL GE+L IY E+ SNV+W K + S+ +PLTWYK +F+ P+G+DPV
Sbjct: 576 IYDFANYTWGYQVGLSGEKLHIYKEENLSNVEWRKTEISTNQPLTWYKIVFNTPSGDDPV 635
>GSVIVT01024031001 assembled CDS
Length = 833
Score = 104 bits (259), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 69/120 (57%), Gaps = 6/120 (5%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAGLRRVSLQ----- 55
SAHG++ F + K G N +ALL TVGLPN+GAY+E + AG+ V +
Sbjct: 522 SAHGSNVEKNFVFRKPVKFKAGTNYIALLCMTVGLPNSGAYMEHRYAGIHSVQILGLNTG 581
Query: 56 NKDFTRYEWGYQVGLVGEELQIYTEKGSSNVQWNKFKGSSQRPLTWYKTLFDAPAGNDPV 115
D T WG QVG+ GE ++ YT+ GS VQW KG +TWYKT FD P GNDPV
Sbjct: 582 TLDITNNGWGQQVGVNGEHVKAYTQGGSHRVQWTAAKGKGPA-MTWYKTYFDMPEGNDPV 640
>GSVIVT01022339001 assembled CDS
Length = 847
Score = 101 bits (252), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAGLRRVSLQN---- 56
SA GN S+ F E I LK G+ND+ALLS TVGL NAG + E AGL V ++
Sbjct: 520 SASGNGSHSPFKFECPISLKAGKNDIALLSMTVGLQNAGPFYEWVGAGLTSVKIKGLNNG 579
Query: 57 -KDFTRYEWGYQVGLVGEELQIYTEKGSSNVQW-NKFKGSSQRPLTWYKTLFDAPAGNDP 114
D + Y W Y++GL GE L IY +G ++V+W + + Q+PLTWYK + D P+GN+P
Sbjct: 580 IMDLSTYTWTYKIGLQGEHLLIYKPEGLNSVKWLSTPEPPKQQPLTWYKAVVDPPSGNEP 639
Query: 115 V 115
+
Sbjct: 640 I 640
>GSVIVT01015203001 assembled CDS
Length = 833
Score = 87.4 bits (215), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 7/122 (5%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAG-LRRVSLQ---- 55
+ +G SNP T +++ L G N ++LLS +GLPN G + E AG L V+L+
Sbjct: 508 TVYGELSNPKVTFSDNVKLTVGTNKISLLSVAMGLPNVGLHFETWNAGVLGPVTLKGLNE 567
Query: 56 -NKDFTRYEWGYQVGLVGEELQIYTEKGSSNVQWNKFKGSSQR-PLTWYKTLFDAPAGND 113
D + ++W Y++GL GE L + GSS+ +W + +Q+ PLTWYKT F+AP GND
Sbjct: 568 GTVDMSSWKWSYKIGLKGEALNLQAITGSSSDEWVEGSLLAQKQPLTWYKTTFNAPGGND 627
Query: 114 PV 115
P+
Sbjct: 628 PL 629
>GSVIVT01009791001 assembled CDS
Length = 854
Score = 83.6 bits (205), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAG------LRRVSL 54
SA+G N FT + L G N +ALLS VGLPN G + E G L +
Sbjct: 516 SAYGTRENRKFTYTGAANLHAGTNRIALLSIAVGLPNVGLHFETWKTGILGPVLLHGIDQ 575
Query: 55 QNKDFTRYEWGYQVGLVGEELQIYTEKGSSNVQWNK--FKGSSQRPLTWYKTLFDAPAGN 112
+D + +W YQVGL GE + + + G S V+W + Q+PL WYK F+AP G+
Sbjct: 576 GKRDLSWQKWSYQVGLKGEAMNLVSPNGVSAVEWVRGSLAAQGQQPLKWYKAYFNAPEGD 635
Query: 113 DPV 115
+P+
Sbjct: 636 EPL 638
>GSVIVT01025170001 assembled CDS
Length = 846
Score = 82.8 bits (203), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 74/125 (59%), Gaps = 15/125 (12%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAGL----RRVSLQN 56
S GN N T++ + L G+N + LLS TVGL N GA+ +++ AG+ + L N
Sbjct: 521 SGTGNSGNAKVTVDIPVTLIHGKNTIDLLSLTVGLQNYGAFYDKQGAGITGPIKLKGLAN 580
Query: 57 K---DFTRYEWGYQVGLVGEELQIYTEKGSSNVQWNKFKGSS---QRPLTWYKTLFDAPA 110
D + +W YQVGL GEEL + GSS+ +W GS+ ++PL WYKT FDAPA
Sbjct: 581 GTTVDLSSQQWTYQVGLQGEELGL--PSGSSS-KW--VAGSTLPKKQPLIWYKTTFDAPA 635
Query: 111 GNDPV 115
GNDPV
Sbjct: 636 GNDPV 640
>GSVIVT01024221001 assembled CDS
Length = 846
Score = 82.8 bits (203), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAG------LRRVSL 54
SA G + FT + L+ G N +++LS VGLPN G + E G L +
Sbjct: 514 SAFGTREDRRFTFTGDVNLQTGSNIISVLSIAVGLPNNGPHFETWSTGVLGPVVLHGLDE 573
Query: 55 QNKDFTRYEWGYQVGLVGEELQIYTEKGSSNVQWNK--FKGSSQRPLTWYKTLFDAPAGN 112
KD + +W YQVGL GE + + + SN+ W K Q+PLTWYK FDAP G+
Sbjct: 574 GKKDLSWQKWSYQVGLKGEAMNLVSPNVISNIDWMKGSLFAQKQQPLTWYKAYFDAPDGD 633
Query: 113 DPV 115
+P+
Sbjct: 634 EPL 636
>GSVIVT01020995001 assembled CDS
Length = 1064
Score = 81.6 bits (200), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 17 IYLKEGENDVALLSATVGLPNAGAYLERKIAGLR-RVSLQ-----NKDFTRYEWGYQVGL 70
I L +G ND+ LLS TVGL N GA+LE+ AG + +V L D + Y W YQVGL
Sbjct: 741 IQLLQGYNDLVLLSQTVGLQNYGAFLEKDGAGFKGQVKLTGFKNGEIDLSEYSWTYQVGL 800
Query: 71 VGEELQIYTEKGSSNVQWNKFK-GSSQRPLTWYKTLFDAPAGNDPV 115
GE +IY S +W +S TWYKT FDAP G +PV
Sbjct: 801 RGEFQKIYMIDESEKAEWTDLTPDASPSTFTWYKTFFDAPNGENPV 846
>GSVIVT01016849001 assembled CDS
Length = 841
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 11/124 (8%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAG-LRRVSLQ---- 55
+A+G+ NP T + L+ G N +ALLS VGLPN G + E AG L VSL
Sbjct: 515 TAYGSLENPKLTFSQGVKLRAGVNTIALLSIAVGLPNVGPHFETWNAGVLGPVSLNGLNE 574
Query: 56 -NKDFTRYEWGYQVGLVGEELQIYTEKGSSNVQWNKFKGSSQ---RPLTWYKTLFDAPAG 111
+D + +W Y+VGL GE L +++ GSS+V+W +GS +PLTWYKT F+AP G
Sbjct: 575 GRRDLSWQKWSYKVGLKGEALSLHSLSGSSSVEW--VEGSLMARGQPLTWYKTTFNAPGG 632
Query: 112 NDPV 115
N P+
Sbjct: 633 NTPL 636
>GSVIVT01018853001 assembled CDS
Length = 845
Score = 78.6 bits (192), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 8/123 (6%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAG-LRRVSL----Q 55
SA G FT + L G N +ALLS VGLPN G + E G L V+L Q
Sbjct: 515 SAFGTREYRRFTFTEKVNLHAGTNTIALLSVAVGLPNVGGHFETWNTGILGPVALHGLNQ 574
Query: 56 NK-DFTRYEWGYQVGLVGEELQIYTEKGSSNVQWNKFKGSSQR--PLTWYKTLFDAPAGN 112
K D + W Y+VGL GE + + + G S+V W + ++QR PLTW+K F+AP G+
Sbjct: 575 GKWDLSWQRWTYKVGLKGEAMNLVSPNGISSVDWMQGSLAAQRQQPLTWHKAFFNAPEGD 634
Query: 113 DPV 115
+P+
Sbjct: 635 EPL 637
>GSVIVT01018730001 assembled CDS
Length = 447
Score = 69.3 bits (168), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 1 SAHGNHSNPIFTLENSIYLKEGENDVALLSATVGLPNAGAYLERKIAGLRRVSLQ----- 55
+ HG++ F I LK G N +A L ATVGLP++G+Y+E ++AG+ V++Q
Sbjct: 283 TRHGSNVEKSFVFNKPITLKAGLNQIAPLGATVGLPDSGSYMEHRLAGVHNVAIQGLNTR 342
Query: 56 NKDFTRYEWGYQVGLVGEELQIYTEKGSSNV 86
D + WG++VGL G++L ++T+ S +V
Sbjct: 343 TIDLPKNGWGHKVGLNGDKLHLFTQPPSQSV 373
>GSVIVT01015038001 assembled CDS
Length = 835
Score = 68.9 bits (167), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Query: 11 FTLENSIYLKEGENDVALLSATVGLPNAGAYLER---------KIAGLRRVSLQNKDFTR 61
+ E + LK G+N +ALLSAT+G N GA+ + +I G + KD +
Sbjct: 539 YVFEEKVKLKPGKNLIALLSATIGFQNYGAFYDLVQSGISGPVEIVGRKGDETIIKDLSS 598
Query: 62 YEWGYQVGLVGEELQIYTEKGSSNVQWNKFKGSSQRPLTWYKTLFDAPAGNDPV 115
++W Y+VG+ G +++Y + S +W + R LTWYKT F AP G D V
Sbjct: 599 HKWSYKVGMHGMAMKLYDPE--SPYKWEEGNVPLNRNLTWYKTTFKAPLGTDAV 650
>GSVIVT01033736001 assembled CDS
Length = 829
Score = 66.2 bits (160), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 11 FTLENSIYLKEGENDVALLSATVGLPNAGA---YLERKIAGLRRVSLQN------KDFTR 61
F S+ L+ G+N++ LLSATVGL N G + + I G ++ N KD +
Sbjct: 523 FQFRRSVTLQLGKNEITLLSATVGLTNYGPDFDMVNQGIHGPVQIIASNGSADIIKDLSN 582
Query: 62 Y-EWGYQVGLVGEELQIYTEKGSSNVQWNKFKGSSQRPLTWYKTLFDAPAGNDPV 115
+W Y+ GL GE+ +I+ + N QW R WYK FDAP G DPV
Sbjct: 583 NNQWAYKAGLNGEDKKIFLGRARYN-QWKSDNLPVNRSFVWYKATFDAPPGEDPV 636